Chiloscyllium plagiosum (whitespotted bambooshark): 122549040
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Entry
122549040 CDS
T08871
Symbol
myom1b
Name
(RefSeq) M-protein, striated muscle isoform X1
KO
K24495
myomesin
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
122549040 (myom1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cpla04990
]
122549040 (myom1b)
Domain-containing proteins not elsewhere classified [BR:
cpla04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
122549040 (myom1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
fn3
Ig_3
ig
Ig_DSCAM-DSCAML_C
Ig_2
V-set
Pur_ac_phosph_N
C2-set_2
Ig_J_second
Tissue_fac
Receptor_2B4
C2-set_3
Ig_VEGFR-1-like_5th
Lep_receptor_Ig
Motif
Other DBs
NCBI-GeneID:
122549040
NCBI-ProteinID:
XP_043544140
LinkDB
All DBs
Position
4:51102255..51262304
Genome browser
AA seq
1605 aa
AA seq
DB search
MSSLSLPFYQKHHRHYDRDYRNTQLSSTMQEYRQEEKRSTATHSHRVRSKFSDEMLETSS
GSPQMKRAKQDYYSKGKENEAVDYIVPVFRGCHEHFSGITSSKDERTKQSKSSHFAGESH
SALSNTIEEHHIEKSAMHKSRKVAIRESAERISLNKEIYDTQDFHKRLREDSLLRLPEFI
IKPRSHTVWEKQNVKLHCTVSGWPVPRVTWYKNNVSINVHTDPGKYIIDSKYGVHSLEIN
NCDFDDTAQYRASAMNAKGELSTFASVVVKRFKAEHGDLSFHPGRIAPPSYDYFPGDPHM
KFEVHFVDKFNVSFGKEGDTLSLGCTVIVHPNLKRFQPEIQWWRNGIQLQPSKWVEMHWS
GETATLTFTHLNKEDEGLYTIRVLTKSGYEVHSAYVFVRDADAEVAGAPGAPLDVYCLDA
NKDYVIVTWKQPAVDGGSSILGYFVDRCEVGTNHWVQCNDTPVKFARFPVTGLIEGRSYI
FRVRAVNNVGISRPSRVSEPVAALDPADKARLKGIPLAPWTGQIIVTEEEPAVKCCCPTY
MPTEGVVPGQPTELAVTEATRNYVVLSWKPPGQRGHEGIMYYVEKCVAGTEDWQRVNPEI
PVKSPRFALFDLAEGKSYRFRVRSANSAGISEPSEPTEFTEVTDKLDVPKAPSHVVPSRN
TDTSMVVTWEESKDAKELVGYYIEASISGSGKWEPCNNKPVKGKRFICHGLQTGQLYKFR
VRAVNAAGLSQFSHESEALEVKAALGGGVPHGVFPEQNAAPPPPYGITVLESVRDSMVLG
WKQPKFQGGADITGYFVDYREIIDGIPGKWKEANIKAITERAYRIHDLKENMVYQFQVRA
INMAGVGLPSLPSEKFTCEEWTIAVPGPPHDVVYTEVRKNSLVLLWKAPIYSGRSEVTGY
YADIREADADDEKWRSVNEKEISKRYIKVQGLKEGVKYVFRVRAVNRAGVGKPSDLTEPV
TAETPPGTKEIAVNVDDDGVISLTFECADMAEGSKFIWSKNYEDLIDSSRVTMETKGGKT
KIIFNDPGKDDLGIYSCVVTETDGVSSSYAIDEAELLRLLELSHEHKFPVVPLKSELAVE
LLEKGQVRFWLEAERLSPNGQCKFVFNDKEIKNDEKYKIKVDHKTGLVEMIMDKLEDINE
GTYTVQLQDGKASNQSSLVLIGDVFKNLQKEAEFQRGEWLRKQGPHFVEYLKWEVNNDCS
VLLKCKVANIKKETSIIWYKDDREIMFDEKHDFKDGVCTLLVQQFSKKDAGVYEIVLKDD
RGRDSSTLRLLEKAFGDVISEVCRAAAQTATDLKVQSTEHGIRIYSFVTYYLDDLKIIWY
HKDTKLASTDRVKSGVTGEQLWLQINEPTEKDKGQYTLELFDGKAGHKKSVELSGTVFDE
AFAEFQRLKQAAIAEKNRARVIGGLPDVVTIQEGKSLNLTCNVWGEPVPTVSWLKNDREL
LGDAHLILKFDSGKFASFTITDVRTTDSGKYSILVKNKYGTETGDFTLMISKSCGELCVA
MYVADAAGNVQETLTKDTSKTTGRKTVIHTGGDLKKPIVEELIATEETPDQTLIPESPED
IVTNATTNKETVHAVNISEKNELPLQSCTEVQEISDSDTFQNPND
NT seq
4818 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcgttgtctttacctttctaccagaaacaccaccggcactatgaccgcgattat
cgcaatacacagctatcgtccactatgcaagagtaccgccaagaggaaaagcgcagtact
gcaactcactcccacagagtcagatccaagttttcagatgaaatgttagaaacgtcttct
ggaagccctcaaatgaagagagcgaagcaggactactactctaaggggaaagagaatgaa
gctgttgattatatagtgcctgtcttcagaggatgccatgagcacttcagtggaattacc
agctcaaaggatgaaagaaccaagcagtcaaaatcaagtcatttcgctggagaatctcat
tctgccctaagtaatactattgaagaacatcatattgagaagtccgccatgcacaagtca
agaaaagttgccatccgggaatctgctgaacgcatttcactgaataaagagatttatgac
actcaagattttcacaaaagactgagagaagacagcttgcttcgtttgcctgagtttata
atcaagccaaggtcccacactgtctgggagaaacagaatgtgaagttacattgcaccgtc
tcaggctggcctgttcctcgagttacatggtacaagaacaatgtgagcatcaatgtccac
actgatcctggaaaatatatcatcgacagtaaatacggtgttcattccttggaaattaac
aattgtgactttgatgacactgctcagtatcgtgcttcagccatgaatgcaaagggagaa
ctttcaacttttgcatcagtagttgtgaaaagattcaaagcagagcatggtgatctctca
ttccaccctggaagaattgcacctccatcatatgactacttccctggtgaccctcatatg
aagtttgaagtgcactttgttgataagtttaatgtgtcatttggtaaggaaggtgacaca
ttgagtttgggctgcactgtcatcgttcaccctaacctaaagcgattccagcctgagatc
cagtggtggcgcaatggtatccagctacagccatccaaatgggttgagatgcactggagt
ggtgaaactgctacactgacttttactcacctaaataaggaggatgaaggattgtacact
atacgtgtgctgacaaaatctggctatgaagttcatagtgcatacgtgtttgtcagagat
gctgatgcagaggttgcaggtgccccgggagctcctttggatgtctattgcttagatgcc
aataaagattatgtcattgtaacctggaaacaaccagcagttgatggtggaagctccatc
cttggttactttgttgacagatgtgaagtaggaaccaatcattgggttcagtgcaatgat
accccagtgaagtttgccaggtttcctgtcactgggttgatagaaggtcgttcctacatc
ttccgtgtgcgtgctgttaataacgttggaattagtagaccatcccgtgtatctgagcct
gttgcagccttggatcctgctgataaagcaaggctgaagggaatcccattagccccctgg
acaggacagattattgtaacagaagaagaaccagcagtaaagtgttgctgtcctacgtat
atgccaacagagggtgtggtgcctggacaacctacagaactagctgtgactgaagccacg
cggaattatgtggtcctcagctggaagcctcctggtcaacgtggccacgaaggaatcatg
tattatgtagaaaagtgtgttgcaggcactgaggactggcaaagggttaacccagagatc
cctgtgaagtctccacgatttgcattgtttgatctggctgagggtaaatcatatcgtttc
cgtgtccgctctgctaattctgctggcattagtgagccttctgagccaacagaatttact
gaagtaacggacaaacttgatgttccaaaagctccaagccatgttgtgccttcgaggaac
acagatacttcgatggttgtcacttgggaagagtcaaaagatgcaaaggaattagttggc
tactacattgaagcaagcatcagtggatctggaaaatgggaaccatgcaacaacaaacca
gtgaaaggcaaaagatttatttgtcatggattacaaactggacaattatacaaatttcga
gttagggctgtcaatgcagccgggcttagtcaattttcacatgagtctgaggctctggaa
gtcaaagctgctttaggaggaggagtgcctcatggtgtgtttcctgaacaaaatgctgct
cctccaccaccttatgggattacagttcttgaaagtgttcgtgactccatggtgttggga
tggaaacagcctaaattccaaggtggtgctgatattaccggctactttgtggattatcgt
gaaattattgatggtattcctggaaaatggaaagaagccaatatcaaagctatcactgag
cgggcatacagaatccatgacctgaaggaaaatatggtgtatcagttccaagttcgtgca
ataaacatggcaggtgttggccttccatctctaccgagtgagaaatttacatgtgaagaa
tggactattgctgttccaggaccacctcatgacgtcgtgtacactgaggtcagaaagaac
tcactagtactgctctggaaagctccaatctattctggccgcagtgaggtgactgggtac
tatgctgacatacgagaggcagatgcagatgatgaaaagtggagaagtgtcaacgaaaag
gaaatatcaaagagatacatcaaggtacaaggtctgaaagaaggtgtgaaatatgttttc
cgtgtgagggctgtgaacagggcaggagttggaaagccatctgatttaacagagccagtc
accgcagaaacacctccaggtactaaagagattgctgtcaatgtggatgatgatggagtt
atttctttgacctttgaatgcgctgacatggctgagggttcaaagttcatttggtctaaa
aattatgaagacctcatcgactcatcaagagttacaatggagacaaaaggcggaaagaca
aaaatcattttcaatgacccagggaaggatgacttgggtatctactcctgtgttgtcact
gaaacagatggagtttcttccagctatgccatagatgaagcagagctgctgcgtctgctt
gaacttagtcatgaacataaattcccggttgtgcctctgaagtcagagttagcagttgag
ctgctggagaaaggacaagtgcgcttctggttggaggctgaacgtctctctccaaatgga
caatgtaaatttgtatttaatgacaaggagattaaaaatgatgagaaatataaaataaag
gtggatcataaaactggtttagtggaaatgataatggacaaattggaggatataaatgaa
ggcacttatactgtacagctccaagatggtaaagcaagcaatcaatctagtctcgtttta
attggagatgtgtttaagaatctgcaaaaggaagcagaattccagagaggggagtggctc
aggaaacaaggtcctcattttgttgagtatctcaaatgggaagttaataatgactgcagt
gtacttctgaaatgcaaggtggctaacattaaaaaagagacctcaatcatctggtacaag
gatgatagagagataatgtttgatgagaagcatgacttcaaggatggagtgtgtactttg
ctggttcaacagttttcaaagaaggacgctggtgtttatgaaattgtgctgaaggatgac
aggggaagagattcaagtacgctccgactgcttgaaaaagctttcggtgatgtgataagt
gaagtttgccgtgcagctgctcagactgcaacagatctgaaggtacagagtacagagcat
ggtatcagaatctactcttttgttacttactacctggacgatttgaagatcatctggtat
cacaaagacacaaagcttgcatccacagacagggtaaagagtggtgttacaggagagcag
ctctggctgcagattaatgaacccactgaaaaggataaaggccaatacactcttgaactc
tttgatggaaaagccggacacaaaaaatcagttgaactatcagggacagtttttgatgaa
gcctttgcagaattccagaggctgaaacaggcagcaattgctgaaaaaaatcgtgctcgt
gttatcggaggtttgcctgatgttgttacaattcaagaaggaaagtcacttaatcttact
tgtaatgtctggggagaacctgtgcctacagtttcctggctgaagaatgatagagaactg
ctaggtgacgctcatctaatactgaagtttgactcaggaaaatttgcttccttcactatc
accgatgtcagaaccacagactctggcaaatacagcatcctcgtaaaaaacaaatacggc
actgaaacaggcgactttactctgatgatttccaaatcctgtggagaactttgtgtggct
atgtatgttgctgatgctgctggcaatgttcaggaaactttgaccaaagacacatcaaaa
acaactggaaggaaaactgtcattcatacaggtggagatttgaagaagccaattgttgaa
gaacttattgcaactgaagaaactcctgatcaaacattgattcctgaatcacctgaggat
atagttacaaatgcaactacaaataaggaaacagttcatgcagtcaatatctctgagaaa
aatgagctgccgttacaatcttgtacagaggtgcaagaaatatcagattcagacacattt
caaaatcccaatgattga
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