Chiloscyllium plagiosum (whitespotted bambooshark): 122550055
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Entry
122550055 CDS
T08871
Name
(RefSeq) patched domain-containing protein 3-like isoform X1
KO
K24682
patched domain-containing protein
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cpla04990
]
122550055
Domain-containing proteins not elsewhere classified [BR:
cpla04990
]
Other domain-containing proteins
Patched domain-containing proteins
122550055
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
MMPL
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
122550055
NCBI-ProteinID:
XP_043546447
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All DBs
Position
5:complement(84911553..84948173)
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AA seq
932 aa
AA seq
DB search
MTQFRANCVEKPLRRAFRKLGVLVSKYSWCFLTFPLILSVVLGSGFSSLRRLESNDIEEQ
FTPIYGPAKSEREFIKKHFPTTDSEFFSGQRLYTEGVFASFIAVSKDDNILTAAAFQEIL
SLDADVKQLSINNKEGVTYSYSSLCTRMANSCFGNEILNIINHSLATNTRISYPMMNKTF
IGLAVGGVDQDQNYINKAKAIKLSYYLQEDNDDMKTLSLLWLKNFVQVFPNKLKDQESIM
VSYFTSISRQEEFEGTSKKIIPLFSVTYFLSIFFSIVSCMRLDCVRNKFWVAALGVISAG
LAVLSGFGLLLYCGIKFAINTANAPFLILGIGIDDMFVMLASWQTTDVTDKIEDRLADTY
AEAAISITITTLTDVLAFYIGIMTPFRSVQSFCVYTGTTVLFCFIYNITFFGAVLALNGR
REASNRHWLTFRKVKSDQEPEDSKCYSMCCVGGAYNSETGAELEHPVYFFFQKYYGPWLT
NIWTKALVVVLYIGYLAVSIYGCINIKEGIDLRNLAFDGSYVIKFYDDQSAFFSKYGPRV
MVAVTEPVDYWNPTVQDDIETCMGRLENNSYLDPELSESWLRVYIAITKQMLIDIQEKNA
FLGNLSILFHIVPVFEHDIRFSESKQRIDAARFFIQTINVNTPVAEKNMLIELRKLAQEC
QIPLLVYHPAFIYFDQYLVIVSNTIQNVVVAAAAMLIIALLLIPNPICSIWVTFSTASVL
VAVAGFMTFWGVNLDSISMINLVICIGFSVDFSAHISYAFVSSDRETANERSIDALYSLG
YPIIQGALSTILGVVVLAAAASYIFRTFFKIMFLVITFGAVHGLILLPVFLTFSASRWKS
NSAKSGKITSHVYSNEAFKEKMTSDLNTFRGFVGEQDRDCPCFSIPNVLNKSCASHGSFP
CNRMTCNTCPFSSSVLTVPGPKHPFQMTQQFS
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgactcagttcagggcaaattgcgtcgagaaacctctccgccgggctttccgtaaactt
ggagtcctcgtgagtaaatattcctggtgcttcctcacgtttcctctgatactttctgtt
gttctgggttcgggcttttcttctttacggagacttgaaagcaatgacatagaagagcaa
tttacgcccatatatggaccagcaaaatctgagagagagttcattaaaaaacattttcca
accactgattctgaattcttctctggtcagagactttacacagagggggtgtttgcttct
ttcattgctgtatcgaaagatgacaatatcttgacagctgctgcatttcaagagattctg
tcacttgatgccgacgtaaagcagctcagcatcaacaataaagaaggtgtcacgtacagc
tattcttctctttgtacacggatggcaaactcgtgctttggaaatgaaattttaaatatt
ataaatcacagcctagcaaccaacacgaggatttcttaccctatgatgaataagactttt
attggtttggctgttggaggtgttgaccaggatcaaaattatattaataaagccaaagct
attaaactaagttattatttacaagaagataatgatgacatgaaaaccctcagtttgctg
tggctgaagaattttgttcaggtttttccgaacaaactgaaagatcaggagagtattatg
gtttcctatttcacatcaatatcaagacaagaagagtttgaagggacttctaagaaaatt
attcctttgttctctgtcacgtatttcctttcaatattcttttctattgtatcatgtatg
aggttggactgtgtgaggaataagttctgggttgctgctttgggagttatatcggctgga
ttagctgtactgtcaggatttggactgctattatactgtgggattaaatttgctatcaat
actgccaatgcaccttttctgattctaggtattggtatagatgatatgtttgtcatgctc
gccagttggcaaacgaccgacgtcaccgataagattgaagatcgccttgctgatacatat
gctgaagcagccatctctattacaatcaccactctgactgatgttttggccttttatatt
ggcattatgacaccttttcgatctgtgcagtcattctgtgtttacacaggcacaacagtt
ctgttttgcttcatttataacattacattttttggagctgttcttgcattgaacgggaga
agagaagccagcaacaggcattggctgacattcagaaaagtcaaaagtgatcaggaacca
gaagactctaaatgctattcaatgtgttgtgtgggtggagcttataatagtgagactggt
gccgaactagaacatccagtttatttcttctttcagaaatattatggtccctggctcaca
aacatttggaccaaggcacttgtggttgtcctatacattggttacttggctgtcagtatt
tatggttgtataaatatcaaagagggaattgatctcagaaatctggcctttgatggttct
tatgtgattaaattctatgatgatcaaagtgcttttttctcaaaatatggaccacgtgtt
atggttgctgtcactgaacccgtggattattggaatcccactgttcaggatgacattgaa
acctgcatgggcagattggaaaacaactcgtatttagatcctgaattgtcagaatcctgg
cttcgtgtgtacattgccataactaaacagatgttaatagacattcaggaaaaaaatgca
ttcttgggaaatttatctatattgtttcacattgttcctgtatttgaacatgacattagg
ttttcagaaagtaagcaaagaattgatgctgctcgctttttcattcagaccattaatgtc
aatactccagtcgctgagaaaaacatgctgattgaattaagaaagctggcacaggaatgt
caaatccctttgctggtgtaccatcctgcatttatctattttgatcaatatcttgttatt
gtatccaacacaatacagaatgtagttgttgctgctgctgcaatgctgatcattgcgcta
ttgttaatacctaatccaatctgctctatatgggtaacattttctactgcatcagtttta
gtggctgtggctggttttatgacgttttggggtgtcaatttagattcgatatcaatgatt
aatctggtcatttgtattggtttttctgtggacttttcagctcacatttcatatgcattt
gtgtctagtgacagagaaactgcaaatgaacgaagtattgatgcattatacagccttgga
tatcccatcatccaaggggccctatcgaccatactgggtgtagttgtactggctgctgca
gcaagttacatatttaggacattttttaaaatcatgtttcttgtcataacgtttggagct
gttcatggccttatacttctgcctgtgttcctgacatttagtgcaagccgctggaagtca
aacagtgcaaaatcaggcaagataaccagccatgtctattccaatgaggcttttaaagaa
aagatgacaagtgacttaaatacatttagaggttttgtaggagagcaagatcgtgactgt
ccctgtttctccattccaaatgtcctcaacaagtcatgtgcttcccatggtagcttccct
tgcaatcgcatgacatgtaatacctgcccttttagctcctcagtcctcactgttccaggc
cccaaacatcctttccagatgacgcaacaattttcctaa
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