Chiloscyllium plagiosum (whitespotted bambooshark): 122549020
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Entry
122549020 CDS
T08871
Symbol
cdh17
Name
(RefSeq) cadherin-17
KO
K06811
cadherin 17, LI cadherin
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cpla04515
]
122549020 (cdh17)
Cell adhesion molecules [BR:
cpla04515
]
Cadherins
Major cadherins
122549020 (cdh17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
PCDH15_12th
Cadherin_4
Podoplanin
Motif
Other DBs
NCBI-GeneID:
122549020
NCBI-ProteinID:
XP_043544082
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Position
4:41347173..41443441
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AA seq
839 aa
AA seq
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MKASKYQNNDKLLLLILAVILTTGINANLPKGPLTTMELSITEEFTAPFMIYQFTSENVD
VTTFAIIGETKGVFNILDNWLVANVTLDREEKASYELKIVGQNDAHETVEGPEVVTVLLR
DINDNQPIFTEQQFDGVVRQNSRPGKPFMSVTATDLDDPETPNAKIYYSILQQIPNSNDI
MFFQIDNQTGKISTTEEGYQSLDPKVQDNYQLIVSANDAAVLSLSTNAAVKITVKENLWK
APGKISITENSTDPHPKTFIRVQWNEPGAIYEVKPKVELAYPKFPFAVDANGNISVTEPL
DREQISEYILLVYALDENRQPLEEPLEITIIVEDINDNYPICNPEVKFLEVQENEPIGSY
IGTVLANDMDEDGSVNTLLSFKIIDQEPKIPEDEMFSIDDFKGEIKRFQGHLLKRIAPDY
ILTVLVSDQPGLSTECIVNISVIDINDKIPIFQKSEYGPITLREDISLDTVLIEIQATDD
DEPFTGSSEIEYHVVEGDTNGTFKIITDPKTNKGRVQLVKPLDFEEYSSYMLTISATNPE
PLVEGVEYNSSSFAFLFINVTDTDEPPQFLKSLYRKWIFENASLGDFLLKVEAKDPEGAE
VSYSIQDPLQLFRIDSKTGEIFVKNELDAEKQNHLKIKAFAMEKDRPKKRSSVEVSVYFN
DVNDNAPKLAKDSSQFSICLPAVEEKKIIIHAVDDDKENGPPFMFSIPADPGKELKVETI
NDTHAYVTMKFGRHSEETKYNLRVLITDSGSPPLQGIDNITVAVCKCTDKNVCFIPVEGL
SGSSKVALAVGILLGTFAFIGLILAVVLLKMKSKKGGKGDKIDPKAARTENETIPLANA
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcatccaaataccaaaacaatgataaactgttgttgcttattctcgcagtgatt
ttaaccactggaattaatgcaaacttgcccaaaggcccattgacgacaatggaactttct
attactgaggaattcaccgctccttttatgatatatcagtttacatcagagaatgttgat
gtgacgacttttgcaataattggtgaaacaaaaggcgtgttcaacattttagacaactgg
ttggttgccaatgtgaccctggaccgtgaagaaaaagcatcgtatgaattaaagatagta
ggtcaaaatgatgctcacgaaacagttgaaggacctgaagttgtcactgttttacttcgt
gatataaatgacaatcaaccaatattcacagaacaacagtttgatggagttgtccgccag
aattccaggcctgggaagcctttcatgtctgtaactgcaactgatttggatgatcctgaa
actcctaatgctaaaatctactacagcattttacaacaaatcccaaacagtaatgacatc
atgtttttccagattgataaccaaacaggaaaaatctccacaacagaagaaggataccag
tcacttgatccaaaggtacaagacaactaccagctgatagtgagtgcaaacgatgcagct
gtcttgtcgctgagcacaaatgctgcagtaaagattactgtaaaagaaaatttgtggaag
gcacctggtaaaataagcattaccgagaattctacagaccctcatccaaagacattcata
cgggtgcaatggaatgaacctggtgcaatatatgaagtcaagccaaaggtcgagcttgct
tatcccaagtttccatttgcagtcgatgcgaatggcaacattagtgtgacagaaccatta
gacagagaacagattagtgagtatatacttttagtttacgcactggacgaaaacagacag
ccactggaagagccattggaaattacgatcatcgtggaagatatcaatgataattacccc
atttgtaacccagaagtaaagtttcttgaagtccaagaaaatgaacctataggaagctac
atcggaactgtgcttgcaaatgacatggatgaagatggatcagttaatactcttttgagc
tttaaaatcattgatcaagaaccaaaaattccagaggatgaaatgttcagtattgatgat
ttcaaaggagagatcaagcgtttccaaggacatctactgaaacgcattgcaccagattat
attttaacagtcctagtcagcgaccaaccaggactgtccactgaatgcattgtcaatatc
tctgttattgatatcaatgacaagattcctatctttcagaaatcagagtacggtcccatc
actttacgagaagatatttcattggacacggtactgatagagattcaggcaacagatgat
gatgagccattcacaggcagctctgagattgagtatcatgttgtagagggtgataccaat
gggactttcaaaataataaccgatccaaaaacaaataaaggaagagtgcagctggtgaag
ccactagactttgaagagtattcatcttacatgttaacgatcagtgccacaaatccagaa
ccgcttgtggaaggagtggagtacaactcaagctcttttgccttcctgttcattaatgtg
accgatactgatgaaccaccacagttcttaaaatctttgtatcgaaaatggatattcgag
aatgcctccttaggtgatttcttgcttaaagtggaagccaaagatcctgaaggtgctgaa
gtgagctatagcatacaagatccacttcaattgttcaggattgactcaaaaactggagaa
atcttcgttaagaatgaattggatgcagaaaagcaaaatcatcttaagattaaggctttt
gcaatggagaaagacagacctaaaaagagatcttcggtggaagtctccgtttactttaac
gatgttaatgacaatgctcccaaattagcaaaagattcctctcagttttccatttgctta
ccagctgtagaagagaagaaaataataattcatgctgtagatgatgataaagaaaatggt
ccaccgttcatgttttctattcctgcagacccaggcaaagaattgaaagttgaaaccata
aatgatactcatgcctatgtcaccatgaaatttggccgacacagtgaagaaacaaaatat
aatcttcgtgtactaatcactgatagtggctctccacctctacaaggaattgataacata
acagttgctgtctgtaaatgcacagataaaaatgtatgcttcattccagtagaaggttta
tctggatcatcaaaagtcgctcttgcagttggaatattgctaggaacctttgcttttata
ggtttgatccttgcagtggtacttttaaaaatgaaaagcaagaaaggcggaaagggtgat
aaaatagatccaaaagcagcacggactgagaatgaaacaatacccctggctaatgcataa
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