Chiloscyllium plagiosum (whitespotted bambooshark): 122549731
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Entry
122549731 CDS
T08871
Symbol
irx2a
Name
(RefSeq) iroquois-class homeodomain protein IRX-2a isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpla03000
]
122549731 (irx2a)
Transcription factors [BR:
cpla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
122549731 (irx2a)
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
122549731
NCBI-ProteinID:
XP_043545577
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All DBs
Position
5:16303489..16312309
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AA seq
460 aa
AA seq
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MSYPQGYLYQPAGSLALYSCPAYSASALTAPRSDELGRASSGSAFSPYAGSAAFTAPSTG
FTNPLQYSTDPATGFPSYMGSPYDAHTTGMAGTLSYHPYGNAAYPYQLNDPAYRKNATRD
ATATLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPRN
KSEDEEEEESGDSERNKEGSLKKNHDQNETSAEDEGISLHVDTLTESSCSPECEGDKVSR
VEGSICESGSESKEKCDDNCIDDDDAGGGDDDDDDDGSDEERELSHKTMNSSPLTRVDAA
LLHVQEDESSGSRSKHSLNSIITSVSQTPASKPKLWSLAEIATSDIKQQFGQICSPSPNS
SSSTSGSTYPATSILGRPIYYTSPFYTNYTNYANFNHLQSQGILRYSTNETVLNTASLHK
QSTDSLKNASPQLEQHFRATNYDSKKDPSDVCTVGVQPYL
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatcctcagggttatctgtaccagccggcaggttcgctggctctttactcgtgc
ccggcgtacagtgcttccgctctgaccgccccgaggagcgacgagctgggcagagcctcg
tccggctcggcgttcagtccctacgcgggctcggcagcattcacagccccctctacaggc
ttcactaatccgcttcagtactcaactgaccccgctactggattcccgtcctacatgggt
tccccgtacgatgctcacactacagggatggctggaaccctcagttaccacccctacggg
aacgcggcttatccttatcaactcaacgacccggcttatagaaagaacgccacccgagac
gccacggccactctcaaagcctggctacaagagcacaggaagaacccgtacccgaccaaa
ggggagaagatcatgctggccatcatcaccaagatgaccctgacccaggtctccacctgg
ttcgccaacgccaggaggagactcaagaaagagaacaaaatgacctgggctccgaggaac
aagagcgaggacgaagaggaggaggaatcgggagacagcgaaagaaacaaggaagggagc
ttgaagaaaaaccacgaccaaaacgaaacatcagctgaggatgaaggcattagtttgcac
gttgacacgctaaccgagagctcctgctccccagaatgcgaaggagacaaagtgagcagg
gtggagggcagcatttgtgaatctgggtccgaatcgaaggaaaaatgtgatgacaattgt
atcgatgatgacgacgccggtggtggtgatgatgatgatgatgatgatggcagcgatgag
gagcgggagctttctcacaaaactatgaattcctcgcctctcactcgggtggacgcggcg
ctgcttcacgttcaagaagacgagagctcggggagtagaagcaaacacagcctgaacagt
atcatcacctccgtttcacagactccagccagcaaacccaaactttggtctttagcggaa
atcgccacctcggatattaagcagcaattcggacagatttgttctccgtcgccgaactcc
tcttcgtcgacctctggctctacctacccggccacctcaatcctgggtaggcccatttac
tacacttcacccttttatactaactatacgaactacgccaactttaaccatctgcaaagc
caaggcatcttgcgatacagcaccaacgagactgtcttaaacactgcctccttgcacaaa
caaagcactgactctctgaaaaatgccagtccccagctcgagcaacacttcagggccaca
aattacgactccaaaaaagaccccagtgatgtctgcacagtaggagtgcaaccatatcta
tag
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