Chiloscyllium plagiosum (whitespotted bambooshark): 122550010
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Entry
122550010 CDS
T08871
Name
(RefSeq) type III intermediate filament-like
KO
K07606
vimentin
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
122550010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpla03019
]
122550010
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cpla04812
]
122550010
04147 Exosome [BR:
cpla04147
]
122550010
Messenger RNA biogenesis [BR:
cpla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
122550010
Cytoskeleton proteins [BR:
cpla04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
122550010
Exosome [BR:
cpla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122550010
Exosomal proteins of other cancer cells
122550010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
TolA_bind_tri
YwqH-like
GAS
DUF1664
TPR_MLP1_2
SPAM
ADIP
DUF4515
T2SSF
Fez1
HALZ
Motif
Other DBs
NCBI-GeneID:
122550010
NCBI-ProteinID:
XP_043546321
LinkDB
All DBs
Position
5:74921996..74934594
Genome browser
AA seq
449 aa
AA seq
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MTTKTSIYRKMFVEKPIRTTSSIHSYSSVKPGRSIVPSYSRVSYSGPIKAQSTRRLRSSA
PSAAMSNSLNFSLVDAMNSEFKTNRSNEKAEMIELNDRLASFLDKVRGLEHQNKTLLVEL
EQLKGKPRSRIGDMYELELRQLRQQIDQINNEKSRVEVERDNLVDDLQKLREKLQDEIIQ
REEAENNLAAFRQDVDDACLARLDLERKVESLQEEIMFLKKLHEEEISELQAQIQESQVK
VEMDMVRPDLTAALHEVRSEFDKLAAKNIAETEAWYKSKLADVNDSAVRNNDALRTMKQE
NGDYRRQIQTLTCDIDALKGTNESLERQMQEMEERYALEASNAQETIANLEDEIGNLKDE
MARHLQEYQELLTVKMALDIEIATYRKLLEGEENRISMPLQSFSSLSLADAMYEQQPTDV
QMSRKNVVIKTIESRGGDIISETTQRIED
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccaaaacaagtatctaccgcaagatgttcgtagaaaaacccatccggaccact
tcgagcattcactcgtactcgtctgtgaaaccggggcgaagcatcgttccttcttactcc
agggtcagctactcgggaccgatcaaggcacagagcacacggcgtttgaggagcagcgct
ccctcagcggccatgagcaacagcctcaacttctctctggtggatgccatgaactcggag
ttcaagaccaatcgcagcaatgagaaagccgagatgattgagctgaatgaccgtctggcc
agcttcctggacaaggtgagagggctcgaacaccagaacaagacgttgctggtcgagctc
gaacagctgaaagggaaaccccggtccaggattggggacatgtacgaactggagctgagg
caactgcgccagcagattgaccaaatcaacaacgagaagtccagagtcgaggtggaaaga
gacaacctggtcgacgatctccaaaagctgagggaaaagttgcaagatgaaattattcag
cgggaggaggctgaaaacaatctggcagctttcagacaggatgtggatgatgcctgtctg
gcacgcttagatctggaacgtaaagttgaatcactgcaggaagaaattatgttcttaaag
aaactacatgaagaggaaattagtgagttacaagctcaaatccaagaatcacaggtcaag
gttgagatggatatggtcagacctgaccttactgcagcactccatgaagttcgttctgag
tttgataaacttgctgctaagaacattgctgaaactgaggcatggtacaagtccaagtta
gcggatgtgaatgattctgctgttcgcaacaatgatgctcttcgcacaatgaaacaagag
aatggtgattaccgcagacaaatccagacactgacctgcgatattgatgcacttaaggga
acaaatgaatctcttgagcgccagatgcaggaaatggaagaacgttatgctttggaggca
agtaatgcccaggaaaccattgccaaccttgaagatgagattggtaacttgaaggatgag
atggcccgtcatttgcaagaataccaggagctactgactgtaaagatggctctcgatatt
gagattgcaacctacaggaaattgctggagggtgaggaaaacaggatttctatgcctctg
caatcatttagttctctgagtcttgctgatgccatgtatgagcaacagccaactgatgtt
caaatgtcaaggaagaatgttgtaatcaaaacaattgagagcagaggcggagatataatc
agcgaaactacccagagaattgaagactga
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