Chiloscyllium plagiosum (whitespotted bambooshark): 122548761
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Entry
122548761 CDS
T08871
Name
(RefSeq) cadherin-2-like
KO
K06736
cadherin 2, type 1, N-cadherin
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
122548761
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpla03036
]
122548761
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cpla04515
]
122548761
04090 CD molecules [BR:
cpla04090
]
122548761
Chromosome and associated proteins [BR:
cpla03036
]
Eukaryotic type
Centrosome formation proteins
Other centriole associated proteins
122548761
Cell adhesion molecules [BR:
cpla04515
]
Cadherins
Major cadherins
122548761
CD molecules [BR:
cpla04090
]
Proteins
122548761
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Cadherin_3
Stevor
DUF2304
CD34_antigen
DUF5385
Motif
Other DBs
NCBI-GeneID:
122548761
NCBI-ProteinID:
XP_043543463
LinkDB
All DBs
Position
4:complement(5087842..5301077)
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AA seq
864 aa
AA seq
DB search
MWTLGAAALLLLLAAAALRIPVEASELGSCTPGFSEDVYNADVSRTIREGQPLLSVGFDD
CFRGLAVQYETSDRNFKVQRDGVVFATEDMHLSGKQVKFVVTARGMESPGQWQTVVKLTV
RAKGGTKRTGQQNWKPSSAVLSQNVPDIIFPWSQLEHPGHLKRQKRDWVIPPINVPENSR
GPFPQELVTIRSDRDKNRSLRYSVTGPGADQPPAGIFSINPISGQLAVTKPLDREQRASY
HLRAHAVDLNGNQVENPIDIVINVIDMNDNRPEFLHQVWNGSVPEGSKPGTFVMAVTAMD
ADDPNSANGILRYKILSQMPNSPSPNMFTINNQTGDIVTVAAGLDREKVPQYTLIIQATD
MEGSPTYGLSNTATAVIKVTDVNDNPPEFTAATFYGEVPENRIDVIVSNLTITDKDHPHT
AAWNAVYKITGGDPSGHFAVPTDPISNDGLVTVVKPIDYETSRAFVLTVIAVNQEPLTKG
IQLPPQSTATVSITVIDLNESPYFVPNPKLIRQEEGLPAGKVLTVFTAEDPDRYMQQTIR
YSKLLDPANWLKIDPLQGQITTVATLDRESPYVKNNMYNATFLASDSGIPPASGTGTLQI
YLLDVNDNAPHVFPEEVSICEKPDPNAINITATDTDIDPNTGPFAFELPDSPVDIRKNWT
ITRLNGDYAQLRLKIGTLDDGLYKVPIMIMDSGNPPMSATSDLLVKVCPCDENGDCTSVQ
AIVAAGLGTGAIIAILLCIIILLILVLLFVIWMKRRDKERQAKQLLIDPEDDVRDNILKY
DEEGAFCLRKSYKFQGLKAADNDPTAPPYDSLLVFDYEGSGSTAGSLSSLNSTSSGGDQD
YDYLNDWGPRFKKLADMYGGGSDC
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgtggactctcggggcggcggcgctgctgctgctgctggcggcggcggcactgaggata
ccagtggaagcaagtgaacttgggtcatgcacacctggattttcagaagatgtttacaat
gcagacgtttcaaggactattcgtgaagggcagcctcttttgagtgttggctttgatgac
tgtttccggggtttggcagtacagtatgaaacgagcgaccggaacttcaaggtgcaacgt
gatggcgtggtgttcgcaactgaagacatgcatctctctgggaaacaagtgaagtttgtg
gttacggcacggggaatggagagccccggacaatggcaaaccgtcgtcaagttaaccgtg
agagccaaaggtggaaccaaacgcacaggccaacagaactggaagccaagtagtgctgtc
ctatctcagaatgttccggacatcattttcccatggtcccagctggaacatccgggtcat
ctgaaacgccagaagagagactgggtcattccaccaatcaacgttcctgaaaattctcgt
ggtcctttccctcaggaattggtcacgatccgatctgaccgtgataaaaaccgttcgctg
cgctacagcgtcacagggccaggggcagatcaaccaccggccggaatcttcagtatcaat
cccatctccggtcagctagccgtgactaaacctctggatcgggaacagagagcctcatac
catctaagagcccacgcggtggacctgaatgggaatcaagtggaaaatccaatcgacata
gttatcaatgtcatcgatatgaacgataaccggccagagtttctacatcaagtttggaat
ggttctgttccggaagggtcaaagccaggaacgtttgtgatggcagtgactgcaatggac
gctgatgaccctaattccgccaacggcatattaagatacaagattctctcgcaaatgcca
aacagtccgtctccgaatatgttcacaatcaataaccagacgggcgatatcgtcactgta
gcggctggccttgacagagagaaagttccacagtacaccttaatcatccaggccactgat
atggagggtagtcccacgtacggcctgtccaacaccgccactgctgttattaaagtcacc
gacgtcaatgataacccgccagagtttaccgctgccacgttctatggggaagtcccagaa
aatagaattgatgtcattgtttcaaacctgaccataaccgataaggatcaccctcatact
gcggcctggaatgcagtttataagataactggtggagacccttcaggacactttgctgta
ccaactgaccccatcagtaatgacggcctggtaacagttgtcaagcctattgactatgaa
accagcagagcctttgtactaacagtcattgctgtaaatcaggagcctctgacaaaaggc
attcagctccctcctcaatcgacagccactgtctccattaccgttattgatctcaatgag
agtccgtattttgttccaaaccccaagctgatcaggcaggaagagggcctacctgcaggc
aaagtgctcactgtcttcacagctgaggaccctgaccggtacatgcagcagacgatcaga
tactcgaagttattggatccagcaaactggctcaaaatcgatccactccaaggacagatt
accaccgtcgccacactcgatcgtgaatccccttacgttaaaaataacatgtacaacgca
acgttcctggcgtcagacagcggtatccctccggcaagtgggacaggcactctgcagatc
tacctgctcgatgtcaatgacaatgcgccacatgtcttccctgaggaagtctccatttgc
gagaagccggatcccaatgccattaacatcaccgctaccgacaccgatatcgacccaaac
acggggccgtttgcctttgagctccctgacagcccggtggacatcaggaagaactggact
ataacccggctcaatggtgattatgcgcaattgagactgaagattggaaccctcgacgat
ggcctttataaagtgccgatcatgatcatggactctggaaaccctcctatgtctgcgacc
tctgacctccttgtcaaggtgtgtccctgtgatgaaaatggcgactgtacatcagtccag
gcaatagttgcggctggcttggggactggggctatcatcgccattctgctgtgcatcatc
atcctactcatcttagtcttgctgtttgtcatctggatgaagagacgtgacaaggaacgg
caagccaagcagttactcattgacccggaggatgacgtgagggacaacatcctgaaatat
gacgaggagggggcattttgtttacgaaaatcttacaaatttcaggggctgaaggccgca
gacaacgatcccacagcacccccttacgactcactgttggtgttcgactacgagggcagc
ggctccacggcaggatctttgagttcgctcaactccacaagttctggcggagaccaggac
tacgactatctgaatgactggggcccgaggtttaagaagctggcagatatgtacggtggt
ggcagtgactgctag
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