Chiloscyllium plagiosum (whitespotted bambooshark): 122549459
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Entry
122549459 CDS
T08871
Symbol
chd7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpla03036
]
122549459 (chd7)
Chromosome and associated proteins [BR:
cpla03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
122549459 (chd7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
CHDCT2
DEAD
Chromo_MIT1
HTH_CHD1_Hrp3
HDA2-3
MUN
Motif
Other DBs
NCBI-GeneID:
122549459
NCBI-ProteinID:
XP_043545247
LinkDB
All DBs
Position
4:complement(135843763..136200384)
Genome browser
AA seq
2981 aa
AA seq
DB search
MADPGMLSLFGDDGNIFSEGLEGLGECGFSENPVNALGQQLPMDQGFGSMQSPLHHPPPT
QTQTKLAHYDHFGPFEQQKIHLVDQPNRMIGNTPGNGMASPHSQYHNPTVPPVPHSGAQM
GVYPTMQNERCGQQFVDSGSMWGPRAVQVPDQTRPAFQQQQQPQPPPPGQGHAQHMQQMG
NYLTRSDYSLQQHNQPQQQRVNQFTQGQEALSQGNPFMGTSGPGHLAHMPQQTPNIGPSL
RHTPTQQYHPHPPPPNSLHGDSIAHSPRFSPNPSQQASSRQQNLNFNSRSQAVPSQSVSS
SGQYSQYPYSSINQGLVNSNTGINQNLGLNSNPSVNQSIPRYPNTVGFPGGTSQGLMHQQ
TIHPGGPLNQINAQTMHPTQSQGTYASPPPMSPMKAMSNPAGTPPPQVRPGSAGMQLEVG
SYSNMPLPQQSHQSPGTMGLGQRSIGPRSMQTQYMSPSVPRDIGSLPRPVGALGPSGNHA
DQMMQERLMSGQQHPNQPFQPQLPTCPSVKQHSAVHHQTSPTSHQHQPWVQSQHSSPKAT
LQQVPAQHQPLSSTQSDMTQISGQNSQLASGEERQKSLDQQRMQEKANRIVAEAIAKAKA
RGEQNIPKVIDQIVISGTAMDGSTDEKKKKKKKPKEKKDPKEPKEAKEKKPKPTATKMKS
NKNASNKKSIPESTVGKKKGKRKHESSPENSDMDKTPPPSPPEEDELGVQKRRSSRQVKR
KRYTEDLEFKISDDDDAGKDSPLSTSQSEQDSTAGPVTEKILSMRVVKKTTESGEEVEVE
ELFVKYKNYSYLHCQWTTVEQLAKDKRIHQKIKRFKAKQAQMNKFLTEVEDEPFNPDYVE
VDRILDVSHSTDKDSGEPITHYLVKWCSLPYEESTWELKPDTDQVKIEEFHQLQSMKPRT
EYTERPLPEFWTKLEHSRDYKNGNQLREYQLEGVNWLLFNWYNSQNCILADEMGLGKTIQ
SITFLYEMFLKGIHGPFLIIAPLSTITNWEREFHTWTAMNVTVYHGSQASRQMIQAYEMY
FRDAEGQIIQGAYKFHAIITTFEMILTDCPELRNIAWRCVIIDEAHRLKNRNCKLLEGLK
LMDLEHKVLLTGTPLQNTVEELFSLLNFLEPSRFPSEINFLQEFGDLKTEEQVQKLQAIL
KPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILERNFTFLSKGAGQTNVPNLL
NTMMELRKCCNHPYLINGAEEKILEEFKETHNPDTPDFQLQAMIQAAGKLVLIDKLLPKL
KAGGHKVLIFSQMVRCLDILEDYLIQRRHLYERIDGRVRGNLRQAAIDRFSKPDSDRFVF
LLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYER
EMFDKASLKLGLDKAVLQSMSGRENSANGVQQLSKKEIEDLLRKGAYGALMDEEDEGSKF
CEEDIDQILLRRTHTITIESEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAELDI
DAINGRNNLVIDTPRIRKQTRHYNAIKEDELMEFSDLESESEEKTGKPLRRQQDRSHGYP
RTECFRVEKNLLVYGWGRWSDILSHGRFKRQLTEHDVETICRTILVYCLNHYRGDEKIKG
FIWDLITPTEDGQTRALQNHSGLSAPVPRGRKGKKVKSQSTLPMMKNADWLVNCNPDILL
HDDGYKKHLKHHCNKVLLRVRMLYYLKQEVIGDVAEKIFDGADASDLDIWIPEIDHAELP
TDWWDRESDKCLLIGVFKHGYEKYNSIRADPLFCFLERVGMPDAKAMAAEQRGTDVLADV
GDGADFDREDEDPEYKPGRIPFKDEMDEFENSPLDDKEECMDAENTGKQLDQDDESDKLY
WPSTSILTTRLRRLITAYQRSYKREQMKLEALNKSDRRRRRPRDEVRAREAERSAAISEK
RQRWTRREEADFYRVVSTFGVVFDPTKKQFDWNQFRAFARLDKKSDDSLEKYFSCFVAMC
RKVCRMPPNPGEELDASIFIEPITEERASRTLYRIELLRKVREQVLLHAQLDQRLKLCQP
SMDLPEWWECGKHDKDLLIGAAKHGVSRTDYHILNDSELSFLEAHKNFAQNKGASQRSST
PFQNQPGACLSQMPSVVTSTPVQEEKSTEQTDNDHSKAEGGLKCPTTPPPQEDQSTVPLK
EDGKVNCDENLHVDSECQDPLGPLSVKIEHDTEKPLIIASGLLPDPEDKELRPKLQFEKG
SEEDDDDEDDDDDDKSEESSQPEAGTATQSKQFDEESNASLSTARDETRDGFLMEDSEPT
VAQLLHERTYSFSFWPKDRVMINRLDNICEAVVKGKWPINRRQPFDFHGMINYTPTSVES
PLPRRSFTELSMVGQGSFSACEDIAGSPQVSRDDALNLSVPRQRRRRRKKIEIEAERAAR
RRNLMEMVAQLRESQAASDSGQERAVDLSKASREAKSSTSVSNLAVNSKYVLPNASVPVS
DAYKAHIEMLQAGLSRAPTGLMINGSLVDGEMPIKRRRGRRKNVEGLDLLFMNNKRTSLS
ADDAELTKAFDESVQSASQPRNIPSPGQLDPEVHIPVINLEDGTRLVGEEAPKNKDLVEW
LKVHPAYTVDMPSYVPKSGEVLLTPFQKPKQKRHRCRNPNKLDVNTLTGDERVPVVNKRN
GKKMGGAMAPPMKDLPRWLEENPEFAVAPDWADVVKQSGFLPESMFDRVLTGPVVREEGA
SRRGRRPKSEIAKAAAAAAAASASGINPLLMNSLFAGMDLASLQNLQNLQNLQLAGLMGF
PSSLATTATGGDAKNPASLLPLMLPGMAGLPNMFGLGSLLSNPLTATPGTSATSGPSETE
SGISSKTENDKENDKENEDKEINSAESAVDSNNASSSSFTAPSNTGLSNNPLAFNPFLLS
TMAPGLFYPSMFLPPGLGMTLSGFSHNTLAGLQSTISSNDDKEDKTDGKTEDNSVIEGEA
NSDDSDPMGSPSKAADSSLVEDELAQATGLDSVEGDDDDED
NT seq
8946 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcctggtatgctgagtttgtttggtgatgatgggaacattttcagtgaaggg
cttgaaggtcttggagaatgtggtttttcagaaaatccagtgaatgctcttgggcagcaa
ttacccatggatcaaggatttggctccatgcagtctcctctccatcatcccccaccaact
cagactcaaactaagctggctcattatgatcattttggtccatttgaacagcaaaaaata
catctggtagatcagcctaaccgaatgattggcaatacacccgggaatggtatggcatca
ccccactctcaataccacaaccccacggttccaccagtccctcacagtggtgctcagatg
ggtgtgtaccctactatgcagaatgaaaggtgtggacagcagtttgtagacagtggctcc
atgtggggcccacgtgctgttcaggtgccagatcagacccgacctgccttccagcaacag
caacaaccacagcccccacccccagggcaagggcacgctcaacatatgcaacagatgggg
aattacctaacacgtagtgattattcattgcagcagcacaaccagcctcagcagcagagg
gtgaaccaattcactcagggtcaagaggccctcagtcaaggaaatcctttcatgggaact
tcaggaccaggccacttagctcacatgcctcagcaaacccccaacattggcccttcttta
cgtcacactccaacccagcagtaccatccccacccccctccccccaattctctccatgga
gattccattgctcacagtcctagattttccccaaacccttctcaacaagccagtagcaga
caacaaaacttaaattttaattcacgtagccaggcggtaccatcacaatctgtgagtagc
tcagggcagtattcacaatatccttatagtagcattaatcagggattagttaacagtaat
acagggatcaatcaaaacctaggccttaatagtaacccatctgtgaaccagtcaataccc
cgctatccaaatactgtgggattcccaggtggcacaagccaaggactaatgcaccagcag
actatacatccaggtggcccacttaaccaaattaatgcacaaactatgcaccccacacag
tctcagggaacttatgcttctccaccaccaatgtcaccgatgaaagctatgagtaaccca
gcaggcacccctccaccacaggttaggcctggcagtgctggaatgcagttggaggttgga
agctattcaaacatgcccctgcctcaacagtcacaccagtccccaggtaccatgggtctt
ggacagaggagcattggtcccagaagcatgcagacacaatacatgagcccttctgtacca
agggatattggcagccttccaagaccagttggtgcacttggtcccagtggaaatcatgcc
gatcagatgatgcaggaacgtctaatgtctggccaacagcacccaaatcagccttttcaa
cctcagttgccaacttgtccatctgtgaaacagcactcagcagttcatcatcagacttct
ccgacatctcatcaacatcagccctgggtccagtcacagcattcttcacctaaggccaca
ttgcaacaagtgcctgcccaacaccagcctctttcaagtactcagtcagacatgacacag
attagtggacaaaattctcaattagcaagtggtgaagagcgacagaagtcactggatcag
cagcggatgcaagagaaagccaatcgcattgtggctgaagcaattgctaaggctaaagct
cgtggtgagcaaaatattcccaaggtgattgatcaaatagtgatctctggcactgcaatg
gatggctcaactgatgagaaaaagaaaaagaagaaaaaaccaaaagaaaagaaagacccc
aaggagcccaaagaagccaaggaaaaaaagcccaaaccaacagcaactaaaatgaaaagc
aacaagaatgcaagtaacaagaaaagtatcccggaatcaactgttggaaagaaaaaaggc
aaaaggaaacatgaatcttcccctgaaaattcagacatggacaaaaccccacctccatct
ccaccagaagaggatgaattaggagtgcagaaacgccgctctagccgacaagtgaaaaga
aagagatacacagaggatctagaatttaaaatatctgatgatgatgatgcaggaaaagat
tcaccattaagcacttcacaatctgaacaggactctacagctggtccagttactgagaag
atcttgagcatgcgagtggtgaagaaaactactgagtctggcgaagaggtggaagtagaa
gaattgtttgtcaaatacaaaaactattcttaccttcattgtcagtggaccacagtggag
cagctggcaaaggacaagagaattcaccagaagattaagcgttttaaagcaaagcaggca
caaatgaataaatttcttactgaggttgaagatgagccttttaatccagattatgtagaa
gtagatcggatacttgatgtttcacatagcactgataaagatagtggagagccaataacc
cattatttggtgaaatggtgttctcttccatatgaagaaagcacttgggaactgaaacca
gatacagaccaagttaagatagaggaatttcaccaactgcagtctatgaaaccaagaaca
gagtatacggaacgaccacttccagaattctggacgaaattggagcattcaagggactat
aaaaatggcaaccaactcagggaatatcaactggagggtgtaaattggctactctttaat
tggtacaacagccaaaactgtatattggccgacgaaatggggttaggaaagactattcaa
tctattacatttctttatgaaatgttcttgaagggaattcatggccccttcctgataatt
gcacctctttccacaatcactaattgggaaagggagttccacacttggacagcaatgaat
gtgaccgtgtaccatggcagccaggctagccgccaaatgattcaggcatatgagatgtac
ttcagggatgctgagggtcagatcattcagggagcatacaagttccatgccatcatcact
acatttgaaatgattttaactgattgcccagaattacgcaatattgcatggcgttgtgtg
ataattgatgaagcccacagactgaagaaccgaaactgcaaacttttagaaggactaaag
ctaatggatctggaacataaggtactgctgactggaacaccattacagaatactgtagaa
gagcttttcagtttgttaaatttcttggaaccctctcgattcccctcagagatcaacttt
ttgcaagagtttggtgatctgaaaactgaggaacaggtgcaaaaacttcaggctattctg
aaaccaatgatgttgagacgcttgaaggaagatgtagaaaaaaatctggctccaaaagaa
gaaactataattgaagtagaactcaccaacattcaaaagaaatattaccgtgctatcttg
gagagaaactttaccttcctctctaagggagctggtcaaaccaacgtgcccaatcttctg
aacactatgatggaactgagaaagtgctgtaatcatccatacctaattaatggtgccgaa
gagaagatattggaggagtttaaagagacacacaatcctgatacaccagattttcagctt
caggctatgatccaagctgctggcaagctagtgctgattgacaagttgctgccaaaactc
aaggctggtggccacaaggtgctgatattttcccagatggtgcgctgtttggatattctt
gaggactacctcattcagcgaaggcatctgtatgagcgtattgatggccgtgtgagggga
aatcttcgacaggcagcgatagatcgtttctctaaacccgattcagatcgctttgttttt
ctgttgtgcacccgtgcagggggcttggggattaacctcactgctgcagacacttgtatc
atctttgattctgattggaatccacaaaatgacctccaggctcaggctcgatgtcacagg
attgggcaaagcaaagccgtgaaagtatatagattaataaccagaaactcttatgaaaga
gagatgtttgataaggcaagtctgaaacttggattagacaaagctgttctgcagtctatg
agtggaagagaaaacagtgccaatggggttcagcagctttcaaagaaggagattgaggat
ctccttagaaaaggagcatatggtgcactgatggatgaagaggatgaagggtcaaaattc
tgtgaggaagatattgaccagattctcttaagacgtactcacacaattactatagagtct
gaaggaaaaggttctacttttgcgaaggcaagctttgtagcttctgggaatagaacagac
atttcactcgatgatcctaacttttggcaaaagtgggcgaaaaaagctgaattggatatc
gatgcaataaatggaaggaacaatttggtgattgatacaccaagaataagaaaacagaca
agacactacaatgctattaaagaagatgaactaatggaattttcagatttagaaagcgag
tctgaagaaaagactgggaaacccctccgtagacagcaagaccggtctcatggctaccct
aggactgaatgttttagagtggaaaagaacctgttggtgtatggttggggccgatggagt
gatatactgtcacatgggcgttttaaacgacagttgacagaacatgatgtggagaccatc
tgtcgcactatccttgtatactgcttgaaccattacagaggagatgaaaagatcaaaggt
tttatctgggatctaattactcctactgaggatggacagacgcgagctctgcaaaatcac
tctggtttgtctgcaccagtgcctagaggaaggaaaggaaagaaagttaaaagtcagtcc
actttaccaatgatgaaaaatgcagattggctagtaaactgcaaccctgatatcttgctg
catgatgatggctacaagaaacatctgaaacaccattgcaacaaagtcctgctgcgggta
cggatgctgtattatttgaagcaggaagtgataggagatgtagcagaaaagatatttgat
ggtgcagatgcaagtgatttagacatctggatcccagaaattgaccatgctgagcttcct
acggattggtgggacagggaatctgataaatgccttctcattggagtgttcaagcatgga
tatgaaaagtacaattctataagggcagatcctttattctgcttcctggagcgagtggga
atgcctgacgcaaaggctatggctgcagagcagaggggaacagatgtactggcagatgtt
ggtgatggtgctgattttgacagagaagatgaagatccagaatacaaaccagggagaatt
ccatttaaagatgaaatggatgaatttgagaattctccactcgatgacaaggaagaatgt
atggatgctgagaacacaggcaaacaacttgaccaagatgatgaatcagacaaactgtac
tggcctagcacctctattctcacaacacgtctgcgccgccttattacagcctatcaacgg
agctacaagagagaacagatgaaattagaagcgctgaataaaagtgatcgtcgtagacgc
cggccaagagacgaagtgagggctcgagaggcagagagaagtgcagctatatctgagaaa
cgtcaaagatggaccaggagagaagaagccgacttctatcgtgttgtgtcaacctttggt
gtagtttttgatcccacaaagaagcaatttgactggaaccagttccgtgcctttgctaga
ctggataaaaagtctgacgacagtttggaaaaatacttcagttgttttgtggctatgtgc
agaaaagtgtgccgtatgcctcccaatccaggtgaagagcttgatgccagcattttcatc
gagccaattacagaagaacgtgcttctagaactttgtatcgaatagaacttctccggaaa
gttcgagagcaggttttgcttcatgctcagctcgatcaacgactcaagctgtgccagcca
agcatggatctgcctgaatggtgggaatgcggcaaacatgacaaagacttattgatcggt
gctgcaaagcatggagtcagtcggacagactaccatattctaaatgactctgagctttct
ttccttgaggctcataaaaactttgctcaaaacaaaggagctagccagcggagtagtacg
ccttttcaaaaccaaccaggtgcctgtctgagccaaatgccttctgttgtcacatccaca
ccagttcaggaagaaaaaagtacagaacaaactgacaatgatcatagcaaagctgaaggt
gggctaaaatgtcctacaaccccaccacctcaagaagatcagagcacagtccctcttaag
gaagatgggaaagttaattgtgatgagaacttacatgttgattcagaatgtcaagacccc
ttgggaccattgtctgtgaagattgaacatgatactgaaaaacctttaatcatagccagt
ggattgcttcctgaccctgaagataaggaactgagacctaaattacaatttgagaaaggg
tcagaagaagatgacgatgacgaggatgatgacgatgatgataaatcggaagaatcgtcc
caacctgaagctggcactgctacccaaagcaaacaatttgatgaagaaagtaacgcctct
ctaagcactgcccgggatgaaactcgtgatggcttcctcatggaagatagtgaacccaca
gtagctcagcttcttcatgaaagaacatattccttttccttctggccaaaggatcgtgta
atgattaatcgcttggacaatatttgtgaggcagtggtcaagggaaagtggcctataaat
aggcgtcaaccatttgattttcatggtatgatcaactacacgcccacgtcagtggaaagc
cctctgccaaggaggagtttcactgaactctccatggtaggtcaagggagcttcagtgcc
tgtgaagatatagctggttctcctcaggtatcaagggatgatgcattgaatctgtcagtt
ccaaggcaacgtaggagacggcgtaagaagattgaaatagaagctgagcgagctgcgagg
agaagaaacctaatggagatggtagctcagcttcgcgagtctcaagcagcctcggatagt
ggacaggagagagctgtggacttatcaaaagcctccagagaggccaaaagttctacctca
gtcagtaaccttgctgttaattccaagtatgttttgccgaatgcctctgtgccagtatct
gatgcctataaagcccacattgaaatgctgcaagctggcctttcacgagcaccaactgga
cttatgataaatggttcattagttgatggggaaatgccaataaaaaggagaagaggaaga
aggaaaaatgttgagggactcgatcttctatttatgaataacaaacggacatcattaagt
gctgatgatgcggaactgaccaaagcttttgatgagagcgtgcagtcagcatcacaacca
agaaacattccatctcctggtcaattggacccagaggtgcacatccctgttattaattta
gaagatgggaccagactggtgggagaagaagcacctaagaataaggatttggtggaatgg
ctgaaagttcatccagcttacactgtagacatgcctagttatgtaccaaagagtggtgag
gtgctgttgaccccatttcaaaaacctaaacagaaaaggcatcgctgtagaaatcctaac
aaactggatgtgaacactttgacaggagatgaaagagtgcctgttgttaataaaagaaat
gggaaaaagatgggtggtgccatggccccaccaatgaaggatctaccaaggtggcttgaa
gaaaatcctgagtttgctgttgcacctgactgggctgatgttgtcaagcagtctggtttt
ctaccagagtccatgtttgatcgtgttctcactggcccagttgttcgagaggaaggagca
agtcgaagagggaggcgacctaaaagtgagattgccaaagctgctgcagctgctgctgct
gcttcagcctcaggaataaacccactactgatgaacagtctctttgctggtatggatcta
gcaagcctgcagaatttacagaacctgcagaatcttcagctagctggattgatgggcttc
ccgtcaagtcttgctacaacagctacaggaggagatgcaaaaaaccctgcttccttacta
ccactgatgcttccaggcatggcagggctacccaatatgtttggactgggaagcttgtta
agtaaccccttgactgctacgcctggtacttcagcaacatcgggtccaagcgaaacagaa
agtggcatttcctctaaaacagaaaatgataaagaaaatgataaggaaaatgaagataag
gaaataaacagtgctgaatctgcagttgattctaataatgcaagttccagttctttcaca
gctccttcaaacactggactatccaacaaccctcttgctttcaacccattcttactttcc
actatggctcctggattattctacccatctatgtttcttcctcctggtctgggcatgact
ttgtctggtttttctcataatacactggctggactacagagcacaataagctcaaatgat
gataaggaggataagacagatggaaaaactgaggacaacagtgttattgaaggcgaagcc
aattcagatgacagtgatcctatgggaagcccaagtaaagcagcagattcttctcttgtg
gaagatgagttggcacaggcgacagggttggactcagttgagggagatgatgatgatgag
gattaa
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integrated database retrieval system
