Chiloscyllium plagiosum (whitespotted bambooshark): 122549007
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Entry
122549007 CDS
T08871
Symbol
nbn
Name
(RefSeq) nibrin isoform X1
KO
K10867
nibrin
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03440
Homologous recombination
cpla04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
122549007 (nbn)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
122549007 (nbn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpla03032
]
122549007 (nbn)
03400 DNA repair and recombination proteins [BR:
cpla03400
]
122549007 (nbn)
DNA replication proteins [BR:
cpla03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
122549007 (nbn)
DNA repair and recombination proteins [BR:
cpla03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
122549007 (nbn)
BRCA1-C complex
122549007 (nbn)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Nbs1_C
NIBRIN_BRCT_II
FHA
BRCT
PTCB-BRCT
RTT107_BRCT_5
Yop-YscD_cpl
MU2_FHA
Motif
Other DBs
NCBI-GeneID:
122549007
NCBI-ProteinID:
XP_043544049
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Position
4:44942859..44996582
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AA seq
762 aa
AA seq
DB search
MWSLVPIASAGDEPYHLMVGVDYIVGRKNCAILLRDDQSISRSHAVLSVSHPAAHLTQVT
KNSVLTLKDTSKYGTFVNEERLQLDSPRILKSRELVTFGLFQSKFRVEYEPLIVCSSCLD
GLEKIELNKSIQELGGHLSNNWTEANTHLVMSSVKVTVKTICAMICCRPIVKPEFFVSLI
RAIRNRQCLPSPESFSPPIDEPSIKPGELDITTKPERKSIFRDKTFIFLNEKQHKRLNSA
VILGGGDVKLVGNNTSDISFLEVPGGCVIDVGMSDSQTSGEKLIEPVRRALQRKGLRVIS
EAEIGFAVIHNSTDIYCNPNRQLDQGMFSSSRTTIPGPTLSENLKIDDMTAPDTSQVTAY
VPDTQSTQEHSTSLLQWGKQFGSLNSAETLSGMNIDYTQVIKETPENESKMESQDISVAR
ETSSVRPLLPADEKPKNELRQTFVTVDKKPFIPTTLKNVKKKSSLSSQKQSLLPHDFFQP
VGRKREREETGSSQAKFARTEEPTIPTDHHLNITDSSLEKSDSKFAGQRTQCEYLSANHK
TGVSDQSLKEIPREVGEEETAKAIRKRKDPENKNLKSDLKLPTDDQLEVTKRRKLEPEVL
PFNRNDESVTEDVNKACHAKTSQVKQESELEHELPAPLDKELNNNLNLLHESGNNEALPN
RLLVTVFKSLVVSQPGRGRILASNEENSQLKNFKKFKKVLFPGAEKLPKIIGGTDLKAYQ
TKKNSEIEEWLRQEAEEQSHQLKEENLADDLFRYDPKSVRRR
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgtggtcgttagtgccgatcgcctcagccggagacgagccctaccatttgatggttggt
gtggattatatcgttggtcgaaagaactgtgcaatccttttacgtgatgatcagtccatt
agtcgttcccatgctgtactttcagttagtcaccctgctgcacatctgacccaagttacc
aaaaactctgtactgacattaaaagatacttcaaaatatggaacctttgtaaatgaagag
cgcttacagcttgatagcccacggattttgaagtcaagagaattggttacatttggcctt
ttccaaagcaagttcagagtagaatatgaacctttgattgtatgctcttcctgtttggat
ggactagaaaaaattgaactaaacaagtcaattcaagagcttggaggtcatcttagcaac
aattggacagaagctaacactcaccttgtcatgtcatcagtcaaggtcactgtgaagacc
atatgcgcaatgatttgctgtcgacccatagtgaagccagaattctttgtcagtcttatc
agggcaattcggaatagacaatgtcttcccagtccagaaagtttctctccaccaattgat
gaacctagtatcaagcctggagagctggacattacaacaaagcctgaaagaaaatcgatc
tttagagacaaaactttcatctttttaaatgaaaagcagcacaagaggctgaattctgct
gtaattcttggaggaggagatgttaaacttgtagggaataatacctcagatatatcattc
cttgaagtaccaggaggctgtgtcattgatgttggaatgtcagattctcaaacttcagga
gaaaaattgattgagccagtgaggagagctttgcaacgaaaagggctgcgtgttatatct
gaggcagagattggttttgcagttattcacaattcaacagatatttattgtaaccccaac
cggcagcttgatcagggaatgttctcctcttcaagaacaacaattccaggtcctacactt
tctgaaaatttgaaaatagatgacatgactgctccagatacctcacaagttactgcatat
gtaccagatacacaatcaacacaagaacacagtacaagcctgcttcagtggggaaaacaa
tttggtagtctcaattctgcagagacactgtcaggaatgaacatagattacacacaagtg
ataaaagagacacctgaaaacgaaagcaaaatggaatcacaggatatttcagtggccaga
gaaacatccagcgtgagaccactgcttccagcagatgaaaaaccgaagaatgaactgaga
caaacatttgtcactgttgacaaaaagccattcataccaacaacactgaaaaatgtcaaa
aagaaaagtagcctctcttcacaaaagcaatctctcttaccgcatgatttctttcagcca
gtggggagaaaaagggaaagagaggagactggatcatctcaagctaaatttgcaagaaca
gaggagccaactatacccactgatcatcacctaaatatcacagattcttcattggaaaag
agtgactccaagtttgcaggacaaaggactcagtgtgaatatctttctgcaaatcataaa
actggagtctctgatcagagtttaaaagaaatccctagagaagttggtgaagaagaaact
gcaaaggcaataagaaaaagaaaagacccagaaaacaaaaatctgaaaagtgatctgaag
cttcctacagatgaccagctggaagtgactaaaaggagaaaactagaacctgaggtttta
cctttcaacagaaatgatgagtctgtaacagaagatgtaaacaaagcatgtcatgcaaag
acatcacaagtaaaacaggagtctgaacttgaacatgaattgcctgcaccacttgataag
gagttaaataataatttgaatttacttcatgaatctggaaataatgaggctcttccaaac
agacttcttgtaactgtgttcaagtcacttgttgttagccaacctggaagagggagaata
cttgcctcaaatgaagagaatagccagttgaagaactttaaaaaatttaaaaaggtttta
tttcctggagcagaaaagcttcctaaaattattgggggcacggatctgaaggcttaccaa
accaaaaagaactctgaaatcgaagaatggttaagacaagaagcggaggagcaaagccat
caacttaaagaagagaatcttgctgatgacttattcagatatgacccaaagtctgtcaga
agaagatga
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