Chiloscyllium plagiosum (whitespotted bambooshark): 122548897
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Entry
122548897 CDS
T08871
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04137
Mitophagy - animal
cpla04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122548897
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
122548897
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpla03019
]
122548897
03009 Ribosome biogenesis [BR:
cpla03009
]
122548897
04131 Membrane trafficking [BR:
cpla04131
]
122548897
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cpla04147
]
122548897
Messenger RNA biogenesis [BR:
cpla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
122548897
Ribosome biogenesis [BR:
cpla03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
122548897
Membrane trafficking [BR:
cpla04131
]
SNARE
SNARE associated proteins
Others
122548897
Autophagy
Aggrephagy
Other aggrephagy associated proteins
122548897
Exosome [BR:
cpla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122548897
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
RNA_helicase
NPHP3_N
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
IstB_IS21
ATPase_2
AAA_7
AAA_18
ATPase
DUF815
ABC_tran
AAA_24
TsaE
NB-ARC
ResIII
Viral_helicase1
NACHT
Sigma54_activat
SLFN-g3_helicase
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
122548897
NCBI-ProteinID:
XP_043543774
LinkDB
All DBs
Position
1:complement(60772250..60850775)
Genome browser
AA seq
806 aa
AA seq
DB search
MASGGESKSDDLSTAILKQKHRPNRLIVDEAINEDNSVVSLSQAKMDELQLFRGDTVLLK
GKKRRETVCIVLSDDTCSDEKVRMNRVVRNNLRVRLGDIVSIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDVIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWDDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRV
INQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRGAILKAN
LRKSPIAKEVDLEYLAKTTNGFSGADLTEICQRACKLAIRESIESEIRRERERQGNPSAM
EVEEDDPVPEIRKDHFEEAMRYARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSSSQAG
AGPSQGTGGGSGGNMFSEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgggaggagagtccaaatctgatgacttgtcaactgctattctgaagcagaag
catagacccaatcgactaattgttgatgaagcaattaatgaagataacagtgtggtttca
ctctctcaggcaaagatggatgaactgcagcttttcagaggtgatacagtattgctgaaa
ggaaagaagagacgagaaaccgtttgtattgttctatcagatgatacttgttctgatgag
aaggttcgcatgaacagggttgtgcgcaacaacctgagagtgagattgggtgatattgtg
agcattcaaccatgcccagatgtaaagtatggcaaacggatccatgtactacccattgat
gacacagttgagggcattactggaaatttatttgaagtttacctcaagccatatttcctg
gaggcttatcgaccaatcaggaaaggtgatatcttcctggtccgtggtggaatgcgggct
gtggaattcaaagtggtggaaactgatccaagcccatactgtatagttgctccagacaca
gtcattcactgtgagggtgaacccatcaaacgagaggatgaggaagaatctttaaatgaa
gttggttatgatgatattggtggatgcagaaaacagcttgctcagatcaaagagatggtg
gagctgcctctccgtcatcctgcccttttcaaagcgattggtgtcaagccaccacgtggt
atcctgttgtatggcccccctggtactggcaagactctgatagcacgtgctgttgcaaat
gaaactggcgcgtttttcttccttataaatggacctgagataatgagcaaacttgcagga
gaatctgagagcaatctgagaaaagcatttgaagaggctgagaaaaatgctcctgcaata
atttttattgatgaattggatgccattgctccaaagagagagaagactcatggcgaagtg
gaacgtcgtattgtgtcacagttgctcactttgatggatggtttgaaacaacgggctcat
gtgattgttatggcagctacaaatcgaccaaatagcattgatcctgcccttagacggttt
ggccgatttgacagagaagtggatattggcattcctgatgctacaggtcgactggaaatc
ctacagattcacacaaagaacatgaagttggcagatgatgtagaccttgaacaggttgct
aatgaaactcacgggcatgttggtgctgacctggccgccttatgttctgaagctgctctt
caagctattcggaaaaagatggatgttattgatctggaagatgaaaccattgatgctgaa
gttatgaattcacttgcagttaccatggatgatttcaggtgggcattgagccagagcaat
ccatcagcactacgtgagactgtggttgaggtgcctcaggtaacgtgggatgacattggt
ggactggaggatgtgaaaagggagcttcaagaacttgtacaatatcctgtggaacatcca
gacaaatttctgaaatttggcatgaccccttcgaagggtgtactattctatgggccacct
ggctgtggtaaaactttgctggcaaaagccattgcaaatgaatgccaggctaactttatc
tcaatcaagggaccagagctgcttactatgtggtttggagaatctgaggccaacgtccga
gaaatctttgataaggcccgtcaagctgctccctgtgtgctgttctttgatgaacttgat
tccattgctaaggctcgtggtggcaacattggtgatggtggtggtgctgctgatcgtgtt
ataaatcagatcctgactgaaatggatggcatgtccaccaaaaagaatgtctttatcatt
ggtgcaactaaccgcccagatattattgatcctgcaattttgcgccctggacgccttgac
caactgatttacattccactgcctgatgaaaaatctcgtggtgctattttgaaggctaac
ttgaggaagtctcctattgctaaggaagttgacttggagtatttggctaagaccaccaat
ggattttctggagctgatttgactgaaatctgtcagcgagcctgtaaacttgcaatcaga
gaatcgattgaaagtgaaatcagacgagaacgtgaaagacaaggcaatccttcagctatg
gaggttgaagaagatgatccagttcctgaaatacgaaaggaccattttgaggaagctatg
cgctatgcacgccgatctgtcagtgataatgatattcgaaaatatgaaatgtttgcacaa
acactgcagcagagtcgtggatttggcagtttcagattcccatctagtagtcaagctggt
gcaggaccaagccaaggaactggaggaggaagtggaggaaacatgttcagtgaagacaat
gatgatgatctgtatggttaa
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