Chiloscyllium plagiosum (whitespotted bambooshark): 122549293
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Entry
122549293 CDS
T08871
Symbol
mlh1
Name
(RefSeq) DNA mismatch repair protein Mlh1
KO
K08734
DNA mismatch repair protein MLH1
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03430
Mismatch repair
cpla03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
122549293 (mlh1)
03460 Fanconi anemia pathway
122549293 (mlh1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpla03400
]
122549293 (mlh1)
DNA repair and recombination proteins [BR:
cpla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
122549293 (mlh1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
122549293
NCBI-ProteinID:
XP_043544770
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Position
4:105886196..105938675
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AA seq
746 aa
AA seq
DB search
MVTPGVIRRLEETVVNRIAAGEVIQRPANAIKEMVENSLDAKSTSIQVTVKDGGLKLIQI
QDNGTGIRKEDLEILCERFTTSKLQKFEDLASIATYGFRGEALASISHVAHVTVTTKTAD
GKCAFRASYCDGRLKAPPKPCAGNQGTQITVEDLFYNIATRRKALKNPSDEYSRIVEVMS
RYAIHNSGVSFAVKKQGETVADVRTLPNASTLDNIRTIFGNAVSRELIEVCFEDPKFAFT
MKGYISNANYSVKKCIFLLFINHRLVESTALRKAIETVYAAYLPKNTHPFLYLSLEILPQ
NVDVNVHPTKHEVHFLHEDSIIESVQQHIESKLLGSNSSRTYFTQTLLPGPTITSNDFIK
PSVASATLPSSSDKPYAHQMVRTDSKEQKIDAFLQPINKPQEALPTTVSVDGGTVCQDSE
MEDLSDIDLLAAEKVGSSSTNIQKPLHPCNDDPSSAPARKRSRVDSPGEIKEANSSHEMT
AAHLPKRRIINLTSVLTLQGETNNQNHAGLQDMLQNHSFVGCVNPQWALVQYQTKLYLIN
TTKLSQELFYQILIYDFGNFGVLKLSSPAPLYELAMLALDSPESGWTEEDGPKEGLAEYI
VDFLKTKSEMLQDYFSLGIDEEGNLTGLPLLLENYVPALEGLPMFILRLATEVNWDEEKE
CFEKLSKECGMFYSIRKEYTLDTESQVSPNLGQQEFGSDKPWKWTIEHVVSKAFRTLLLP
PKHFAEDGSILQLANLPDLYKVFERC
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atggtgactcccggggtgatccgcaggctggaggagacggtggtgaataggattgctgct
ggcgaggtgatccagagacctgcgaatgccattaaagagatggtggagaacagtttggat
gccaaatctacaagtattcaggttactgtaaaggatggtgggctgaagttgattcagatc
caggataatgggaccggcatcaggaaagaagatttggaaatactttgtgaaagatttaca
acaagcaagttacagaaatttgaagatcttgctagtattgctacttatggatttagagga
gaggctcttgccagcataagccatgtggcacatgtcactgtaacaactaaaactgctgat
ggaaaatgtgcgttcagagctagctactgtgacgggaggttaaaggctcctccaaagcca
tgtgctggaaaccagggtacacagatcaccgtggaagatcttttttacaatattgccaca
agaaggaaggctctgaaaaatcccagtgatgagtattctagaatcgtggaagttatgagc
aggtatgcaatccacaattcaggagtgagctttgctgtgaagaagcaaggtgaaactgtt
gctgatgtgagaacattgcctaatgcctcaactctggacaatattcgaacaatatttggg
aatgctgtaagcagggaattaattgaagtatgttttgaagatccaaaatttgctttcaca
atgaaaggctatatatcaaatgcgaactattctgtgaaaaagtgtatctttttacttttc
atcaatcatcgcttggtggaatccactgctttacggaaggcaatcgaaactgtctatgca
gcctatcttcctaaaaatacacatcccttcctgtatctgagccttgaaatattgccacag
aatgttgatgtaaatgttcatcccacgaagcatgaagtacactttctccatgaggacagt
atcatcgagagtgtgcaacaacatattgaaagtaagctacttggttccaactcctcaaga
acctacttcacacagactttactgcctggcccaaccataacctccaatgactttatcaag
ccttcagtagcatcagccacacttccaagttcgagtgacaaaccatatgctcatcaaatg
gtgcgcacagactccaaggaacaaaaaattgatgcctttctacaaccaatcaacaaacca
caggaggcactacccaccactgtttctgttgatggagggactgtgtgtcaggactctgag
atggaggacctaagtgatattgacttacttgctgcggaaaaagttgggagctcaagtaca
aacattcagaaacccttgcatccatgcaatgatgacccatccagtgccccagccaggaaa
cgatcaagggttgattcaccaggtgagataaaagaagcgaactccagccatgagatgaca
gctgcccatcttccaaagaggagaattattaacttaaccagtgttctcaccctgcaaggg
gagaccaacaatcagaaccatgcaggcctacaagacatgttacagaatcattcatttgtt
ggttgtgtaaatcctcagtgggcactggtgcagtatcaaacaaaactttacctgatcaat
actactaaactcagtcaggaattattctaccagatcttaatctatgactttggtaatttt
ggagtgttgaagttgtcgagccctgcccctttgtatgaattggcaatgctagcattggac
agtccagaaagcggctggacagaagaagacggtcccaaagaaggattggcagagtatatt
gttgattttttgaaaacaaaatctgaaatgctacaagattacttttcccttggtattgat
gaggagggaaacctgactggattacctctactcttggaaaactatgttccagctctggag
gggttgccaatgttcatcctgcgtctcgctacagaggtgaactgggatgaagaaaaggag
tgttttgaaaaattaagcaaggaatgtggtatgttttactccatcagaaaagaatataca
ctggatacagaatctcaggtgtcaccaaatttgggtcagcaggagtttggtagtgacaag
ccctggaagtggactatagaacatgttgtttccaaagctttcagaactctcctccttcca
ccgaaacacttcgcagaggatggatccatcctgcagcttgccaatctgcctgatctgtac
aaagtatttgagagatgttaa
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