KEGG   Chiloscyllium plagiosum (whitespotted bambooshark): 122548797
Entry
122548797         CDS       T08871                                 
Symbol
ubap2a
Name
(RefSeq) ubiquitin-associated protein 2a isoform X1
  KO
K26545  ubiquitin-associated protein 2
Organism
cpla  Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:cpla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cpla04121]
    122548797 (ubap2a)
   03400 DNA repair and recombination proteins [BR:cpla03400]
    122548797 (ubap2a)
Ubiquitin system [BR:cpla04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    122548797 (ubap2a)
DNA repair and recombination proteins [BR:cpla03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     122548797 (ubap2a)
SSDB
Motif
Pfam: UBAP2-Lig UBA_4 GIP1_N UBA_RAD5A UBA_8 DUF1510 HTH_WhiA CUE
Other DBs
NCBI-GeneID: 122548797
NCBI-ProteinID: XP_043543510
LinkDB
Position
1:59893567..60019333
AA seq 1152 aa
MSKVNRFCQYGGCSSKDIILLLLILNHGIGEGNKVIITNAFSETGMFSADISEKERLTVR
RLVTSRVQDGGGDLRQSRGPRGFVSTLTVGNDRSRGTRDKIQTQTCAQIQKPVQATAEQI
RLAQMIYDKNDADFEEKVKQLMEVTGKNPDESIVALHDCNGDVNKAINVLLEGNSDTTSW
ETVGKKKSLGTGKDGLLENKENREKRGDKAIRGRAASSRRGRGSQGRDYRVEENGVDVSP
GDKYAERGRRGRGRGFRGRNRGRGAGRFSAQGMGTFNPIDYADSATNNGFGTTSEIWEAS
RNNGTGAWQNSMEDWVTEDWNEDQLTETKVFTASTLARMENQVTPGLSTDLATLLQKPST
DTVTETNSCEAPQQANLTQSLVFTNSQHDDPISSVEGNSNAVNSYTQNLSPGFGELAATK
IPNSSASQLLEQLNSSSLGEISAQARKTSNNTSWEDQSTSQSTVLSQFDFKTQPEPSPVL
SQMTQRQQQTSEPVLNTYSSQIKLRELTPVDSTAVKIIQLLPISTDNQITNVQHIQQKQL
KTQKRKVPTSSKIPASAVEMPGSINVSELNVQFGALEFGSEPSLSEFGTGSKETINQAQN
HLFSNSVSDSMSQFLSISSAVQESTDPSSISSCSSTIAQVTSVTSTVDQSSVHGIPYQNS
LGAAQKEASSQIGLGTHQALEATICPNVKSAESPSLSSVNSLSTGVSTASLLPTVSQHSA
SLSSLNQTNELPSSSISQLSTSLPSHQSSSLTPASSLTTSSPNAHANIDSSLQTSETFST
ALTFTTATTSAVSASSNLNTTNSLGLSAASVSMPTATTRAVPSVSSGKAPPNLPPGVPPI
LHNQYIVGPGGLLPAYPIYGYDDLQVLQSRLPLDYYGMAFPAPAAALAGRDGSLASNPYS
GDLAKFGRGDSASPAPATTLSQPQQNQAHHTTQQAFLNPALPPGYSYTGLPYYAGMPGVP
STFQYGPAMFLPPAAAKHGVNMNTASAFQQAGGYGQHGYGTGYEDLNQGGGAGDYSKGAY
SGSTQAQTKSAAAGPGKGISVNSSNIVPDMTGSVYKTQSFDKQGFHAGTPPPFNLPSALG
ATGTLNPGAAAGYAPPFLHIVSAHQQPHSQMLHHHLQQDNQSGSGQRNQQNSIPQKSQVN
KPNYGNSPYWGN
NT seq 3459 nt   +upstreamnt  +downstreamnt
atgagtaaggtcaataggttttgtcagtatggtggatgcagcagcaaggatatcatcctg
ttgctgctgatacttaaccatggcattggcgagggcaacaaggtcattataaccaacgcg
ttcagtgaaacgggcatgttcagtgcagatatttctgaaaaggagcgattgacggtgcga
cgactcgtgacgtcacgtgttcaagatggcggcggggatttgaggcagtcacgtgggccg
cgcggctttgtgagcacattgacagtgggcaatgaccgatctcgtggcactcgggacaag
atacagactcagacatgcgcacagatacagaaaccagtacaggctacagcagaacaaatt
cgacttgcccaaatgatctatgataagaatgatgcagactttgaagagaaagtgaagcaa
ttaatggaagtcactggaaagaacccagatgaaagcatagttgcacttcatgactgcaat
ggtgatgtaaacaaagcaatcaacgtactgctggaaggaaattcagatacgacttcatgg
gagactgtaggcaaaaagaagagtcttggaactggaaaagatggccttctagaaaataaa
gaaaaccgagagaagcgtggagataaagcaattcggggtcgtgcagcctcttctagacga
gggagaggaagtcaaggcagggattacagagttgaggaaaatggagtggatgttagtcca
ggtgataaatatgcagagcgaggcaggcgtggccgtggcagaggatttcgtggacgtaac
agaggtaggggagcaggaagattttcagcacaaggtatgggaacctttaaccccatagac
tatgcagattctgcaacaaataatggttttggaacaacatctgaaatttgggaggcaagt
cgaaataatggaacaggtgcttggcagaattccatggaggactgggttactgaagactgg
aatgaagatcagctgaccgaaacaaaggtctttacagcttccactcttgcaagaatggag
aaccaagtcactccagggttgagcactgatctagcaacattgcttcaaaaaccctcaact
gatactgtaacagaaaccaactcgtgtgaagcaccccaacaggcaaacctcactcagtca
ctggtgttcactaattcccaacatgatgatccaatttcatcggtggaaggcaactccaat
gctgtgaattcctacactcagaacctgtctcctgggtttggggaacttgcagctacaaaa
atccccaattcttcagcgtcgcaattacttgagcagttgaattcatctagtttgggagag
atttctgcacaggccaggaaaacaagtaacaacacttcttgggaagaccaatcaacttca
cagtcaacagtcctgagccagtttgacttcaagacccagcctgagccttcacctgttttg
agccagatgactcaacggcagcagcagacctctgaaccagtattaaatacctattcctct
cagatcaagttaagagaattgactcctgttgatagcactgctgttaaaattatacaactg
ctacctatctccacagacaatcaaataaccaatgttcaacatatacagcaaaaacaactt
aaaacacagaagaggaaggtaccaacatcttctaaaattcctgcatctgctgttgaaatg
ccaggatcaattaatgtctctgaattgaatgttcagtttggagccttagagtttggatca
gagccatctctgtctgaatttggaacaggaagcaaggaaaccatcaaccaggcacaaaac
cacttgttctcaaattctgtaagtgattcgatgtcacagtttttgtcgatatcgagtgca
gttcaagaatcaacagatccatcttccatcagctcttgcagctcaacaattgctcaggtt
acttcagtgacttcaacagttgatcagagttcagtgcatggaataccttaccagaactcc
cttggtgcagctcaaaaggaagcttcctcacagattggtcttggaacacatcaggcactc
gaagccacaatttgtcccaatgtgaaatccgctgaatctccatctttgtcaagtgtgaat
tcactatctactggagtgtccactgcttctcttctgcctacagtatcgcaacattctgct
agcttgtccagtttgaaccagaccaacgaattgcccagcagctccatttcacaacttagc
acttccttgccaagccaccaaagcagcagccttactcctgcctcttcactaactacaagc
tcacccaatgcacatgcaaatattgacagcagcttacagacttctgaaactttctccact
gctttgacatttaccacagccaccacctcagcagtcagtgcctccagcaacctaaacact
acaaacagccttggactgagtgcggcaagtgtatccatgccaactgctactacacgagca
gttccctctgtttcttcagggaaggctccaccaaatcttcctccaggtgtgcctcctatt
ttacacaatcagtacattgttggaccagggggactactgcctgcatatccaatttatggg
tatgatgaccttcaggtacttcaatccagactacctctggattactatggaatggcattt
cctgcaccagctgcagcacttgctggcagagatggaagtcttgcaagcaacccttattca
ggcgatctagcaaagtttggcaggggtgactctgcttcacctgcaccagcaaccactctt
tcccaacctcagcaaaatcaggctcatcacaccactcagcaagccttcttaaacccagct
ttgccaccaggatacagttacacaggattgccgtattatgctggtatgcctggtgttcca
agcacattccagtatgggcctgccatgtttttacctccagcagctgcaaagcatggagtg
aatatgaataccgcttcagcttttcaacaggcaggtggctatggacagcatggatacggg
actggttatgaggatttaaaccaagggggtggagctggagattacagcaaaggtgcctat
agtgggtctactcaagcacaaaccaaatcagctgcagctggaccagggaaaggtatttca
gtgaactcttctaacattgttcctgatatgactggctcagtatacaagactcagtctttt
gacaaacagggatttcatgctggtacgccacctccgttcaatctgccatcagcacttgga
gcaacaggaaccttaaaccctggtgcagctgcagggtatgctccaccgtttttgcacatt
gtgtcagctcaccagcagcctcactctcaaatgctacatcatcacctgcaacaggataat
cagagtggatctggacaacgcaatcaacagaacagcataccacagaagtctcaggttaac
aaacccaactatggcaactccccgtactggggtaactaa

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