Chiloscyllium plagiosum (whitespotted bambooshark): 122549653
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Entry
122549653 CDS
T08871
Symbol
nr1d2b
Name
(RefSeq) nuclear receptor subfamily 1 group D member 2b isoform X1
KO
K08531
nuclear receptor subfamily 1 group D member 2
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpla03000
]
122549653 (nr1d2b)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cpla03310
]
122549653 (nr1d2b)
Transcription factors [BR:
cpla03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
122549653 (nr1d2b)
Nuclear receptors [BR:
cpla03310
]
1. Thyroid hormone like
1D. Rev-Erb
122549653 (nr1d2b)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
122549653
NCBI-ProteinID:
XP_043545378
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Position
5:610488..635615
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AA seq
581 aa
AA seq
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MTVIKANYDLGSTKARDFVPTLSKTQAGGVIAYISSSSSSCSPVSYHSDSSENSLQSVSS
SVPSSPNSFVSDNHINSNDMLADNCTLKLGSSSNIQLACSTKGDGSNANPLSKCTSGITK
INGMILLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNR
CQQCRFKKCLAVGMSRDAVRFGRIPKREKQRMLIEMQSAMKKMMNNQLNGYAQTEGSQDE
IASSQLQHKQLQNIEDDVIGTVAKAHKETFYCTQEKMGKMLEAEKLQNRKSTQKNSDDNW
IIDQSTNSINGSHCFHNANQHKISNTNKITNHVFCPNGVSDRFISRHYHTVLNEYTQNAI
AEDGFSQNNAMFDHSCTTERRMHLVCPMSMSPYVNPNKSEQEIWEEFSMSFTPAVREVVE
FAKRIPGFKDLSQHDQVSLLKAGTFEVLMVRFAALFDVHERTVTFLSGKSYGMEELQLLG
AGDLLMSMFEFSEKLGALQLSEEEMSLFTAVVLVSADRSGIENINSVEQLQETLIRALRT
LIMKNHPNESSIFTKLLLKLPDLRSLNNMHSEELLAFKIYP
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgactgtgataaaggcaaactatgatttgggatcaaccaaagcccgtgactttgtacca
actctctcaaaaactcaggcaggtggtgtcattgcatatataagttcatcaagttccagt
tgtagtcctgtctcttaccacagtgacagttcggagaacagcctccagtcagtctcgtct
tctgttccatcgtcacctaacagttttgtgtctgataaccacattaactccaatgacatg
cttgctgataactgtacattgaaactaggaagttccagtaacattcagcttgcatgttca
actaaaggggatgggtcaaacgcaaaccctttgagcaaatgtaccagcggcattactaaa
attaatgggatgatccttctgtgtaaagtctgtggagatgtggcatctggattccattat
ggtgtgcatgcatgtgaaggttgcaagggatttttccgaaggagcattcagcagaatatc
caatacaagaaatgtctgaaaaatgaaaactgttccataatgaggatgaataggaaccgg
tgtcagcagtgtcgctttaagaagtgtttagctgtaggcatgtcccgagatgctgttcga
tttgggcgcattcctaaacgtgagaagcagagaatgttgattgaaatgcaaagtgcaatg
aagaagatgatgaataatcagctgaacggctacgcacagactgaaggatcacaagatgaa
attgcttcttcacaactgcaacacaaacaacttcaaaacattgaagatgatgtaattggt
acagtggccaaagcccataaggaaacattctactgtactcaagaaaaaatgggcaaaatg
ctggaagctgagaagctccagaacagaaagagtactcagaaaaatagtgatgataattgg
ataattgatcagtctacaaatagcatcaatggaagccactgttttcacaatgcaaaccag
cacaaaatctctaacacaaataagattactaaccatgtattttgcccaaatggtgtgtca
gatagattcataagtaggcattatcatactgttttgaatgaatatactcaaaatgcaatt
gcagaagatggattttctcaaaacaacgctatgtttgaccattcttgtaccacggaaagg
agaatgcatctggtgtgcccgatgagtatgtcgccttatgtaaatcccaataaatcagaa
caggaaatctgggaagaattctccatgagctttacacctgcagttagagaagtggtagaa
tttgcaaaacgtattccaggattcaaagatctatcacaacatgaccaagttagcttgctt
aaagctggaacatttgaggtattaatggtacgctttgctgctttatttgatgtacatgag
cgcacggtcacatttctcagcggaaaaagttacggcatggaagagttgcagttattggga
gcaggtgatttgttgatgtccatgtttgagtttagtgagaagcttggtgccctacagctg
agtgaagaggaaatgagcctgtttacagctgttgtcctggtttctgctgatcgttcagga
atagaaaacattaactcagttgagcaattgcaagaaactctaattcgagcactcagaacc
ttaattatgaaaaatcatccaaatgaatcctccatctttacaaagctcctattgaaatta
cctgacctgcgttctcttaacaatatgcattccgaagaattgttggcctttaaaatatat
ccttaa
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