Chiloscyllium plagiosum (whitespotted bambooshark): 122549751
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Entry
122549751 CDS
T08871
Symbol
pex1
Name
(RefSeq) peroxisome biogenesis factor 1 isoform X1
KO
K13338
peroxin-1
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
122549751 (pex1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpla04131
]
122549751 (pex1)
Membrane trafficking [BR:
cpla04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
122549751 (pex1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-2N
PEX-1N
AAA_lid_3
AAA_16
nSTAND3
AAA_14
RuvB_N
AAA_22
AAA_5
TIP49
AAA_33
AAA_18
RNA_helicase
ABC_tran
NACHT
AAA_19
Sigma54_activat
NPHP3_N
TsaE
AAA_28
Bac_DnaA
AAA_7
DUF815
AAA_2
AAA_24
Mg_chelatase
AAA_25
NB-ARC
Sigma54_activ_2
APS_kinase
ATPase
ATPase_2
AAA_30
AAA_29
Viral_helicase1
ATP-synt_ab
NTPase_1
AAA_10
KTI12
cobW
Motif
Other DBs
NCBI-GeneID:
122549751
NCBI-ProteinID:
XP_043545637
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Position
5:23321294..23430166
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AA seq
1280 aa
AA seq
DB search
MLAAGTACVQLRLSNIKDCFLHLASQRASQLHLEECQAIELSWGLQQTAFLSWVGRRYAG
FEEENIAEISRQLGIKLGLKDGEQVFLRPCAQVSSCQQVVVEPLSPSDWEILELHSTSLE
RYIMDQIRIVYPGGIFPIWIEKRTVIYLEVGSLMPAGAYGRLEPFTELVVSPKLQQIEGA
SLNTTFVGYSSLSKEPNLGSNKINEENFEKPRIVHSSKKLYDQHEMNENHTRETRDSFSG
SIMSNIWRLIKNKFSVNSHVAEQLPSKVVCKHTFLNTVSTSFEIDSIFRVCKRFPSNLEM
HGSTLWNRRQPDTVHIFSWQHDVLPLNNSDTQIIYGKLTKLLSYREQKEISKQNLLSEKK
KIDENDTKARVNRAKAESCIIKIICHGCEHLKCTKSNDFHSGKVWIPDSLRKNLNVEASA
VVRINSLKLNPSLPSRIQLQPLQMLPQEIKIDDVKSSFLSWLNVVSSEDFPFFAALSNFV
QIPIAEREIEFMLVVEQLEAKSNTGGSVCFFLYPDLIKDIYIEVVMHPTTTDTSVVQTVD
DIDQILSFYKMSCLGGVHELAASTLERISLSLLGHPLSLQVASVAKGLQSGAVLLTGVKG
SGKTTLAKAICREASDKLEAHVEVIDCKALRGKRAENIRKKWEDAFAEAAWRQPSVVLMD
DLDHIIGAASTPEHEHSAEAILSKQLSQTLKYLFALAVSQGSLIALIATSISEYTLHPSL
ICAEGSRIFQCINGISLPNQDQRVQILTSVIQNKTIIPLKTLKNIDLQKLAKATEGFVVR
DFVMLMERAVHSHLLTSKSNKEQELCLTTLDFHQALKGFTPTSLRNTNLHKPKDLGWDKV
GGLQEVKQILLDTIQLSVKYPQLFAKLPIRQQSGILLYGAPGTGKTLLASVVARESGVNF
ISIKGPELLSKYIGASEQAIRDVFSKAQAAKPCILFFDEFDSIAPRRGHDNTGVTDRVVN
QLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKSVYCPPPDQEARFEILKALSQ
SLSLADDVDLQQIATMTEYFTGADLKALLCNAQLDAVHSTISSTVFRDAGSGSDSDMSLS
SMIFLNHSNGSDESTGDGERWLEQSPVYLDTSEILPDDPCPNIWRLYFGSSYESELGTGT
SSEQNSQCLSGPNSMTLDHTITSVRDTISSHAPAFMTSLQEGYQELSQEQVELLRFELNV
IKANTRIKKTEGPSHNQSGPVSSSQFICQSHLLTALTNTRPSISQQEWCNFVELYDGFQK
SRGTKKQSGVIKAGQRVTLA
NT seq
3843 nt
NT seq
+upstream
nt +downstream
nt
atgctggctgccgggaccgcgtgcgtgcagctgagactcagcaacatcaaagactgcttc
ctgcatctggcctcacagcgagcgtcgcagctccacctggaggagtgtcaagccattgaa
ttgtcatggggtcttcagcagacagcattcttaagttgggtcggacgaagatatgctggt
tttgaagaagaaaacattgcagagattagcagacaattgggaattaaacttgggctcaaa
gatggagaacaggtatttctcaggccttgtgcacaagtctcatcctgtcaacaagttgtc
gtggaaccgctttcacctagtgactgggaaatactggagcttcatagtacatcacttgaa
agatatattatggatcagatcagaatagtttatccaggaggaatatttccaatatggatc
gagaaacgtactgtgatatatcttgaagttggttccctgatgcctgctggtgcatatgga
aggttagagcccttcactgaacttgttgtgtcacctaaattacagcaaattgaaggagct
tctctaaacactactttcgttggatacagttctttaagtaaagaacctaacttgggcagc
aacaaaattaatgaagaaaattttgagaaacctcggattgtacattcttccaagaagttg
tatgatcaacatgaaatgaatgaaaatcatacaagggaaactcgagactctttcagtgga
agcatcatgtcaaatatatggcgtttgattaaaaataaattctctgtaaattcacatgtt
gcggaacaacttccttccaaagttgtttgcaaacatacttttttaaacactgtttccaca
tcctttgaaatagactcaatattcagagtgtgtaaaagatttcctagtaatttagaaatg
catggctcaacgctatggaaccgaaggcagcctgatacagttcatatcttttcttggcaa
cacgacgtacttccgttgaacaacagtgatacgcagattatttatgggaaactgacaaaa
ctgttatcatatagagaacaaaaggaaatatccaagcaaaatctactatcggaaaagaaa
aaaattgacgaaaatgacacaaaagccagagttaaccgagcaaaagctgaatcttgcatt
attaaaataatctgtcatgggtgtgaacatttaaagtgtactaagtccaatgattttcat
agtggaaaagtttggattccagatagtttaagaaagaacttgaatgtggaagcatctgct
gtagtcaggataaattcgttaaaattgaatccttcccttccatccagaattcaattgcaa
cccttgcaaatgctgccacaggaaattaaaatagatgacgttaaatcctcctttctctcc
tggctcaatgttgtgagctctgaggatttcccattttttgcagcattatcgaattttgta
caaataccaattgccgaacgtgagatcgagtttatgctggttgtagaacaactagaagca
aagtcaaacaccggaggaagtgtatgtttcttcttgtatcctgatttgattaaagatatt
tacattgaggtggttatgcatcccacaactacagacaccagtgtggtacagacggtggat
gatattgaccagattctgtcattttacaaaatgagttgtttgggaggggttcatgagctt
gctgcgtcaactttagagcgcatctctctcagcctgttgggtcacccactttcattgcaa
gttgcttcagttgcaaaaggtctccaaagtggagcagttctgcttacaggagtaaagggc
agtgggaaaactactttagcaaaagccatttgcagagaggcatcagataaactggaagca
catgtggaagttattgactgtaaagccttgcgaggtaaaagggctgaaaatatccgtaag
aaatgggaagatgctttcgcagaggctgcatggagacaaccttctgttgttctaatggat
gacttggatcatattattggagctgcctctactccagaacatgaacacagtgctgaagct
attcttagcaaacagctttctcaaactttgaagtatttgtttgctctggcagtttcacaa
gggagtcttattgcattaatagccaccagcatttctgaatacactctgcatccctctctc
atttgtgctgaaggatcccgcatatttcagtgcattaatggcatttcacttccaaaccag
gatcagcgagtacagatcttaacctctgtaattcaaaataaaaccattattccactgaag
acattaaaaaacattgatcttcaaaaactggctaaagcaactgaaggctttgtagtacga
gattttgtcatgctgatggaacgagccgtgcactctcatttattgactagtaagagcaac
aaagaacaagaactatgtttgacaacgttggatttccatcaggcactcaagggatttaca
cctacttctctaaggaacactaacctacacaaaccaaaagatttaggatgggataaagtg
ggagggctacaggaagtaaagcaaattcttctggacaccatacaattatctgtcaagtat
ccacagttgtttgctaaactgcctatacgacaacaatctggaatcctgttgtacggggca
ccaggaactggaaagacattattagcaagtgttgtcgccagagaaagtggagttaacttt
atcagtattaagggtcctgaactgctgagtaaatacattggtgcaagtgaacaggcaatt
cgtgatgttttcagcaaggcacaggctgctaaaccttgcattcttttctttgacgagttt
gattccattgcacctcgtcgtggtcatgacaacactggtgtaactgacagagttgtcaat
caactgctaacacaactggatggagttgaaggattacaaggagtttatgtgttggctgcc
acaagtcgtccagatttgattgatcctgctctgttacggccaggtcgtttagataaatct
gtttactgcccacctccagatcaggaagcacgctttgagatcttgaaagctttgagccag
tcattatccttggcagatgatgttgatttacagcaaatagcaactatgactgaatacttt
actggagctgacttgaaagctttactctgcaatgcccagctggatgcagttcatagcacc
atatcatcaaccgtattccgggatgctggttcaggttccgatagtgatatgagtctatcc
tcgatgatcttcttgaatcacagcaatggttctgatgagtccacaggggatggagaaaga
tggttggaacagtctccagtttatctggataccagtgaaatattacctgacgatccatgc
cctaacatctggcgcctttactttggtagttcttacgaatctgaacttggaactggaact
tcttcagagcagaactctcaatgtttgtcgggaccaaattcgatgactcttgatcacact
atcacatctgttcgggataccatatcttctcatgcccctgcatttatgacatcattgcaa
gaaggttaccaagaactttctcaagagcaagtggagcttctacggtttgagctaaatgta
attaaagcaaacacaaggataaagaaaacggagggtccttcccacaatcagtcaggaccc
gtaagctcttcacaatttatttgtcagtcccacctactaacagcattgacaaatacaaga
ccttctatcagtcagcaagaatggtgcaactttgtagaactgtatgatggttttcaaaaa
tctcgaggcactaagaagcagagtggagtcattaaggctggacagagagtcaccttggca
taa
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