Chiloscyllium plagiosum (whitespotted bambooshark): 122550009
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Entry
122550009 CDS
T08871
Name
(RefSeq) glial fibrillary acidic protein-like isoform X1
KO
K07606
vimentin
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
122550009
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpla03019
]
122550009
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cpla04812
]
122550009
04147 Exosome [BR:
cpla04147
]
122550009
Messenger RNA biogenesis [BR:
cpla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
122550009
Cytoskeleton proteins [BR:
cpla04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
122550009
Exosome [BR:
cpla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122550009
Exosomal proteins of other cancer cells
122550009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
FKBP15
DUF7491
DUF885
Baculo_PEP_C
DUF948
DUF1664
CALCOCO1
KIF21A_4th
TPR_MLP1_2
Uso1_p115_C
Motif
Other DBs
NCBI-GeneID:
122550009
NCBI-ProteinID:
XP_043546319
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All DBs
Position
5:74882467..74905837
Genome browser
AA seq
454 aa
AA seq
DB search
MNYSSNSPSSFRRLTIRSKSGSQSAPVRRSFTRTVTYSSPTTASGWLNKSAPSKMPEEGD
QLDFSLLDAISDEFKVTRTDEKEKLIDLNNRFVSYIEKVRSMEQQNKILQAELQELKGKG
SSKIGSVFEQELKKLRQEVDQISKEKARIEVERDNLLDDVHKVKAKLRNEIQQREDAENT
LSDFREDVDEATLACVDLQRKVDALQDEIAFLKKLHEEEIHDLESQGQNQHTRIEMDVAR
PDLSSALQEARSQFDKLAARNITETEEWYKSKVSGLTQNIARSNEALRQAKQEASDYRRE
AQALKCEVEALKSSKDFLERQKNEMEDQFNKETAKFQETILQLEDEIQNMTEQMTHRLSE
YQDLLKVKMALDAEITTYRKLLESEENRYSMTAPPSPLHLQGVELERSKPPEIQSPKRTL
SMKTIEMKDGEVLSETSQEFELQISDAHTEVNQD
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgaattattcgtcaaattctccatcatcgttccgcagattgactatacggtcaaaatca
ggttcacaatcagcaccagttcgtcgttctttcactagaacagtgacctactctagccca
actactgcttcaggttggttaaacaagagtgctccaagcaaaatgcctgaagaaggtgat
caattagacttttccctgttggatgctataagtgatgaattcaaggtcacccgcactgat
gagaaagaaaagctgattgacctgaacaaccgctttgtcagctacatcgagaaggtgagg
tccatggagcaacagaacaagattcttcaggctgaactgcaggaactgaagggtaagggc
agttccaaaattgggtccgtctttgaacaggagcttaaaaaactacgccaagaagtggat
cagatctctaaggagaaagccagaattgaagtggaaagagacaatttgttggatgatgtc
cacaaagtcaaggccaagttgagaaatgaaatacagcaacgtgaggatgcagaaaacacc
ttgtcagatttccgagaggatgtggacgaagcaactctagcatgtgttgacctgcagcgt
aaagttgatgcattgcaggatgaaattgccttcttaaagaaacttcatgaagaagaaatc
catgacctggaatcacaagggcaaaatcaacacaccaggattgagatggatgtggctagg
cctgacctttcttcagcactacaagaagctcgttctcaattcgataaacttgccgctagg
aacattactgaaactgaggagtggtacaaatccaaggtttccggccttactcaaaatatt
gctcgcagcaacgaagcccttcgccaggcaaagcaagaagcaagtgattaccgcagggag
gcccaggcactcaagtgcgaagttgaagctcttaaaagctcaaaagattttcttgagcgc
cagaagaatgaaatggaggatcagtttaacaaggaaacagccaaattccaagaaacaatc
cttcaacttgaagatgaaattcaaaatatgactgaacagatgacccatcgcttatctgaa
tatcaagatctgctgaaagttaaaatggcactagatgctgagatcacaacttacaggaag
ttattggagagtgaggaaaacaggtattcgatgactgcccctcctagtcctttgcatctg
caaggtgtagaacttgaacgaagcaaaccacctgaaattcaatcccctaaaaggacactg
tccatgaaaacaattgaaatgaaagatggagaggtactcagtgagacctcacaagagttt
gaactgcagatatcagatgcacatactgaagtgaatcaagattaa
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