KEGG   Chiloscyllium plagiosum (whitespotted bambooshark): 122549321
Entry
122549321         CDS       T08871                                 
Symbol
sdha
Name
(RefSeq) succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial isoform X1
  KO
K00234  succinate dehydrogenase (ubiquinone) flavoprotein subunit [EC:1.3.5.1]
Organism
cpla  Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla00020  Citrate cycle (TCA cycle)
cpla00190  Oxidative phosphorylation
cpla01100  Metabolic pathways
cpla01200  Carbon metabolism
Brite
KEGG Orthology (KO) [BR:cpla00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    122549321 (sdha)
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    122549321 (sdha)
Enzymes [BR:cpla01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.5  With a quinone or related compound as acceptor
    1.3.5.1  succinate dehydrogenase
     122549321 (sdha)
SSDB
Motif
Pfam: FAD_binding_2 Succ_DH_flav_C Thi4 Pyr_redox_2 GIDA DAO HI0933_like FAD_binding_3
Other DBs
NCBI-GeneID: 122549321
NCBI-ProteinID: XP_043544885
LinkDB
Position
4:110906304..110953233
AA seq 665 aa
MAARCLVSALGKRRFKVGLRQIPAVYQNAACRFHFAVNGKHNKNANKVSNAISTQYPVVD
HEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMESDDW
RWHFYDTVKGSDWLGDQDAIHYMTEQAPAAVIELENYGMPFSRTEAGKIYQRAFGGQSLQ
FGKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCM
EDGSIHRFRANNTVLATGGYGRTYFSCTSAHTSTGDGSAMVTRAGLPNQDLEFVQFHPTG
IYGAGCLITEGCRGEGGILINREGERFMERYAPVAKDLASRDVVSRSMTIEIREGRGCGP
DKDHVYLQLHHLPPEQLAMRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGVPTNYKG
QVINHTNGKDAVVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALTIAETCKPGD
AVAPIKPNAGEESVANLDKLRFADGNTRTSELRIGMQKCMQSHAAVFRTGSVLKEGCEQL
SNLYSSLDDIKTFDRGIVWNSDLVETLELQNLMLCALQTIYAAEARKESRGAHAREDFKM
RIDEYDFSKPLQDQEKKPFDEHWRKHTLCYVDPKTGKVTLEYRPVIDTTLDAKDCATVPP
AIRSY
NT seq 1998 nt   +upstreamnt  +downstreamnt
atggcggcgcgttgcttggtgtccgctctggggaagcggcgtttcaaggtgggccttaga
cagattcctgcagtgtaccaaaatgcagcttgcagattccactttgctgtcaatgggaaa
cataataaaaatgcaaacaaagtttcaaatgcaatttctactcagtacccagtggtagat
catgaatttgatgcggtggttgttggagctggtggtgctggtttacgagcagcttttggt
ttatctgaagctggtttcaacactgcttgtgttacaaaactctttccaactagatctcac
acagtcgctgctcagggtggaataaatgctgcactgggcaatatggagagtgatgattgg
aggtggcatttttatgatactgttaaaggatctgattggctgggagatcaagatgcaatc
cactatatgacagaacaggcaccagctgccgttattgagctggaaaattatggaatgcct
ttcagtagaaccgaggcaggcaagatttatcaacgtgcatttggtgggcaaagcctgcaa
tttggaaaaggggggcaggctcaccgctgctgttgtgttgcagaccggacagggcactct
ttactgcacactctgtatggcaggtcattgcggtatgataccagctattttgttgaatac
tttgccttggatcttctgatggagaatggagaatgtcgaggtgtcatcgcattgtgtatg
gaagacggttctattcaccgatttagagctaataatactgtgcttgccactggtggatat
ggaagaacttacttcagttgtacgtcagctcatacaagtactggagatggaagtgccatg
gtcactcgagctgggttacccaatcaggacttggaatttgtccaatttcaccccacagga
atttatggtgctggttgcctcatcactgaaggatgtcgtggtgaaggtggaattctcatc
aaccgtgagggagagagattcatggagcgatatgctccagttgcaaaagatcttgcttcg
agagatgtagtatcacgatctatgaccattgaaattcgtgaagggcgaggttgcggccct
gataaggatcatgtgtacttacaactgcaccacctgccccctgagcagcttgcaatgcgg
ctgcctggtatttcagaaactgctatgatttttgctggcgtggatgttaccaaagagcca
attccagtccttcctacagttcattacaatatgggaggtgtccccaccaactacaaaggc
caggtgattaaccacacaaatggtaaagatgctgtggttcctggcctctatgcctgtggt
gaagctgcatgtgcttcagttcatggagctaaccgacttggagcaaattccctcctcgac
ttagtggtatttggccgtgcctgtgccctgaccatcgcggaaacttgcaagccaggagat
gctgttgcaccgattaaaccaaatgctggagaggagtctgtagccaatcttgacaagctg
cgatttgctgatggaaatactcgtacatctgagctcagaattggcatgcagaagtgcatg
caaagtcacgcagctgtgttccgcacaggctctgtactaaaagaaggttgtgagcagtta
agcaatttgtacagctctctggatgacatcaagacatttgacagaggtattgtttggaac
tctgacctagttgagaccctggaactgcagaatttgatgctttgtgcccttcagactatc
tatgctgcagaggctcgcaaagagagcaggggagcacacgctagagaggatttcaagatg
agaattgatgagtatgacttttcaaagccattgcaagaccaagagaagaaaccatttgat
gaacattggagaaagcacacactctgttatgtggatcccaagactggaaaggttactctg
gaatacagacctgtaattgacacaacgttggatgcaaaagactgtgccacagttccacca
gcaattcgttcttattaa

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