Chiloscyllium plagiosum (whitespotted bambooshark): 122549435
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Entry
122549435 CDS
T08871
Symbol
vcpip1
Name
(RefSeq) deubiquitinating protein VCPIP1
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cpla01002
]
122549435 (vcpip1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpla04121
]
122549435 (vcpip1)
Enzymes [BR:
cpla01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122549435 (vcpip1)
Peptidases and inhibitors [BR:
cpla01002
]
Cysteine peptidases
Family C64
122549435 (vcpip1)
Ubiquitin system [BR:
cpla04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
122549435 (vcpip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VCIP135_N
OTU
OTU1_UBXL
ubiquitin
Motif
Other DBs
NCBI-GeneID:
122549435
NCBI-ProteinID:
XP_043545199
LinkDB
All DBs
Position
4:132398888..132428782
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AA seq
1204 aa
AA seq
DB search
MLQGSKKKDKRILSGTCPDPKCQARLFFPAYGVSIECTECGQRHEQRNLVNIEEVTDPDV
VLHNLLRNALLGVTAPKKGTEMVKVMGLSNYHCKLLSPILTRYGMDKQTGKAKLLKAMNQ
GEMFDCALLGDRAFLIDPEHIGTMGYGKDRSGSLLYLHDTLEEIKKANSNQERLIPVHVD
GDGHCLVHAVSRALVGRELFWHALRENLKQHFKVNLDRYKALFHDFIDAAEWEDIINECD
PLFVPPEGVPLGLRNIHIFGLANVLHRPIILLDSLSGMRSCGDYSATFLPGLVPAEKCWG
KDGQLNKPICIAWSSSGRNHYIPLVGIKRGPLPRLPLKLLPKAWGVPQELIRKYIQFEDD
NCILGGDRSLQDKYLQRLVAAMEEIFLKTHDIHPSLVADVHQYIYRRTGVIGIQPEDVTE
AAKKAVIENRLQKCLICGALSELHVPAEWLAPGGKLYNLATSTYGQLKPDKNYSFPVNHL
VCSYDPKEDVLVPDYNLSHLTSCNWCHGTSMRHVKGDGSVVYLDGDRTNTRSAGGKCGCG
YKHFWEGKEYDNLPEAFPITLEWNGRVVRETVYWFQYESDVTLNSNVYDVAMKLVTKHFP
GEFGSEILIQKVVNTILHHTAKKNPDEYTPVTVEGAHSRRVGDLQDEPASEPHLPTKIIL
MGQKSKTLHKEELNMSKTERGIQQNITDHAATVQKRKTDKLRQDQKVPGQPSSPGIVKDG
SSSAPATPIKSPYSTSPSKVKKIRVTTSDGRQATLTLQASVTFSEFQESIAKEFSLPPRL
QCIRHGFPLKELHPPKVGWENEVLPLQHGDCVSVEILKDSKESVPAASTSAAHSWKTEEP
EASGRASVKEMQEHIDLEMSSLCLLATLMGEDVWSYAKKLPHLFEQGGVFYNTMKKDVGL
ADGKHFTLPHLPGKTFVYNGTDDRLELCIDPAGHIPIGPNIDNLIKEALNQLRSEGGSRS
REGSPSSHGGMKLGSGGVVRKKSEQMPNVTAFQGKGHSLGTASSSPQLEQRHSREIQVPR
KQSTGSSSGTDLSYGIDQSSPKHGASPPKSSSGDSQLIRMAPGFVTMRDGRQLDANLIEA
QRKKLQEMVSSIQASMDKHMKDQNVEQLINSDAPDSKLRSTTSSAQSVMRTESLQTDALE
TPSITPQEGDNENLSMETTAVGVELSSHPSVPSSKSQNVNLLNEDLEEMDSQEIEGTIEP
MDHS
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgttgcaaggatctaagaaaaaagacaaacgtattctgtcgggtacgtgtccggatccc
aagtgccaggctcggttgtttttcccagcctatggagtcagtatagaatgtactgaatgc
ggccagcgccatgaacaaagaaatctagtcaatatagaggaagtcaccgacccagatgtg
gtgctgcacaacctgctaaggaatgctttgctgggagtcaccgccccaaaaaagggcacc
gaaatggtgaaagtgatgggactgtccaattaccactgtaaactgctgtctcccatcttg
acccggtatggcatggataagcaaactgggaaagccaagctcttgaaagcgatgaaccaa
ggggaaatgtttgattgtgccctgttgggtgacagagctttccttattgatccagagcat
attgggactatgggttatggaaaagaccgttcagggagtctcttatacctccacgatacc
cttgaggaaatcaagaaggcaaatagtaatcaagagcgtttaatccctgtacatgtggat
ggtgatggtcattgtttagttcatgctgtgtccagggctttagtaggaagagaacttttt
tggcatgctttgcgtgaaaatctcaaacagcattttaaggtaaacctggatcgttacaaa
gcattatttcatgatttcattgatgcagcagaatgggaggatatcattaacgagtgtgat
cctttgtttgttcctcctgaaggagtacctttaggtctacgtaatattcatatctttggg
ttggccaatgtgttacatcgtccaataattttgttggattccctgagtggaatgagaagt
tgtggtgattattcagctacttttctcccaggattagtccctgcagaaaaatgttggggt
aaggatggacagctaaataaacctatttgtattgcatggagcagttcaggacgcaaccat
tatatacctttggttgggataaaaaggggtcctttaccaaggcttcctttgaaactgttg
cccaaagcttggggtgtaccacaggagcttattcggaagtacatccagtttgaagatgac
aactgtattttaggaggtgaccgaagtttgcaggacaagtacttgcagaggctagttgct
gccatggaagaaattttcttgaagacacatgatattcacccttctctggtagcagatgtt
catcagtatatatacagaaggacaggggtgattggaatacaacctgaagatgttactgaa
gctgcaaagaaggccgtaattgaaaatcgtttgcagaaatgtttgatttgtggtgctctt
tctgaacttcatgtgcctgctgaatggttagctccaggaggaaagctgtacaacttagct
acaagcacctatggccaactgaaaccagacaaaaattacagctttcctgtcaatcatctg
gtctgctcatatgatcctaaagaagatgtactggtgccagattacaatttgagtcactta
acatcttgcaactggtgtcatggtacttctatgcgccatgtcaaaggggatggttctgtt
gtgtatttagatggagatcgaactaataccagatctgctggaggtaaatgtggttgtggc
tacaagcatttctgggaaggaaaggaatatgataacctacctgaggcattcccaataact
ttggaatggaatgggagagtggttcgagaaactgtttattggtttcagtatgaaagtgat
gtgacgctaaacagtaatgtttatgatgttgctatgaagcttgttactaagcattttcct
ggtgaatttggaagtgaaattttgattcagaaggttgttaacactatattacatcataca
gctaaaaaaaatcctgatgaatatactccggtcactgttgaaggggcacacagtcgtaga
gttggtgacttgcaagatgaaccagcatcagaaccacatttaccaaccaaaataatttta
atgggtcagaaatcaaagactctgcataaagaagaactgaacatgagcaaaactgaacga
ggtattcagcagaatattaccgaccatgcagctactgtgcaaaagcggaaaactgacaaa
ttacgccaagatcagaaggtaccaggccaaccatcctctcctggaattgttaaagatggg
tcatcgtctgctccagccactcccattaagtccccttattccacatcaccatccaaagta
aaaaagattagagtaaccactagcgatggacgacaggcaacactgactcttcaagcatct
gtaacattttctgagtttcaagaaagcatagctaaagaatttagccttcccccgcgtttg
caatgtatacggcatggctttcctctgaaggaactgcacccacctaaagtgggatgggag
aatgaggttttgcctctgcaacacggtgattgtgtttctgttgagattctgaaagacagc
aaggaatctgttcctgctgcttcaacatctgcagctcattcctggaaaactgaagaacct
gaagcatctggtagagcttccgttaaggagatgcaagagcatattgatcttgaaatgtct
tccctctgccttctagcaaccttaatgggtgaagatgtttggtcttatgcaaagaagtta
ccacatttatttgaacaaggtggagtattctataacacaatgaagaaagatgtaggtttg
gcagatggcaagcatttcactcttccccaccttcctggtaagacatttgtgtataatgga
acagatgatagactggagctgtgcattgatccagcagggcacattcccattggtcccaac
attgacaatctgatcaaagaggccttaaatcaattacggtctgagggagggtcaagaagt
agggaaggaagtccttcctcacatggaggcatgaaacttggcagtggaggagtggtccga
aaaaaatctgaacaaatgccaaatgtcacggctttccaaggaaaaggtcattcccttgga
actgcttcaagtagcccacagctggaacagaggcatagcagggaaatccaggtgcctagg
aaacaaagcactggtagttcatcaggaactgatcttagttatggtattgaccagtctagt
cccaaacatggagcttctccacccaaatccagcagtggggacagccagctaatacgaatg
gcacctggctttgtaacgatgagagacggtaggcaacttgacgccaatttaattgaagca
caacgtaaaaaattgcaggagatggtatcctccattcaagcttccatggataaacatatg
aaggatcaaaatgtggaacaattgataaatagtgatgccccagattcaaaactacgctct
accacttcctcagctcagtcagtaatgagaactgaaagccttcaaactgatgcactggag
acaccatcaatcactccacaagaaggtgacaatgagaatttgagcatggaaacaacagct
gttggtgtggaattatcatcccacccatctgtaccatccagcaagtcacagaatgtaaac
cttttgaatgaagatcttgaggaaatggatagtcaggaaatagaggggacgattgaacca
atggatcactcttga
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integrated database retrieval system
