Chiloscyllium plagiosum (whitespotted bambooshark): 122549093
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Entry
122549093 CDS
T08871
Symbol
rb1cc1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122549093 (rb1cc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cpla01009
]
122549093 (rb1cc1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpla04131
]
122549093 (rb1cc1)
03029 Mitochondrial biogenesis [BR:
cpla03029
]
122549093 (rb1cc1)
Protein phosphatases and associated proteins [BR:
cpla01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122549093 (rb1cc1)
Membrane trafficking [BR:
cpla04131
]
Autophagy
Autophagosome formation proteins
ULK complex
122549093 (rb1cc1)
Mitochondrial biogenesis [BR:
cpla03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
122549093 (rb1cc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
122549093
NCBI-ProteinID:
XP_043544256
LinkDB
All DBs
Position
4:complement(64657023..64851715)
Genome browser
AA seq
1595 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELAVQTVADLKHAIQAKYKIATQHQVLVVNGGECMVADRRVC
SYSAGTDTNPIFLYNKEMILCDRAPTIPKTTFSAENEMGLKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCERLVHDEHLQHQGWAAIMANLEDCTHSFQKLLAKFENAYNSYEH
SVEDIKQKLTNLGTAVSVMAKIPLLECLTRHSYRECQERLKLPTQKGSTEEESEDVKSTS
SALCSVKPTVNRNSPSSSISFGCSAQNSVIQQEEKDNETIEDRTQKTEAEGESKEVDDQA
FFNVSLLDWINVQDRPNDVESLVRKCFDSMNRLDPEILQPFLTECHETIVKLDNQNMKAI
KGLEDRLYALDQMIASCNRLVNEQKELAQGFLANQQRAENLKDPSVLPDLCLSHANQLMI
MLTNHKKLLDIKQKCTTAKQELANNLQVRLKWCCYVMLHADQNGEKLQALLRLLTELQER
IRIVEALSNVPQMYCLAVVEVVRRKVFTKHYREWASALVKEGKQFYEAERVKRESFGKLF
RRSFLRNRLFKGLDSWPPSSFCTHKPRKFDFELPDVSLTDLQFLQSCCPSEVQPFLRIPT
LCDFEPLQQHHQILRNLVKAAQSLDEMSQTITDLLTEQKVSLDQTSVTTPTKHKLESTTR
TKTTSSRSTSTLSLQGPICPPANVPASLEELSPDSIDAHTFDFETIPHPNLEQVLKQGSI
DMDSLAESPESDFVSAVNEFMIEESSTSPNINSDPQSPEMMLESLYSSVINAIDNRRMQD
TTFGENVDSKEVATLKVHIEKYRLITEMSQLHFINIKKDLNHFRELVQKEQCDFSSSMKN
VSEELRSLIETVKCRVEVGAKENYQQKLEILRKDYEDQMDKLNVELVTAQQNTDKLKKDL
LELEDYIKQKDCEFIEVRTENETLLCLQISKDKEINDLVEGRKKQETEIQELRQSRESLL
EELNRLHLKADHEMKCLREELQTLEQSHLKDLEDDLKVRHHQELKKLLADHSKQQEQISK
ENETRLDHVQQSLTIKLQEREQELNEFKLNVSELSDFRCNLEAELALKEVETEKLKQRLK
ETQVQQEEIAKCQVIKETDKYREEITDLKQQLQLKLEEYKVGLAEERILMTTEKDQCISD
LLDRQEQEKAILKAELDKLDVMRQQALDMEVALRGQVEELTTKLKEYLKTMETEREEMMS
EKQRIAFEIEAKYKATIRDLEEEKKQLLNTSQEREEFMRNKMHEDCECKKQALEQELQIK
NQQSESPFEDQSKAESYDPVSSTSVKWAPPSAIADLTGKFQEEKANLLDQLEKRNEELQS
LKTSLIAEQQTNFNTVLTREKMKREQIINELNDKLRKLTQQQEKDRVLIETLSADRATLL
QEKKQLDEELNRLRSNALVCSAFPSPGTSGAESSVPGPDIPFDSERLAPAAAVAEEIRIE
SAMEASTMTVRETIQMSEEKHRIMILERTLQMKEEENKRLNQRLMSQSMSSVSSRHSDKI
AIRDFQVGDLVLIILDERHDNYVLFTVGPTLYFLHSESLGALDLKPVPGSSRRPWVLGKV
MEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNKKV
NT seq
4788 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtatgtatttctggttaacactggaactactcttacatttgacacagaactt
gctgtacagactgttgcagatctgaagcatgcaatccaagctaaatataagatcgcgact
cagcatcaagtgttggtcgtcaatggaggagagtgcatggttgctgacagacgtgtttgt
agctacagtgctgggacggatacaaatcccatatttctgtacaacaaagagatgattctg
tgtgatcgtgcaccaactatacctaagacaacattttctgcagaaaatgagatggggctt
aaggtagaggagtcccttatgatgccggctgtatttcacacagtagcctctagaactcaa
cttgctgtggagatgtatgaagtagcaaagaagctttgttcattctgtgaaagattggtc
catgatgaacatcttcagcatcaaggttgggctgccattatggccaatttggaggactgc
acacattctttccaaaagctgctggcaaagtttgaaaatgcatacaacagttacgaacat
tctgtggaagatattaagcaaaaacttacaaacttaggcactgcagtctctgtaatggcc
aagataccactgttggaatgcctgaccaggcacagttaccgagaatgtcaggaaagactg
aaattaccaacacagaaaggaagtacagaagaagaaagtgaggatgtgaaatctaccagt
tctgcactttgttctgttaaacctacagttaacagaaattcgccctctagttccatatct
ttcggatgttctgcacagaatagtgttatccaacaggaagaaaaggacaatgagaccatt
gaagacagaacacagaaaactgaagcagaaggtgaatccaaagaagtagatgaccaagct
tttttcaatgtttccttattggattggattaatgtacaagatagaccaaatgatgtggaa
tcactggtcaggaaatgctttgattcaatgaaccgacttgatccagaaattcttcagcca
tttttgacagagtgtcatgaaacaattgtcaaacttgataatcagaatatgaaggctatt
aagggacttgaggacagactatatgccctggatcaaatgatagccagctgtaacagactg
gtgaatgaacaaaaagaattagctcagggatttttagcaaatcagcagagggctgaaaac
ctgaaagacccatcagttcttcctgatttatgtctgagtcatgcaaatcagttaatgatt
atgttaacaaaccacaagaaactgctggatattaaacagaaatgtaccactgctaagcag
gaacttgcaaataacttacaagtcagattgaaatggtgctgttacgtgatgcttcatgca
gatcagaatggtgaaaaactccaggctttgctaaggcttctgacagaactgcaagagaga
atacgaattgttgaggcacttagcaatgttcctcaaatgtactgccttgctgtagttgag
gtagtaaggcggaaagtgttcactaaacattacagagagtgggccagtgctcttgtaaaa
gaaggaaaacagttctacgaagctgagcgagtaaaaagggaatcctttgggaaactgttt
cgaagatcatttcttagaaatcgcttgtttaaggggctcgactcttggccaccatcatcc
ttctgtacacacaagcctcgaaagtttgactttgagcttcctgatgtatcattaactgac
ttacaatttctgcagtcctgctgtccttcggaagttcagccttttctcaggattcctaca
ctgtgtgactttgaaccattgcagcagcatcatcaaattcttcgtaatttagtcaaagct
gctcagagtttggatgaaatgtcccagaccatcactgacttgttgactgaacaaaaggtg
tctctagatcaaacttcagtaacaacaccaacaaaacacaagttggaaagcacaaccaga
actaaaactacctcttctagatccacatctacacttagccttcagggaccaatctgccca
cctgctaacgttcctgcctcattagaagagctgtctcctgatagtattgatgcccatacg
tttgattttgaaaccattcctcatccaaatttagaacaagttctcaaacaaggatctata
gatatggactcattggcagaaagtccagagtctgattttgtgtcagctgtaaatgaattt
atgattgaggagagctcaacttcacccaacataaacagtgatccacaaagtcctgaaatg
atgcttgaatcattatattcttcagttattaatgccattgataatcgacgcatgcaggat
acaacttttggtgaaaatgtggattctaaagaagttgcaactcttaaagtgcatatagaa
aaatacaggcttatcactgaaatgtctcagttgcattttataaacattaagaaagacctt
aatcatttcagagagcttgttcagaaggagcagtgtgattttagtagttcaatgaaaaat
gtaagcgaagaattaagaagcctaattgaaactgtaaaatgtagagttgaagtgggagca
aaagaaaattatcaacaaaaattagaaattttaagaaaggattacgaagatcaaatggac
aaattgaatgttgagttggtgactgctcagcaaaatactgacaagctgaaaaaagatttg
ttggaacttgaagattacataaaacagaaggattgtgagtttattgaggtaagaactgaa
aatgaaactctcttatgtttacaaattagtaaagataaagaaataaatgacttagtggaa
ggcagaaaaaagcaagagactgaaatccaagaactcagacaatcgagagagagtttattg
gaagaattaaacagacttcatttaaaggctgaccatgaaatgaagtgcttaagggaagag
cttcagactcttgaacaaagtcatttgaaggatcttgaagatgacctgaaagtcaggcat
catcaagaattgaaaaaattactggctgatcatagtaagcaacaagaacaaatctcaaaa
gaaaatgaaacaaggttagatcatgtgcagcagtctcttacaatcaagctccaggagcga
gagcaagaactaaatgaatttaaattgaacgtatccgaactttctgactttaggtgcaat
ttggaagctgaattggctttgaaggaagtggaaactgagaaattaaagcagcgcttgaaa
gagactcaagtccaacaagaggagattgcaaaatgtcaagtcataaaagaaactgataaa
tatagagaagagataactgacttgaagcagcaactccagctaaaacttgaggaatacaag
gtaggccttgcagaagaaagaatactaatgactacagagaaagatcagtgtatttctgat
ctgctagaccggcaagaacaggagaaggccatacttaaagcagaactagataagttggat
gtaatgagacagcaagcgctggacatggaggtagcattaaggggacaagttgaagagctc
accactaaactgaaagaatatttgaaaacaatggaaaccgaaagggaggaaatgatgtct
gaaaagcagcgaattgcatttgaaatagaagcaaaatacaaagcaactattcgtgatctt
gaagaagagaagaaacagctgctcaacacaagccaggaaagagaggaatttatgagaaat
aaaatgcatgaagattgtgaatgcaaaaaacaagcacttgagcaagaattgcaaataaaa
aatcaacagtctgaaagtccatttgaagatcaaagtaaagctgagagctatgatccagtt
tcatctacatcagtaaaatgggcccctccaagtgccattgctgaccttacaggaaaattt
caagaagagaaggccaacttactagaccaactagaaaaaaggaatgaagaactccagagc
cttaaaacatcactgatagctgaacaacagactaacttcaatacagtcctaactcgagaa
aaaatgaagagagaacaaattatcaatgagttgaatgacaaactgagaaagctaacccag
cagcaagaaaaagatagagttttgatagaaaccctttctgcagacagagctactttacta
caagaaaagaaacagcttgatgaggagctgaacagactgcgaagtaatgcacttgtttgt
tctgcctttccatcacctggaacttctggtgctgagtcctcggttcctgggcctgacatt
ccatttgattcagaacgacttgcacccgctgctgcagtagcagaagaaataaggatagaa
tctgcaatggaagcaagcactatgactgtacgtgaaaccatccaaatgtctgaagaaaaa
cataggattatgattttagaaagaacattacaaatgaaagaagaggagaataaacgttta
aatcaaagattgatgtctcagagcatgtcttctgtatcttccagacattctgacaaaata
gctattcgagatttccaagttggggatttagtacttattatcttggatgaacgtcatgat
aactacgttctatttactgttggcccaaccctttatttcttacattcagagtcactggga
gcactagatcttaagccagttccaggttcttccaggaggccttgggtactgggaaaagtg
atggaaaaagaatattgtcaagctaaaaaggctcaaaacagatttaaagttcctctggga
acaaaattctacagagtgaaagcagtaccctggaacaagaaagtataa
DBGET
integrated database retrieval system
