Chiloscyllium plagiosum (whitespotted bambooshark): 122549985
Help
Entry
122549985 CDS
T08871
Symbol
itga8
Name
(RefSeq) integrin alpha-8 isoform X1
KO
K06584
integrin alpha 8
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04510
Focal adhesion
cpla04512
ECM-receptor interaction
cpla04514
Cell adhesion molecules
cpla04810
Regulation of actin cytoskeleton
cpla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122549985 (itga8)
04514 Cell adhesion molecules
122549985 (itga8)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122549985 (itga8)
09142 Cell motility
04820 Cytoskeleton in muscle cells
122549985 (itga8)
04810 Regulation of actin cytoskeleton
122549985 (itga8)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cpla04515
]
122549985 (itga8)
Cell adhesion molecules [BR:
cpla04515
]
Integrins
Integrin alpha subunits
122549985 (itga8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
ITGAX-like_Ig_3
DUF7728
Motif
Other DBs
NCBI-GeneID:
122549985
NCBI-ProteinID:
XP_043546257
LinkDB
All DBs
Position
5:71767439..71975072
Genome browser
AA seq
1050 aa
AA seq
DB search
MPLYRYRQRFGPRSRLFHLLSLLVPGCVAFNLEVSRPAVYSGPPGSYFGYSVDFYSPDQN
TVSVLVGAPKANTSQPGIVEGGAVYFCSWAAGGATCSQIPFDRSSNRSIRINGTREPIEF
KSNQWFGATVKSHKEKVVACAPLYHWRALKLTQEKDPVGTCYVAVQNFSVYAEYSPCRSD
QPDPEGQGFCQAGFSLDFTQNGYLVLGGPGSFYWQGQVITAGIFEILNGYDFRDMQRTVN
GERQTGVAPADYDDNYLGYSVAVGEFTGDSQQEFVAGIPRGAEAFGYVAIINATDMTFIL
NFTGEQMASYFGYTVAVSDINNDGLDDVLVGAPLFMDRESDGKLKEVGLVYLYLQEEEFL
FKDPQKLLGTEVFGRFGSAVAPLADVNQDGYYDIAVGVPFGGEDRRGKVLIYNGQSSGLN
SKPSQVLEGLWPSESMPPGFGFTLRGGSDIDRNEYPDLVVGAFGASKVALYRARPVVTVD
AQLLLNPSIINPANKSCQLLGSETLVSCFTVQVSATVSGRGIPDTVVLDASLQLDRLKQK
GGIERTLFLNSHRPQHTFHFVVGKSERSKYQEFIVYLTDEKEFRDKLTPIIVSLNYSLSE
SHPSEDLKPIINYYSETFLQKQAHILLDCGKDNVCIPALKLSAIPDRQQLIFGDENPLTL
IINGRNEGEGAYEAELNVIIPSEADYIGVIRNNEALSKLSCAYKVDNSTQMVVCDLGNPM
TAGTNLSVGLRFSVQRLETADASISFDLQIKSSNKDNSSSNLVQVQINVSAVAQVYVRGV
SHPEQIFLPITDWKIKERPKKEEHIGPVVQHVYELHNSGPSAIRAGVMEVDWPSHYRDEY
LLYILQIKTNGPLHCYTNTTINPLQLETVNRSALGEHISLRNPTTTTHLITRREVRLPQP
LKYDYARILNCSNIDCTKIVCHVGQLGRGQSAVLNVWSRIWVETFLKRRNNHYSLQSLVS
FVVKEMAYKIQPEELPSTNTVIRTSVIWATPDASLAIPLWVIILAVLVGLLVLAILILVM
WKFGFFDRARPPQDDMTDREQLHPEKTTDA
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgcctctttatcgttaccgccagaggttcggtccccggagtcgcctcttccacttactg
tcgctgttggtccctggctgtgtcgccttcaacctggaggtgtcccggccggcggtttac
agcggacccccgggcagctacttcggatactcggtggatttctactcgcctgatcaaaac
acggtcagtgtccttgttggagctccgaaagccaacaccagccaacccgggatagtggag
ggaggagcggtgtatttctgcagctgggcagcaggaggtgccacttgcagccagattccc
ttcgacagaagcagtaacagaagcattagaattaatggcaccagggaacctattgaattt
aaatccaatcagtggtttggggcaacggtcaaatcgcataaagaaaaggttgtggcttgt
gcccctctatatcattggcgagctctgaagttgactcaagaaaaagacccagttggcact
tgttatgtggcagttcagaatttcagtgtttatgcagaatattctccatgtcgttctgat
caaccagatcctgaaggtcagggtttttgtcaagcaggatttagccttgattttacccag
aatgggtacctggtgcttggaggacctggcagtttttactggcaaggtcaggtgatcact
gctggtatctttgaaattttaaatggatatgacttcagagatatgcaacggacagtaaat
ggagaacgacagactggagtggctcctgctgattatgatgataattacttaggatactca
gttgctgtgggggaattcacaggagactctcaacaagaatttgttgctggaattccaaga
ggtgctgaagcatttggatatgttgccatcataaatgcaacagatatgacattcatcttg
aattttactggtgaacagatggcttcctattttggatacaccgtggctgtctctgatata
aacaatgatggattggatgacgtgttagtcggtgctccgcttttcatggaccgtgagtct
gatggaaagttgaaggaagttgggctggtttatctttacttgcaggaggaagagttcctt
ttcaaggaccctcagaaactattgggaacggaagtgtttggaagatttggaagtgcagtc
gcacctttggcagatgtgaatcaagatggatattatgatatcgcagtgggtgtacctttt
gggggtgaagataggagaggcaaagttctgatttacaatggtcagagcagtgggttaaat
tccaagccatcgcaggtcctggaaggtttgtggccctcagagtccatgcctcctggattt
ggctttaccttaagaggaggctcagacatagacaggaatgaatatccagacttggtggtt
ggtgcctttggagctagtaaagttgctctttacagggctaggcctgttgttactgtggat
gcacaactactcctgaacccttcaatcataaacccagcaaataaaagctgccagcttttg
ggatccgagaccttggtgtcatgtttcactgtgcaagtctctgcaactgtgtcaggccgt
ggtattccagatacagtagttctggatgcgagccttcaactagacagactgaagcagaaa
ggaggaattgagagaacgctattccttaattctcatcgaccacagcacacattccatttt
gtcgttggaaaatcagaacgttccaaatatcaggaattcattgtttaccttacagatgaa
aaggaatttagagataaattaacaccaattattgttagtttaaattatagccttagtgaa
tcacatccttcagaggatcttaaaccaataatcaactactacagtgaaacatttcttcaa
aaacaggcacacattctgctagactgtggaaaggacaatgtttgcatcccagcacttaaa
ctttcagctatccctgatagacagcagttaatatttggcgatgagaatcctctcacttta
atcataaatgggaggaatgaaggagaaggagcatatgaagcagaactcaatgtcattata
ccatctgaagcagattacattggcgttatacgcaacaatgaggcactgagcaagctaagc
tgtgcctataaagtggacaattcaactcaaatggttgtctgtgatctgggaaatcctatg
acagctggaaccaatctgtctgtggggctccgtttttctgttcagcgcttggaaacagca
gatgccagcatcagctttgacctgcagatcaaaagttcaaataaggataattcaagcagc
aacttggtccaagtgcagatcaatgtcagtgcagttgctcaggtctatgttcggggggtg
tctcatcctgagcaaatctttctacccatcactgactggaagattaaagaaagacctaag
aaagaggagcacattggaccagtggttcagcatgtttatgaactccacaacagcggacca
agtgcaatcagggctggggtcatggaagtggattggcctagtcactatcgagatgaatat
ctactgtacattttgcagataaaaacaaatgggcctttacactgctacacgaatactaca
attaatccactacagttagagactgttaaccggtcagctcttggagaacatatcagcttg
cggaaccccaccacgactacacatctcatcacaagacgagaagtgcggttaccacagcct
ctaaaatatgattatgcaagaatactgaattgtagcaacattgattgtacaaaaatagtt
tgccatgttggtcaactgggaagggggcagagcgcagtgctgaatgtttggtctcgaatc
tgggttgaaaccttcttaaagagaagaaacaaccattactctctacagtctctggtgtca
tttgtagtaaaggaaatggcatacaaaatccagccagaggaattacccagcacaaatact
gtgataaggacttcggtgatttgggccacacctgatgcttcacttgcaatccccctgtgg
gtcataattctagctgtactggttggtttgctagttctggctattttgatcttagtcatg
tggaagtttggtttctttgatcgagcccgcccacctcaggatgacatgacggatcgagaa
caacttcacccagaaaagactacggatgcctga
DBGET
integrated database retrieval system
