Chiloscyllium plagiosum (whitespotted bambooshark): 122549488
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Entry
122549488 CDS
T08871
Name
(RefSeq) arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1-like
KO
K12488
Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122549488
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpla04131
]
122549488
Membrane trafficking [BR:
cpla04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
122549488
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
BAR_3
Ank_2
PH
BAR
SH3_9
Ank
SH3_2
SH3_1
ArfGap
Ank_4
Ank_3
Ank_5
Motif
Other DBs
NCBI-GeneID:
122549488
NCBI-ProteinID:
XP_043545283
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Position
4:84346884..84710350
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AA seq
1256 aa
AA seq
DB search
MRSSASRISTFSSRDSLWNRMPDQISVSEFIAETTEDYNSPTTSSFTTKLLNCRNTASLL
EETLDLDKNALQKVKKSAKSINTSGQEHVQNEENYAQALDKFGSNFLSRDNPDLGTAFVK
FSTLTKELSTLLKNLLQNLSHNVIFTLDSLLKGDLKDVKGDLKKPFDKAWKDYETKFTKI
EKEKREHAKQHGMIRTEITGAEIAEEMEKERRVFQLQMCEYLIKVNEIKTKKGVDLLQNL
IKYYHAQCNFFQDGLKTADKLKQYIEKLAADLYNIKQTQDEEKKQLCTLRDMLKSSLQLE
QKESRRDSQSRQSGYSMHQLQGNKEYGSEKKGYLMKKSDGLRKVWQRRKCTVKNGYLTIS
HATTNRQPARLNLLTCQVKPAADEKKCFDLISHNRTYHFQADDEQECLVWISVLTNSKEE
ALNMAFRGEQSSGENSIEDLTKAIIEDVQRMPGNDVCCDCGAPGLWLFFPVIPVEEPNKP
RLAATAPSAAISNEAVGSSFIRDGQALQFTVSLEAKNVITGFLLPFRINEINKLCCFQLA
KNVGNISFNEILEANLPQPSPKPIPHSDMTARKEYIHAKYVDHKFAKRLCTSSLAKMNQL
LDSVKSRDLLALIQVYAEGVELMESLSDLGQEPGETVLHLAVRTADRTSLHLVDFLVQNS
GNLDKPTAKGNTAVHYCCVFDKVECLKLLLRGKPSLNLVNQSGETALDIARRLQRPQCEE
LISQAALGKVNPHVHVEYEWQLRQEEIDESDDDLDVKTSPVKKERSPRPQSCCHSSSLSP
QDKLMIPGLGIAREKQRLSYGAFSNQIYGGGTDSPTSPATDAPPLPPRNPSKAPHGPVPP
SVLPVGPQVTTGSSTLSKKRPPPPPPGHKRTLSDPPSPLPHGPQNKGLIPWGTDSGPPQS
NRTGNKFEGLSQQSSTGTGTTKTALGPRVLPKLPQKVSLRKIDSIHHSSVDKSNPDTFQK
PHPGDLTQKSHVEDPSQKPHPGDLPQKPHPGDLPQKPHPGDLPQKPHPGDLPQKPHPGDV
PQKPHPGDLPQKPHPGDLPQKPHPGDLPQKPHPGDVPQKPHPGDLPQKPHPGDLPQKPHP
GDLPQKPHPGDLPQKPHPGDLPQKPHPGDLPQKPKDLPPKPQPGEIPQKPHIGEVIQKSQ
PVEMSQKPQVQEISPKPQTRDILQKQPSEDANGTPPSLPETPVPLPRKINTAKNKIRRVK
TIYDCQADNDDELTFIEGEVIVVTGEEDQEWWIGYIEGQPDRSGVFPVSFVHILSD
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcttccgcctccagaatatcaacgttctcctccagggattcattatggaaccga
atgcccgatcaaatctcagtgtcggagtttatagccgagacgacggaggattacaactcg
ccaaccacgtccagcttcaccaccaaactgcttaactgcagaaacacagcgtccttgctc
gaagagactttagatttggataaaaatgcactacaaaaggtaaagaaatcggcaaaatca
ataaacacttcaggtcaagaacatgtgcaaaatgaagaaaactatgcacaagcactagat
aaatttggtagtaattttttaagtcgcgataatcctgatcttggcacggcttttgttaag
ttttccactctcacaaaggaactttcaacattgctgaaaaacttgctgcagaatcttagt
cataatgtcatcttcactttggattcactattgaagggagatctgaaagacgtcaagggg
gacctgaagaaaccttttgacaaagcatggaaggattatgaaacaaaatttactaaaatt
gaaaaagagaaacgggaacatgcaaagcagcatgggatgattcgaactgaaattacagga
gctgaaatagcagaagaaatggaaaaggagcgacgggtctttcagctccagatgtgtgag
tatctcattaaagtgaatgaaatcaagacaaaaaagggtgtggatttgctccaaaatctc
atcaaatattaccatgcacaatgcaatttttttcaggatggcttaaaaacagcagataag
ctgaaacagtacattgagaaacttgctgctgatttatacaatatcaagcaaacacaggat
gaagaaaagaagcagctgtgtacactccgtgatatgctcaaatcctcactgcaacttgaa
cagaaagaatctaggagagattcccaaagtagacaatctggatacagtatgcaccagctt
caaggcaataaggaatatggcagcgagaagaagggatatctcatgaaaaaaagtgatggt
cttcgaaaagtttggcagagaagaaagtgcacagtcaagaatggctacttgacaatatcc
catgcaactaccaacagacaaccagcaagactgaatctcctcacttgccaggtgaaaccc
gctgctgacgagaagaaatgttttgacttgatatcacacaacagaacctatcacttccaa
gcagacgatgaacaggaatgtctagtatggatatcagtattaactaacagtaaagaggag
gcattaaacatggcattcagaggagagcaaagcagtggagagaacagcatagaggaccta
accaaagccatcattgaagatgtgcagcggatgcctggcaatgatgtctgttgtgattgt
ggagctccaggtctttggttatttttcccagtgattcctgttgaagaaccaaataaaccc
cggctggcagccactgctcccagtgctgctattagtaatgaagcagttggcagctcattc
attagggatgggcaagccctacaattcaccgtctcccttgaagccaagaatgtcataaca
ggatttctgctgccattccgaataaatgaaataaataaattatgttgcttccagctggcc
aagaatgtaggaaatatcagtttcaatgaaattctagaagccaatctaccacaaccatca
ccaaagccaattccacatagtgacatgactgcacgtaaagaatacatacatgcaaaatat
gtagatcataaatttgccaaaaggttgtgcacctcttccttagctaaaatgaatcagtta
ttggattctgtgaagtccagggatttacttgcactaattcaagtctatgcagagggagtt
gaactaatggagtcactatcagatcttggacaggagccaggggaaacagtccttcaccta
gctgttcgaactgctgaccgaacctctctccacctggttgactttcttgtacagaatagt
ggcaatctggacaagcctactgcaaaaggaaacacagctgtacattactgctgcgtgttc
gataaagtggaatgtttaaaattgcttcttcggggcaaaccaagtttaaatctagtaaac
cagagtggagaaacagccctagatatagcgagaagattgcagcgtccacagtgtgaagaa
ttgatcagtcaagctgctttaggaaaagttaatcctcatgttcatgtagaatatgagtgg
caattacggcaagaagaaattgatgaaagtgatgatgacttggatgtaaagacaagtcct
gtaaaaaaagagcgttctccaaggccacagagctgctgccactcttctagtctctcccca
caagataaacttatgattcctggacttggcatagcacgggaaaaacagcgactgtcttat
ggggcgtttagtaatcaaatatatggaggtggaacggattctccaacatcaccagccact
gatgcccctcctcttcctcctaggaatccaagcaaagctccacatggcccagtccctcct
tcagtccttcctgtaggtccccaggtcacaaccggcagctccactttatcaaagaagaga
ccaccgcccccaccccctggacacaaacgaaccttatctgacccaccaagcccgctacct
catggtccccagaataaaggtctgattccttggggtacagattctggtcccccacagtca
aatcgaacaggaaataagtttgaggggttgtctcaacaatcaagtactggaactggaacc
acaaaaactgccttaggtccacgagtgcttccaaaactacctcaaaaagtgtccttgaga
aaaatcgatagtatccatcacagttcagtagataaatcaaatccagacacttttcagaag
ccacatccaggagacctgacccagaaatcacatgtggaagatccctcccagaagccgcat
ccaggggacctgccccagaagccgcatccgggggacctgccccagaagccgcatccgggg
gacctgccccagaagccgcatccgggagacctgccccagaagccgcatccgggagacgtg
cctcagaagccgcatccgggagacctgccccagaagccgcatccgggagacctgccccag
aagccgcatccgggagacctgccccagaagccgcatccgggagacgtgcctcagaagccg
catccgggagacctgccccagaagccgcatccgggagacctgccccagaagccgcatccg
ggggacctgccccagaagccgcatccgggggacctgccccagaagccgcatccaggggac
ttaccccagaagccgcatccgggggacctgcctcaaaaacccaaagatctgccaccaaaa
ccacagccaggagaaatccctcaaaaaccccatatcggagaagtcatccaaaagtcccag
cctgtggagatgtcccaaaagccacaggttcaggagatttctccaaagccacagacaagg
gacatactgcagaaacagccatctgaagatgcaaatggtacacctcccagtttacctgaa
acccctgtacccctaccacggaagataaatacagcaaagaacaaaatccgcagggtaaaa
accatatatgactgccaagctgacaatgacgatgaacttacctttattgagggagaagtg
attgtcgtaactggtgaagaggaccaggagtggtggattggctatattgaggggcaacct
gacagaagtggtgtctttccagtatccttcgtgcacattttatctgattaa
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