Chiloscyllium plagiosum (whitespotted bambooshark): 122549080
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Entry
122549080 CDS
T08871
Symbol
itga1
Name
(RefSeq) integrin alpha-1
KO
K06480
integrin alpha 1
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04510
Focal adhesion
cpla04512
ECM-receptor interaction
cpla04810
Regulation of actin cytoskeleton
cpla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122549080 (itga1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122549080 (itga1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
122549080 (itga1)
04810 Regulation of actin cytoskeleton
122549080 (itga1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cpla04147
]
122549080 (itga1)
04515 Cell adhesion molecules [BR:
cpla04515
]
122549080 (itga1)
04090 CD molecules [BR:
cpla04090
]
122549080 (itga1)
Exosome [BR:
cpla04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122549080 (itga1)
Cell adhesion molecules [BR:
cpla04515
]
Integrins
Integrin alpha subunits
122549080 (itga1)
CD molecules [BR:
cpla04090
]
Proteins
122549080 (itga1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
Integrin_A_Ig_2
FG-GAP
Integrin_A_Ig_3
Integrin_A_Ig_1
VWA_2
FG-GAP_3
FG-GAP_2
EIF3I
vWA_SIBA-E
Integrin_alpha
ETF
Plasmod_Pvs28
Motif
Other DBs
NCBI-GeneID:
122549080
NCBI-ProteinID:
XP_043544234
LinkDB
All DBs
Position
1:66443380..66669416
Genome browser
AA seq
1193 aa
AA seq
DB search
MFSKLHTTALFLVVGILQLARSFNVDVKNPLVFTGSQEDMFGYTVKQFENDEGKWLLIGS
PWEGQPINRTGDVYKCPAFKTSNPECVKLNLAEFLTVPNITEVKDNMTLGMSLALNPKAG
FLTCGPLYSYKCGGLYYAAGACLNVSSTFQAVNTVAPTVKACKSRLDIVIVLDGSNSIYP
WTSVNNFLIKLLEKIEIGPQQTQVGIMQYGHQVTHEVSLNQYSTTEDLVEAAKEIKQWGG
NETKTALGIEYARTKEFTEARGMRKGVSKVMVVVTDGESHDSYNLQNVIENCEKDKIRRF
AIAVLGSYNRGNQSADRFLKEIEFIASSPKDKHFFNVSDEKALVTIAEALGEQIFALEAT
SDQQAASFEMEMSQAGFSSHHTEEGIMLGAVGAYDWNGTVLLLKNNDAIIPDNESFLNKS
KEVNEPLAGYLGYSLSSVSVPGDVWYVAGQPRYNHTGQVIIYTSKGKKISIVQTLKGEQI
GSYFGSTVCAIDVDKDSLTDILLVGAPMFMGTEKEEQGRVYVYNLRENEFRYQMILEPLK
QQCGCHSVSGLRAEKFNEVTTDDRKCPHLLKQPCGSRFGTAITAVSDLNLDNYNDVVIGA
PLEDSHKGAVYIFHGSGTTINKKYSQRISASAPAVDFNYFGQSIDGQMDLNDDGLIDITV
GALGGAALFWSRDIAQIRISKLKFQPNKINIQNKSCVIDEKPTVCITAELCFNVNLKSGK
QPSQPIVLEYNITLDSARRTSRGLFRKIHERNIRGNITLPLYSCAEHIFYMLDAPDFLNP
VEILVEFALSNPEEGPVLDASLPNERKALVSFTKDCGEDEECINDLTLTAQADLKGNRMK
PHIVQSNQKKFSLAIKLINQKENAYNSRITVTFSKNIYFIGVEQNDDCMPSESNNVTCKV
GYPFLMPGAEVSFKMKFEFNTSHLLSDVHLHLDATSDSNEQNETLSDNEVTISVPVLYEA
GLLFSRTIKNDHFKIAANETIPDVIKTTEEIGDAADITYMIHNDGVFPIPYLRMTITFPY
TSPANNTLLYLTGITFSSNNTVSCLDSQFVDPLKIQAKNPHKPSPVEEYFINSVGICENN
EGCADFSCTIYPSSLIDFKMSLRIWKPSFVKAKFNSIGLNITATLTIEESSLVVLNKTTE
RTMVTLTVSKESHGGVPIWVIILSVLAGLLLLALVIFALWKAGFFKRPLKEKM
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atgttctcgaagctccacaccactgctctatttctggtcgtaggtatattgcaactggcc
agatcatttaatgttgatgtgaaaaatcctttggtatttactggttcccaagaagatatg
tttggatatactgttaagcagtttgaaaatgatgaagggaaatggcttcttattggctct
ccctgggaaggacaacccataaacagaactggtgatgtctacaaatgtccagcattcaaa
accagcaatccagaatgtgtgaagctaaacttagctgagtttttaactgttcctaacatc
actgaggttaaagacaatatgactttgggaatgtcattggcattaaatcctaaagcaggc
tttctgacatgtggaccactttattcttacaagtgtggaggtctatattatgcagctggt
gcctgtttgaatgtaagctccactttccaagctgtaaacacagtagcgcctacagtgaaa
gcttgcaagtcacggcttgatattgtgattgtacttgatggttcgaacagcatatatcct
tggactagcgttaacaacttccttataaaactgctggaaaaaattgaaattggtcctcag
caaacccaggttggaattatgcaatatggccatcaagtcacacatgaagtcagtctcaat
cagtacagcacaacagaggatcttgtggaagctgctaaagagataaagcagtggggtgga
aatgagacaaaaacagcccttggaattgagtatgccaggacaaaagaattcacagaagca
cgaggaatgcgaaaaggagtttcgaaggtgatggtggtggtaactgatggtgaatcacat
gacagctacaatctacaaaacgtgattgaaaactgtgaaaaggataaaattcggaggttt
gcgattgcggtgcttggcagctacaacagaggaaatcaaagtgctgacagatttctaaaa
gaaatagagtttatcgcaagttcacctaaagataaacattttttcaatgtatcagatgaa
aaagcactggtgacaatagcagaagcccttggagaacaaatctttgctttggaagcaact
agtgaccagcaagctgcctcttttgagatggaaatgtcacaagctgggttcagttcacac
catacagaggaaggcatcatgttaggagcggttggagcttacgattggaatggaacagtg
cttttactaaaaaacaatgacgccattatcccagacaatgaatcatttttgaacaaatca
aaagaagttaatgaacctcttgctggatatttaggttactctctgagctctgtctcagtt
cctggggatgtgtggtatgttgctgggcaacctcgatataatcataccggacaagttatt
atttatacttcaaagggaaagaaaataagcattgtacagactctgaaaggagaacagatt
ggttcatactttggcagcactgtgtgtgcgattgacgtcgataaagattcgttaactgat
attcttcttgttggagctcctatgtttatgggaactgagaaagaagagcaagggagagtt
tatgtctacaatctgagagagaatgagtttcgatatcaaatgatccttgagccattaaaa
cagcagtgtggttgtcactctgtctcaggtctccgtgcagagaaattcaatgaggttaca
actgatgatcggaaatgcccccatctcttgaaacaaccatgtggttctcgttttggaaca
gccataactgcagtttcagatcttaacctggataactacaatgatgttgtcattggggca
cctttggaagacagccacaagggtgcagtctacatcttccatggatctggcacaaccatc
aacaaaaaatattcacagcgcatctctgcatctgcaccggctgttgacttcaattacttt
ggccaatcaatcgatgggcaaatggatttaaatgatgatggtctaatcgatattacagtt
ggagcactaggtggtgctgccctcttctggtcccgtgatatagctcaaatcaggattagc
aaactgaagtttcaacccaacaagatcaatatccagaacaagagttgtgtgattgatgag
aagccaacagtgtgtattacagcagagctttgtttcaatgttaacctgaagtctggtaaa
cagccatcacaaccaattgttcttgaatacaacatcacattagactctgcacgccgtacc
tccagagggctgtttaggaaaatacatgaaagaaatatccgaggaaatatcactttaccc
ttatatagctgtgctgaacacatcttctacatgttggatgctccagattttctaaacccc
gtggagattctggtggagtttgcattatcaaatccagaggaaggaccagttctagatgcc
agcttaccaaatgaaaggaaagctttggtatctttcacaaaggattgtggagaagatgaa
gaatgcatcaatgatctgacacttacagcacaagcagacttgaagggtaatagaatgaaa
ccccacatcgttcaatccaatcagaagaagttcagtctggcgattaaattaataaaccaa
aaggaaaatgcctacaactcaagaataactgtgaccttttctaaaaatatatatttcatt
ggagttgagcaaaatgatgattgcatgccatcagaatccaacaatgtgacatgtaaagtg
ggatatccctttctcatgcctggagcagaggtttcttttaaaatgaaatttgagttcaat
acctctcatctcctcagtgatgttcacttacacctggatgcaacaagtgacagcaatgaa
caaaatgaaacattaagtgacaatgaagtcaccatctcagttccagtattgtatgaagct
ggactgctcttttcaaggactataaagaacgaccattttaaaatagcagccaatgagaca
attcctgatgttattaaaacgacagaggagattggtgatgcagcagacatcacttatatg
atccacaatgatggggtttttccaattccataccttagaatgactataacattcccatac
acctctcctgcgaacaatactcttctatatttgacaggaattacgttttcttctaataat
acagtcagttgccttgactctcaatttgtggatcccctgaagatacaagctaaaaaccct
cacaaaccatctccagtggaagagtacttcatcaactcagttgggatatgtgaaaataat
gaaggatgtgctgacttctcctgtactatatatccatcaagtctgattgattttaaaatg
tcattgagaatatggaaaccttcttttgttaaagcaaaatttaattcaataggcctaaat
attactgctacactcacaattgaagaatcatcactggtggtactaaacaaaacaacagaa
agaacaatggtgactttaactgtatcgaaagaatcccatggaggtgtcccaatttgggtg
attatactcagtgttcttgctggcctgctgcttctagcacttgtaatatttgcactgtgg
aaggctggatttttcaaaagacctttaaaagaaaagatgtga
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integrated database retrieval system
