Chiloscyllium plagiosum (whitespotted bambooshark): 122548764
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Entry
122548764 CDS
T08871
Name
(RefSeq) cadherin-7-like
KO
K06799
cadherin 7, type 2
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cpla04515
]
122548764
Cell adhesion molecules [BR:
cpla04515
]
Cadherins
Major cadherins
122548764
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_2
Cadherin_CELSR2_9th
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
122548764
NCBI-ProteinID:
XP_043543467
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All DBs
Position
4:10158816..10297277
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AA seq
764 aa
AA seq
DB search
MLTWCGRWTILIGCAITEYCLIDRAHSGAEPAANQLPSLHRVKRKWVWNQFFVLEEHLET
EPLYIGKLHSDSDNGNGSLRYNLTGDGAGTIFTIDEDNGDIFLLKKLDREEKPFYILRAQ
VVDRETNQYVEPESEFHIKVQDINDNEPQFLDEPYVATVPERSPDGTFVTQVTATDADDP
SYGSHARIVYQILQGQPYFSVEPTTGVIRVASPNTDREAKEQHVVIIEAKDMAGLKGGLS
VTTTVTITLSDVNDNRPKFQHKLYHFSVLESGSIGSTVGRIMATDVDIGQNAEMDYVVEA
GDSSDSFVVFTDRKTQEGVIKLKKPLDYESKGRFNTRVAAINKHIDPRFLNLGPFKDITN
VKINVLDVDEPPVSVSPEYIFKIEENREAGAFVGVVTARDPDAANNSIRYSLDHHRARSF
NVDTKNGTITTLQPLDREEIPWYNLTISASEASNPKKVTSVSVHIQVLDVNDHSPAFPVS
YEAFVCENAKHGQESKVLSIERWEGRAQWSSGPCSEDNTAAVLTQRAGYSRGEQAVHFLP
ILIVDNGAPSLSSTNTLTIRVCKCNNNGVGQLCNAHAFFLPAGLSTGALIAILICALMIL
AFVFLLLVLRRHRKDPRFATERDDIRENIVSYDDEGGGEEDTEAFSMATLRNSQVRRGSR
ARRGVKSDIPSAYRQSLRGMPDQAVFREFVRERLREADSDPSAPPFDSLQMYAFEGTGSV
AGSLSSLASSCSGFDDYYDYLSDWGLCFNTLVDLYGDNGNQPDT
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgctaacctggtgtggacggtggactatcctaataggctgtgcaataacagaatattgt
ctgatagaccgagctcattctggagctgaaccagcagcaaatcagcttccctctctgcat
cgcgtcaagaggaaatgggtgtggaatcagttctttgtattggaagagcatctagaaaca
gagccactctacattggcaagctccactctgattcggacaatgggaatggttctttacga
tataacctgacgggtgatggagctggcacaatcttcaccatcgatgaggacaatggagat
attttcctcttaaagaagctggaccgagaggagaagccattttacatcctgcgggcgcaa
gtggttgacagagaaaccaaccaatatgtagaaccagagtccgagttccacattaaggtc
caggacatcaatgacaatgaaccgcagtttctggatgaaccatacgttgccacggtgcct
gaaaggtcacctgacggaaccttcgttacccaggtgacggcgacagatgcagatgatcct
tcctatggaagtcatgccaggatagtctaccaaatcctgcagggacagccgtacttttca
gtggagccaacaacaggagttattcgagttgcttcgcctaatacagacagagaggccaaa
gaacagcacgtggttattatcgaggctaaagatatggctgggctaaagggaggtctctcc
gtgacaaccaccgtgaccattaccctgtctgatgttaatgacaacagaccgaaattccag
cacaagctgtatcacttctctgttctggagtcaggcagtattggatccaccgtcgggagg
atcatggcgacagacgtcgatattggacaaaatgcagaaatggactacgtggttgaagct
ggcgacagttcagattcatttgttgtatttaccgacaggaagacccaggaaggtgtcatc
aagttaaagaagccattggactatgagagcaaggggagatttaacaccagagtggcagca
atcaacaaacacattgatccccgattcctcaacctcggaccatttaaagatatcacaaat
gtcaaaatcaatgtgctggacgtcgatgagccgccggtctctgtgtctcctgaatacatt
ttcaagattgaagaaaacagagaggctggtgcctttgttggggtggtgacagcaagggac
ccagatgcagcgaacaactcaatcaggtactcccttgatcatcaccgtgccagatctttc
aatgttgatacaaagaatggaaccataaccacattacaaccccttgatcgcgaggagatc
ccttggtacaacttaaccatctcagcatcagaagcaagtaacccgaagaaagtgacttca
gtctcggtgcatattcaggttctcgatgtcaatgatcattctccagcattcccagtttca
tacgaagcatttgtctgtgaaaacgcaaagcatgggcaggagagtaaagttctatccatt
gaacgatgggaaggacgtgctcagtggtcctcaggcccctgcagtgaggataacacggct
gccgttctgacacagagagctggttatagtcgaggagagcaagccgtacacttcttgccc
atcctgatagtggacaatggggctccatcactgagcagcaccaacaccctcactatccga
gtgtgtaagtgcaacaacaatggcgttggccaactgtgcaatgctcatgccttcttcctg
cctgctggcctcagcaccggggctttaatcgccatcctcatctgtgccctgatgatactg
gcatttgtgtttctcctcctggtactccggcggcacaggaaagaccctcgctttgccacc
gaacgcgacgacatccgcgaaaacatcgtcagctacgacgacgaaggtgggggtgaagag
gacacggaagcgttcagcatggccaccttgaggaactctcaggtcaggcgcggctccaga
gcaaggagaggcgtgaagtccgacattccgtcagcttacaggcagtcgctccgtgggatg
ccggatcaagccgtcttccgagagttcgtcagggagaggctgagagaagctgactctgat
ccctcagctcccccattcgattctttgcagatgtacgcatttgaggggaccggctcagtc
gctgggtccttgagttctttggcttcatcctgctcgggtttcgacgattattacgattac
ctcagtgactggggactatgcttcaatacattagtggatctgtacggggataatggaaat
caaccagatacatga
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