Chiloscyllium plagiosum (whitespotted bambooshark): 122548768
Help
Entry
122548768 CDS
T08871
Symbol
lama1
Name
(RefSeq) laminin subunit alpha-1
KO
K05637
laminin, alpha 1/2
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04510
Focal adhesion
cpla04512
ECM-receptor interaction
cpla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122548768 (lama1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122548768 (lama1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
122548768 (lama1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_EGF
Laminin_G_2
Laminin_B
Laminin_N
Laminin_II
Laminin_I
Laminin_G_3
3keto-disac_hyd
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
122548768
NCBI-ProteinID:
XP_043543469
LinkDB
All DBs
Position
4:17589574..17880225
Genome browser
AA seq
3074 aa
AA seq
DB search
MQPRRVGELQGMWPLTVLLLLLCVPAESQQRGLFPAILNLASNAVISTNATCGENGPEMY
CKLVEHVPGRPIRNPQCRICDSNSANRKERHPIVSAIDGTNNWWQSPSIQNGRKYHWVTI
TLDLRQVFQVAYVIIKAANSPRPGNWVLERSIDGVEFTPWQYYATSDTECLTRYNIAPRI
GPPTYKRDDEVICTSYYSRLVPLEHGEIHTSLINGRPSADDPSLTLLAFTSARYIRLLLQ
RIRTLNADLMTLGFRDPREVDPIVTRRYYYSIKDISVGGMCICYGHARSCPWDETLMRLQ
CQCEHNTCGESCNECCPGYHQKPWQSGTFASDNTCEKCNCHDKAEDCYYDQSVADRKLSL
NIHGQYNGGGVCINCTNNTAGINCETCIDGFYRPHKVSPFDHDPCLPCDCNPAGSINATC
VKDDNHALIERGLFPGQCHCQDGYTGKTCSHCAPGFKGFPSCARCNCSVAGSINDDPCAE
PCQCKRNVEGENCNQCKPGFYNLQERNPEGCTECFCFGLSGVCESISWSITQVTDVNGWQ
VTDRQGIKRIQSYQDLYGGPIRMNVNSTEATKSLPALYYWTAPELYLGNKLTAYGGYLKF
TVLYDFPVESSVNEAISNIDVIIEGNGRTLSTGSEGLLLQPYDEKLVSVRLLPENFVDLN
TNNAIDRDRLMTVLVNVTRLQIRVMYNVAKQAVYRLSSVTLDVANPNAIDILPAVDVEHC
ECPPDYSGISCESCSPGFYRVDGILFGGICQQCECNGHAIECDTNGTCLGCQHNTTGRNC
DQCSLGLYGDASRGTSEDCQPCACPLNISSNNFSPTCYLNKTGSIICDQCQPGYTGTRCN
RCADGYYGNPTTPGESCVPCDCNGNVEVSVPGNCDTVTGECLKCIGNTAGIRCEQCAEGF
FGDAVVAKNCRTCDCNVNGSYGEACDPKTGHCQCKSNVLGQKCDHCLHGYFGLSTGLGCV
PCNCSQFGSLSEDCSDDGLCRCVPGVSGEKCDRCAHGFYGFQDGGCTPCDCAHTRNNCAE
DSGQCICPAHTYGDKCEHCETNYWGHDPESGCKFCNCSVVGSVGLQCDRVSGQCSCKEEF
GGEKCSKCTVGHRGYPQCTACKCNLSGTRPEKCDLTKGVCSCEEHTGLCPCKDSVSGVHC
DECRPGSFALSLQHPGGCSRCYCSGVSNSCSELQGLVRIPLTLTPDQLRMRVVTQGNLTG
TREGVFAQPPETLLDAALVQRHLQTEPYYWSLPAQFTGTKLLAYGGKLRYVVAFYALEDS
GSLNLEPQILLKGYHNSKMVIYRNMPTPANGEQIRHMIDLTEHEWKYFNSVSDQPVTRPD
FMSVLSNVEYFLIKASYGTGLQQSRISNISMEIAIEDDGTHALRDRARQIEICDCPPGNA
GLSCQECAPGFYRQKMTDGLQSLNTVCVSCKCNNHSNICDLDTGKCQACRDNTTGDHCEL
CASGYYGRVGGSITDCSLCACPRSHSGSFSPTCVLEGVSDFRCNSCLIGYEGQYCERCAP
GYYGSPRVPGGRCQRCECNPNGSVHINCHPLMGHCVCKPGVTGRLCNQCEAKHVLVESEC
ISCDDDCTGLLLSDLSNLETILMTLNVTGFDPAPYNLFTDIENRTEQYKVALELADGHNL
DEAVGRTLTRGLELAVFVNKTTKTINALVDMANHLNETLGTDLNLSDTKLQQLQHEILNM
LESMRNRVFNHSKEISEMELKAAQDLLASVQKEFQKPHKELKDLKIRVKDMLVQRANGLQ
EAQKLVNEARSNTDESSRMLLSITSGLRELQEKQQTVRSIKTLTTSLIQDGREMLDTAAN
MTQDIVNNTAFLEQYSDQLDLWNTKMRMHLDKLVMEMTQKSVLSLVYKAEDHAEELSEIA
NLLNSSLAAVRNMSLNATVAINTHSNIKALIDEAASIALEARNKADAALKLAISPQKPLE
EFGRKSAQRSSEILSDANDLKNRTAGLVNQLNGLKGKVDQIQKGVGNVSRHLNKPWRILA
QLPNGTDARFQEAKDRAVSANLTAAATLAEIQQFSQQLLSTSGSVARVNKTVRETNDLIS
DSAKTAAAAGKKVQEVEVQANYLLEKLKPLKVLEENLNRNLSEIKELISQARKQAASIKV
AVSANHDCVRAYQPAVTSSNYNTLTLNVKTSESENLLFYLGSSTSTEFLAVEMRHGRVVF
LWDVGSGTTRLEYPDLQINNNKWYRIHAARFGRMGTLSVQEVGASSLDKPVVKTASSPGT
STVLDVDNTTLVFVGGLSKQMKKVAAVRITHFKGCLGEAFLDGKSIGLWNFRGREGSCSG
CFARSQNEDIAFHFDGSGYSAVEKVLRSTTTQLVMQFSTFSPNGLLLYLASNGTRDFLAV
ELADGKVRVTFDLGSGVLTLMSEKRYNNGTWFKIAFQRNRKLGILAVMDPFNSTDRETKQ
GESPGTASDLNRGNKDPIYVGGLPRSRSYRKEVLSKSFVGCLKKLEIYRSTFDLLRNSLG
VRKGCLLEPIRSVTVWNDGYIQLQPQVLPVEARLMTTFSTQNDTGIILAGFGKSTRNRNR
RQTKMAFFAVMMIDGRVEAHVNTGDGVHTRRVIAKSPSGTFSDGQEHSIILSRSKRIMTL
QIDEGNRLEMRLGASADTSPLNITRFYVGGVPTGEGAIVLKITSSFTGCIKNLVLNTELL
DFSGVLRYQNIDLDSCLLSAPEPDKRDLELVLQPTAKPIQPPVRNTSPTHSPYSSSSNKK
TCTVDKLPGYVANAHQFGLSKGSHMILSLDETTVKRKFVIQLNIRTYASNGLIYYMAHQN
QIDYATLQLWKGQLHFLFNLGKGTATSIMPTPINDGKWHTVKTEYVKRRGLITVDGKESN
PALGDGNSLDVEGRLYLGGLPLDYTARKIGNATHSIPACIGNVALNNKPLDLERPVSILT
VSRCYLAVQEGTFFDGTGFAALVKEGYKVRSDVIVTFEFRSTTRNAVLLGISSAKVDAIG
LEIVNGKVLFHVNNGAGRITARYEPKDSNQLCNGKWHKLRANKSKHRITLTVDGVTVQAD
NPHIQSTSADTNDPIYVGGYPANVKQNCLTLQEPFQGCIRNLKLTKNQQIQAFDFSKAFD
LRGVFPHSCPGIEQ
NT seq
9225 nt
NT seq
+upstream
nt +downstream
nt
atgcagcccaggagagtgggagagctgcagggaatgtggccgctgacggtgctcctgtta
ctcctttgtgtccctgcggaatctcagcagagaggactattcccggcaatcctgaatctt
gccagtaatgcggtgatctccaccaatgcaacgtgtggtgaaaatggtcctgagatgtac
tgtaagctggtggagcatgttcccgggcgaccaatacgcaacccacaatgtcgtatttgt
gactcgaacagtgcaaatcgcaaagagcgacatcctatcgtgagtgctatagatggtacc
aacaactggtggcagagtcccagcatccagaatgggaggaagtatcactgggtgacaatt
accctggacctgagacaggtatttcaagtagcctatgtcatcattaaggcagcaaactct
cctcggcctgggaactgggtgttggaacgctccattgatggtgtggagttcacaccctgg
cagtactacgccacaagtgataccgagtgcctgacccgttacaacatcgcacctcggatc
ggaccaccaacctacaagagggatgatgaagtgatctgcacatcttactattccagactc
gtcccgctagagcacggagagattcatacgtccctaatcaatggcaggccgagtgctgat
gatccttccctcactttgttggcgtttacctcggcccgttatatccgtctcctccttcag
cgcatcagaacactcaacgctgacctcatgacccttggcttccgtgaccctcgggaagtt
gatccaattgtcactcgcagatattattattccatcaaggacatctctgttggaggcatg
tgtatctgttatggtcatgcacgcagctgtccgtgggatgaaacactaatgagattgcag
tgccaatgtgaacacaatacctgtggggagagctgcaatgagtgttgccctggttaccat
cagaaaccatggcagtctggaacctttgcttctgacaacacttgtgagaagtgtaactgc
catgacaaagcagaagactgttactatgaccagagtgtagctgatcgcaagctgagtttg
aacatacatggtcagtacaatggtgggggtgtctgtattaattgtaccaacaacactgca
ggcatcaactgtgagacctgtattgatggcttctacagacctcacaaggtctctcctttt
gaccatgatccttgcttgccatgtgactgtaacccagcaggatctataaatgctacttgt
gtgaaggatgataatcacgcgcttatagaacgtggcctgttccctggtcagtgccattgc
caagacggttacacagggaagacatgcagccattgtgctccgggcttcaaaggctttccc
agttgtgcacgctgtaactgtagtgtagctggtagcatcaatgatgacccttgcgctgag
ccgtgccaatgcaagagaaacgtggagggggagaactgtaaccagtgcaagccagggttc
tacaacttgcaggagaggaatcccgaaggatgcacagagtgcttctgctttgggctctct
ggtgtttgcgaaagcatttcctggtccattacacaggtcacagatgttaatggatggcaa
gtgactgaccgtcaaggtattaaaaggatccagtcttatcaggatctgtatggaggccct
atccgaatgaacgttaacagcactgaggccacaaagtctctgcctgctttgtattattgg
acagcgccagaattgtatttgggtaataagttgactgcgtatggaggctacctgaagttc
actgtgttgtatgattttccagtggaaagcagtgttaatgaggcgatctccaatattgat
gtcatcattgagggcaatggtcgaacgctgagtacagggtctgagggcctcctgctccaa
ccatatgatgaaaagctggtttcagttcgactcttacccgagaactttgtggaccttaat
acaaataatgcaattgaccgagatcgcctcatgactgttctagtgaatgtaacacggctg
cagatcagggtcatgtacaacgtcgccaaacaggctgtgtacaggctgagttcggtcacg
ctggatgttgcgaaccccaatgccatcgatattcttcctgctgtggatgttgaacactgt
gaatgcccaccagactactctggcatttcctgtgagtcttgttccccaggtttttatcgt
gtcgatggaatcttgtttggaggaatctgccagcagtgtgaatgtaatggccacgccata
gaatgtgacactaacggcacttgcttgggctgtcagcacaatacgaccggccgcaattgt
gaccagtgctcccttggattgtacggtgatgccagcagagggacgagtgaagattgtcag
ccgtgtgcttgcccactgaacatttcctccaacaacttcagcccaacctgctacttaaac
aaaacaggaagcatcatatgtgaccagtgccagccaggctacacagggaccagatgcaac
aggtgtgctgatggttactatggaaacccaacaacacccggagagtcctgtgtgccgtgt
gactgtaatggcaacgttgaggtgtcagtgccaggaaactgtgacacggtgacaggagag
tgtctgaaatgtattgggaacacggcaggaatacggtgcgagcagtgtgcggagggattt
ttcggtgatgcagttgtcgccaagaactgccgcacttgtgactgcaatgtgaatggttcc
tacggtgaggcatgtgaccccaagaccggccattgccagtgcaaatccaatgttctgggg
cagaagtgtgaccactgtttgcatgggtattttggcttgagcactggactgggctgtgtt
ccctgcaactgcagccaatttggctcactctctgaggactgtagcgatgatgggctctgt
cgctgtgtgccaggggtgagtggagagaagtgtgaccgctgcgcacatggcttttatgga
ttccaggatggtggctgcacaccttgtgactgtgcccacactcggaataactgtgcagag
gattcaggccagtgcatctgcccagcacacacttatggagacaaatgtgaacactgtgaa
accaactactggggtcatgaccctgaaagtgggtgcaagttttgtaactgcagtgtagtc
ggttctgttggtcttcagtgtgacagagtgagcggtcagtgctcttgcaaagaagagttc
ggtggagaaaaatgcagcaagtgcaccgttggccatcgaggctacccacaatgcactgct
tgcaagtgcaatctcagtggtaccagacctgaaaaatgtgacctgaccaaaggagtgtgc
agctgtgaggaacacactgggctttgtccctgtaaggacagtgtttctggtgttcattgc
gatgaatgcagacctggatcgtttgctctcagtctccagcacccgggggggtgcagccgt
tgttactgttctggagtgtcaaattcctgctccgagctccaaggactggtcaggattcca
ctgaccctgacacctgaccagctgagaatgcgtgttgtcacccaaggcaacctgactggt
accagagagggggtcttcgctcagcccccagagacgttgctggatgctgcactagtacag
aggcatctgcaaacagagccgtactattggtcactacctgcccagttcacaggcactaag
ctgttggcctatggagggaaactgagatatgtggttgcattttatgccttggaagactct
ggaagcttaaacctggagccccagatcctactgaaaggataccacaacagcaaaatggta
atttacaggaacatgccaactcctgcaaatggagaacaaatcaggcacatgatagacctg
actgagcatgaatggaagtatttcaattcagtatctgaccaacccgtcacccgccctgac
ttcatgtcagtcctcagcaacgttgaatatttcctgattaaagcttcctatggcactgga
ctccagcaaagcaggatttctaatatctccatggagattgcgatagaggatgatggaact
catgcattgagagatcgtgcacgtcagattgagatctgtgactgcccccctggaaacgca
ggcctctcctgccaggaatgtgctcctgggttctacagacaaaagatgactgatggccta
cagtcactcaataccgtgtgtgtctcatgcaagtgcaacaaccacagtaacatctgtgac
cttgatacaggcaaatgtcaagcttgtcgtgacaacacaacgggtgatcactgtgagctg
tgtgcttcgggatactatggcagagtcggtggatctatcacggactgctccctttgtgcc
tgtcccagatcccattctggcagctttagccccacatgtgtattggagggcgtgagtgat
ttccgttgtaattcctgtctgattggctatgaaggacagtactgtgagagatgtgctcct
ggttactatggtagcccacgtgtaccaggcggtagatgtcaaaggtgtgaatgtaacccg
aatggttctgtgcacatcaactgtcatcctttaatgggccattgtgtttgcaaaccaggt
gtaacgggtcgactctgtaatcaatgtgaagctaagcatgtgctggtggaaagtgaatgc
atatcttgtgatgatgattgcacaggactcctgctatctgatcttagcaacttggaaacc
attttgatgacattaaacgtgacaggctttgatccagctccctataatctctttactgac
atagaaaacaggacagaacaatacaaggtcgctctggaattggctgatggacacaatctg
gatgaagctgttgggagaacactaaccaggggtttggaacttgcagtttttgtaaataaa
acaaccaagacaataaatgctctcgttgacatggcaaatcacctaaatgaaacactgggc
actgacctgaatctttcagacaccaaattgcagcaactccagcacgagatcctgaatatg
ctggaatccatgcggaatagagtgtttaatcattcaaaagaaatttccgaaatggaacta
aaagcggcacaagatctgttggccagcgtgcagaaggagtttcagaaaccccataaggaa
ctgaaggacttgaaaattagggtcaaggatatgttagtccaacgtgcgaatgggttgcag
gaagctcaaaagctagtgaatgaagcacgttcaaacaccgatgaaagcagcaggatgctc
ctcagcatcaccagcggcctgcgagagctccaggaaaaacagcagactgtgaggagtatc
aagacactgacaacaagcctgatccaagatgggcgagagatgctggacactgcagcaaat
atgacacaagacattgtgaacaacacagcttttctggagcaatacagtgaccagctggat
ttgtggaatactaagatgaggatgcaccttgacaagttggtaatggagatgactcaaaag
agtgtgctcagcctcgtctataaggcagaagaccatgctgaagaactcagtgagattgcg
aatctgctgaacagttcccttgcagctgtaagaaacatgtctctgaatgccacagtggcc
atcaacacacactccaatatcaaagcactcattgatgaagctgcaagcattgcattggaa
gctaggaacaaagctgatgctgcattgaagttggccattagtccacaaaaaccactggag
gagtttggcaggaagtcagcccagcgcagttcagagatcctaagcgatgcaaatgatttg
aaaaacagaactgctgggcttgtgaatcagctgaatggattgaaggggaaggtggaccag
attcagaagggcgtgggtaatgtgagcaggcacctcaacaagccctggcgcattctggca
cagttgccaaatgggacagatgctcgattccaagaggcgaaggatcgtgcagtctcggca
aacctgacagcagctgcaactcttgctgaaattcagcagttcagtcagcagctgctgagc
acatctggctccgtggcgagagtcaataaaaccgtcagagaaacaaatgacctcatcagt
gattcagcgaagactgcggcggccgctggtaaaaaggtgcaggaggtcgaagttcaagcc
aactacctgctggagaagctgaagccgctgaaagttctggaggagaacctgaacagaaac
ttatcagagataaaggaattgatcagtcaggcgcggaagcaagctgcttcgattaaagtg
gcagtatcagccaaccatgattgtgtccgtgcctaccaaccagcagtgacaagcagcaac
tacaacactctgacactgaatgtgaaaacctccgaatcagaaaacttgctgttctacctc
ggcagcagcaccagtactgaattcctggctgtggagatgagacatggcagggttgtcttc
ctatgggatgtgggctctggcacaacgagactggaataccccgatcttcaaattaacaac
aacaagtggtacaggattcacgctgccaggtttggccgtatgggtaccttatctgttcaa
gaagttggtgcgtccagtttagacaagccagtggtaaagacagcctcatctcctggaacc
tccactgtattggatgtggacaataccacactcgtgtttgttgggggtctctcgaaacaa
atgaagaaagtagcggctgtgaggattacccacttcaaaggttgcttgggtgaagccttc
ctggatgggaaatccatcggcttgtggaacttccgaggaagagaagggagttgtagtggc
tgctttgcgaggtcacagaacgaagacattgctttccactttgatggtagtggctattca
gctgtcgagaaagtgttacgttccacaacaacccagctggtgatgcagttcagcacattc
tcaccaaatggcttgctcctctacctcgcttcaaatggcaccagagatttcttagcagta
gagctggcagacgggaaagtgcgagtgacctttgacctagggtctggagttctaaccctt
atgtcagagaaaagatacaacaatggaacatggtttaaaattgcatttcagcgcaaccgg
aagctaggtattttggctgtcatggacccatttaattcaacggatcgagaaaccaagcaa
ggagaatcaccaggaactgcttcagatctcaatcgtgggaacaaagatccaatctatgtc
ggaggattgccgcgctccagaagctacaggaaagaagttctcagcaaatcgtttgtgggt
tgcttgaagaaattggagatttaccgttcaactttcgacctgctgaggaattccttgggt
gtgaggaaaggttgtttgcttgagcctatccgtagtgtgacagtttggaatgatggctac
attcagttacagccacaagtccttccagtggaagccaggttaatgacaacctttagtacg
cagaatgacactgggatcattttagccgggtttggcaaatcaacgaggaaccgcaatcgt
cggcagacaaagatggcgttctttgctgtgatgatgattgatggccgtgtggaagctcat
gtcaacaccggtgatggagtccataccaggagagtcattgccaagtctccttcaggaacc
ttcagtgacgggcaggaacattcgatcatactgtcgagaagtaagaggattatgacgttg
cagattgatgaaggaaaccgccttgaaatgagactcggggcctcagcggataccagtcca
ttgaatataaccagattctatgttggcggggttccaactggagagggcgctattgtcctt
aagatcacaagctccttcacaggctgcattaagaacctggtcctgaatacagagttgttg
gacttcagcggcgttttgaggtaccagaatatcgacctggacagctgcctgctttcagcc
cctgagccggacaagagagacttggagctggtgcttcagccgactgcaaaacccatccaa
ccgcccgtgagaaacaccagccccacccactcgccatatagctcctcctccaacaagaaa
acttgtacagtggacaaattgccaggctacgttgccaatgctcatcagtttggactctcc
aaaggcagtcacatgattctgtcccttgatgaaaccacagttaagaggaaatttgtcatt
cagctgaatattagaacttatgcctccaatggcctaatatattatatggcccatcaaaac
cagattgactacgccacccttcaactatggaaggggcagttacatttcctgtttaacctc
gggaaaggcacagcaacgtccatcatgcccactcctattaatgatggcaaatggcataca
gtgaaaacagaatatgtaaagcgaagaggtctgattaccgtcgatgggaaggaatccaat
ccggctttgggagatggtaattcactggatgttgaaggaaggctgtatcttggaggtttg
cctttagattacactgccaggaaaataggaaatgcgacgcacagtatccctgcttgtatt
ggcaatgtggcattgaataacaagcccctggacctggagaggccagtttccatccttact
gtgagcaggtgttacttggctgtccaggagggcactttcttcgatggcactggatttgct
gcgctggtgaaagaaggttacaaagtgaggtcagatgtaattgttacatttgagttccgc
agtacgacccgaaacgcggtactgcttggcatcagcagtgctaaggtggatgcaattgga
ctggagattgtaaatggcaaggttctgttccatgtaaataatggagctggaagaattaca
gccagatatgaacccaaggattcaaaccagctgtgcaatgggaagtggcataaacttcga
gccaataagagcaagcatcgtattacactgactgtggatggagttactgtgcaagctgac
aatcctcatattcagtcaacttcagcagacactaatgatccaatttatgtaggaggctat
cctgctaatgtgaaacaaaattgcctgacccttcaagagccattccagggctgcataagg
aacctcaagctgacaaaaaaccaacagatccaggcctttgatttcagcaaagcctttgac
ctccgaggcgtctttcctcattcttgccccggcatcgaacagtag
DBGET
integrated database retrieval system
