KEGG   Chiloscyllium plagiosum (whitespotted bambooshark): 122550082
Entry
122550082         CDS       T08871                                 
Name
(RefSeq) integrin beta-1-like isoform X1
  KO
K05719  integrin beta 1
Organism
cpla  Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03271  Virion - Rotavirus
cpla04145  Phagocytosis
cpla04510  Focal adhesion
cpla04512  ECM-receptor interaction
cpla04514  Cell adhesion molecule (CAM) interaction
cpla04517  IgSF CAM signaling
cpla04518  Integrin signaling
cpla04530  Tight junction
cpla04810  Regulation of actin cytoskeleton
cpla04820  Cytoskeleton in muscle cells
cpla05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:cpla00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03271 Virion - Rotavirus
    122550082
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    122550082
   04514 Cell adhesion molecule (CAM) interaction
    122550082
   04517 IgSF CAM signaling
    122550082
   04518 Integrin signaling
    122550082
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    122550082
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    122550082
   04530 Tight junction
    122550082
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    122550082
   04810 Regulation of actin cytoskeleton
    122550082
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    122550082
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cpla04131]
    122550082
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cpla04147]
    122550082
   04515 Cell adhesion molecules [BR:cpla04515]
    122550082
   04090 CD molecules [BR:cpla04090]
    122550082
Membrane trafficking [BR:cpla04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    122550082
Exosome [BR:cpla04147]
 Exosomal proteins
  Proteins found in most exosomes
   122550082
Cell adhesion molecules [BR:cpla04515]
 Integrins
  Integrin beta subunits
   122550082
CD molecules [BR:cpla04090]
 Proteins
  122550082
SSDB
Motif
Pfam: Integrin_beta Integrin_b_cyt Integrin_B_tail EGF_integrin I-EGF_1 EGF_2 vWA_SIBA-E
Other DBs
NCBI-GeneID: 122550082
NCBI-ProteinID: XP_043546544
LinkDB
Position
5:complement(89492885..89573603)
AA seq 803 aa
MRMTLKYIIYIGLICCCMWDGLAQSDLSECLKANAKSCGDCIQAGRNCGWCTKNKFLQQG
EPNSARCDDIESLKKRGCEIEDIENPKGSQRVDANKELTGRTSGEKVELKDITQIRPQKL
TLKLRSGEPQTFPLYFKRAEDYPIDLYYLMDLSFSMKDDLENVKKLGTELQTEMQKITSD
FRIGFGSFVDKTVMPYISTTPAKRKNPCSSGEVCTSPFSYKNVLSLTNDGSKFNELVSNQ
TISGNLDSPEGGFDAIMQVAVCGERIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDG
NCHLDTQGLYTMSDHFDYPSIAHLVQKLGDNNIQPIFAVTEEFKGVYKALHDLIPKSEVG
VLSSNSSNVIKLILDAYHALSSEVILENSKLPEGVSIHYTAFCKNNTVHTGEEGRKCLGI
QIGDEVSFNISITAKKCPNNGEKATIQIKPLGFNEKVEIDLEFVCECDCHKKGIPNSPDC
HQGNGTFECGACRCNKGRIGRFCECSTDQVNTEDMDASCRKDNASQICSDNGDCVCGECL
CKKRENPNEIISGKYCECDNFNCDRSNGLICGGNGVCKCRVCECNPNYSGNACDCSLDNS
TCISENGQMCNGRGTCECGRCKCTDSKFQGAACEMCPTCPGVCTEHRDCVQCKAFNKGRK
KENCDECEFDVILVKEQGDLPPPSQDSPILHCKEKDEDDCWFYFSYSVNDQNVPEVYVTE
NPECPQAPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTQE
NPIYKSPINKFKNPNYGRKVASL
NT seq 2412 nt   +upstreamnt  +downstreamnt
atgcggatgactttgaagtatatcatttatattggactgatttgctgctgcatgtgggat
ggacttgcccaatcagatcttagtgagtgtttgaaagccaatgccaaatcatgtggggac
tgtatacaagctggtagaaattgtggatggtgcaccaaaaataaattcttgcagcaggga
gaaccaaattctgcacggtgcgatgacatagaatcactaaaaaagagagggtgtgaaatt
gaagatattgaaaatccaaaaggttcacaacgtgtagatgctaataaagaacttactgga
cgtacaagtggcgaaaaggtagagctgaaagacattacacagatcagaccgcagaagcta
actctgaaattacgatcaggagagccacaaacctttccattgtactttaagagagcagaa
gactatcccattgatctctactatcttatggacctctccttttctatgaaggatgattta
gaaaacgtaaagaagttaggaacagaattgcagactgaaatgcaaaagataacgtctgat
tttcgaattggatttggttcatttgtggataagactgtaatgccttacatcagcacaacc
ccagccaaaaggaagaatccttgctcaagtggtgaagtatgtactagtccattcagctac
aaaaatgtcctgtcattgaccaatgatggatcaaagttcaacgaacttgtaagcaaccag
actatttctgggaacctggactctccagaaggaggttttgatgccataatgcaggtggct
gtctgtggagaaagaattggctggcgcaatgtcactcgtttgttggtgttctctacagac
gcaggatttcactttgctggagatggtaaactaggtggtattgttttaccaaatgatggg
aattgccatcttgatacacaaggtctctacaccatgagtgaccattttgattatccatct
attgctcatttggtgcaaaaacttggtgacaataatattcaacctatttttgcagtcaca
gaagaattcaagggtgtgtacaaggcgctccatgatctcattccaaaatcggaagtgggg
gttctatcatcaaactctagtaatgtaatcaagctgatccttgatgcttatcatgctttg
tcatctgaggtaatccttgagaacagcaaattgccagaaggagtgtcaatacattataca
gccttttgtaaaaataatactgttcatacaggggaagaaggcaggaagtgtttaggcatt
caaattggtgatgaggtgagcttcaacataagtatcacagcaaaaaaatgcccaaataat
ggtgaaaaggcaactattcaaatcaaacctctgggatttaatgagaaagtagaaattgat
ctggagtttgtttgtgaatgtgattgccataagaagggaattcctaatagcccagattgt
caccagggtaatggaacatttgaatgtggagcttgcagatgtaacaaaggacggattggt
cgattttgtgagtgcagcactgatcaagtgaatactgaggatatggatgcttcctgcaga
aaggataatgcatctcaaatctgtagtgacaatggagattgtgtctgtggggaatgcctc
tgcaaaaagagggaaaatcctaatgaaatcatctcaggcaaatattgtgaatgtgataac
tttaattgtgatcgatccaatggattgatttgtggaggaaatggtgtctgtaagtgccgg
gtctgtgaatgcaaccccaactattctggcaatgcttgtgattgctccctggataattca
acatgcatttcggagaatggacagatgtgtaatgggagaggcacatgtgagtgtggccgc
tgcaaatgcactgattctaaattccaaggagctgcatgtgaaatgtgtccaacctgccct
ggagtatgtacagaacacagggattgtgttcaatgtaaagcctttaataaaggacgcaag
aaagaaaattgtgacgaatgtgagtttgatgtaatactggtgaaagagcaaggtgatttg
ccgccaccaagccaagattcaccaatccttcattgtaaggagaaggatgaagatgattgt
tggttctacttttcctattctgttaatgatcagaatgttccagaagtttatgttactgaa
aacccagagtgtccacaagcacctgacatcattccaattgtagctggtgtggttgctggt
attgtcttgataggtcttgccctgttgctgatatggaaattactgatgattattcatgac
agaagggagtttgcaaaatttgaaaaagagaaaatgaatgccaaatgggatacacaagaa
aatcctatttacaagagtcctataaacaaattcaagaatccaaattatgggcgtaaagtt
gcttctctctaa

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