Chiloscyllium plagiosum (whitespotted bambooshark): 122550085
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Entry
122550085 CDS
T08871
Name
(RefSeq) partitioning defective 3 homolog isoform X1
KO
K04237
partitioning defective protein 3
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04144
Endocytosis
cpla04517
IgSF CAM signaling
cpla04520
Adherens junction
cpla04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
122550085
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122550085
09144 Cellular community - eukaryotes
04520 Adherens junction
122550085
04530 Tight junction
122550085
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cpla01009
]
122550085
Protein phosphatases and associated proteins [BR:
cpla01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122550085
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Par3_HAL_N_term
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
122550085
NCBI-ProteinID:
XP_043546560
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All DBs
Position
5:complement(90261848..91105245)
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AA seq
1384 aa
AA seq
DB search
MKVTVCFARTRVVVPCGNGAITVHSLIQQAVTRYRRAIAKDPGYWVQVHRLEHSDGGILD
LDDILSDVADDKDRLVAIFEEQEPHHGGDGTSASSTGTQSPEIFGSEPAPNSLSAFQPYQ
ASSEIEVTPSVLRANMPLHVRRSSDPALIGLLSSVTGPNHNSAEPSRKNPTRWSTTPGFP
KPSQTSSSLDRKKKETTPRNPVNGQDNYRSLPRDAGHWSNQFQRDNARSSLSATHPMVDK
WLERQEQEEDGTEEESNRIEPVGRADSCLEHGQNFSLGDVLKLVEVSNDGGPLGIHVVPF
SSTVGRTLGLLVKRLEKGGKAEREKLFNENDCIVKINGGDLRNTRFEQAQHMFRQAMRSQ
IIWFHVVPAANKEQYEQVSFAEKNAYYSNRANIDTQPGDRKSAMNASFDETPQRLSRSSN
ETDQTVSYSHLPHNQNSVSKPPTGQNLTPQRLSSTPTTGFSTKKVGKKLNIQLKKGPEGL
GFSITSRDVPVGGSAPIYVKNILPKGAAIQDGRLKAGDRLLEVNGVDLTGKIQEEVVTLL
RNTKMGGTVSLLVLRQEETFLPRELVRRIPDKLEKKESSQMQAPSELKAEDDDLVLTPDG
TREFLTFEIPLNDTGSAGLGVSVKGNRSKENHADLGIFVKSIINGGAASKDGRLNVNDQL
IAVNSESLLGKTNQDAMETLRRSMSTEGNKRGMIQLIVARRITKHNELETPGSPSGPELP
IDAVMDDRERRISHSLYSGIEGLDESPTRNIGFNRLMGNYHMSPTVNMTQDDTVIIEDDR
PPGNLPRLPNQPSVDYHQEINSVTSGLWVKEPDKDKTDGVLSPDVDPAVAFQREGFGRQS
MSEKRTKQFGDATQLDFVKTRKSKSMDLVADETNLDSLAEQITTGSSTRDVGPSLGLKKS
SSLESLQTAVAEVTLNSDIPFHRPRPRIIRGRGCNESFRAAIDKSYDKPAEEEDDDEGME
TLEEDTEESSRSGRESVSTASDQPSLAGGHLTGTMEKQVNGSRSKEDRKKEKTGKEREKK
KDKEKEKEKDKEKSKVKKGMLKGLGDMFRFGKYRKEEKGGKLDRKGSNKGKVEETLPSED
ERTRMRQEQERIQAKHREIRERQARERDYADPQDLNRAYGSDDDPTYAGMSWCESSLNSG
HNLILNTRPQSAREEAQPMEAVYAQVNKSRNGNIPSVESNRLAPSNHDRIQKLRNEFQQA
KQEELEDRRRTYSFEQPWPSSGPYAQSGRHSVSVEVQLQRQRQEERESFQQAQRQYSSLP
RQSKKNSSSMTQEAWDKGYVPGDGFQSAKDNPRYSSYQGSRNGYLGHGVNARVLMETQEL
LRQEEQRQKDHQPTEGRNNYDSYKTDPSYSLPKGPYRQDVPPSPSQVARLSRLQMQDKAR
PFYP
NT seq
4155 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgaccgtctgcttcgcgaggaccagggtggttgttccttgtggaaatggggcc
atcacagtgcacagcctgatccaacaggcggtgactaggtaccgccgagccatcgccaag
gatccaggttattgggttcaagtgcatcgtttggagcatagtgatggcggtatcttggac
cttgatgacatcctgtctgatgttgctgatgataaggaccgacttgttgctatttttgaa
gagcaagagccacaccatggtggtgatggtacaagtgccagttcaactggtactcaaagc
ccagagatatttggcagtgagcctgcaccaaactccttgtctgcattccagccatatcaa
gcgtcaagtgagattgaggtcacgccatccgtcctccgagcaaacatgccacttcacgtg
agacggagcagtgatcctgcactgattggtcttttatcttctgtaacgggacctaaccat
aactcagcagagccatcacgcaaaaacccgacccgttggtccacaacacctggctttcca
aaaccaagccaaacatccagtagtcttgacagaaaaaagaaggaaacaactccaaggaat
ccagtgaatggacaggacaactacaggagtttaccgagagatgctggccattggtcgaac
cagtttcagcgagataatgcccgatcatctttaagtgccactcatcccatggtggacaaa
tggctggaaaggcaggaacaggaggaagatggaacagaagaggagagcaacaggatcgag
ccagttggacgtgctgattcttgccttgaacatggacagaatttttcgctcggtgatgtg
ctaaagctggttgaagtctccaatgatggagggcctttgggaatccatgtagtgcctttc
agttccacagttggaaggaccctggggttactggtgaaacgtctagagaaaggcggtaaa
gctgagcgggagaaactgtttaatgagaacgattgtattgtcaaaataaacggtggtgat
ttgcgaaatacacgctttgaacaagcacaacatatgtttcgccaagccatgcgttcacag
attatttggttccacgtggtccccgcagcaaacaaggagcaatacgaacaagtctctttt
gccgaaaaaaatgcgtattattccaatcgagccaatatagatactcagcccggtgatcga
aagagtgctatgaatgcaagctttgatgaaacaccacagagattatcaagatcaagcaat
gagactgatcagactgtttcctactcccatctacctcacaatcagaactcagtgtcaaaa
cctccaactggccagaatctaactccccaaagactgagttctacacccactacaggcttc
agcaccaaaaaagtagggaagaaactgaatatccaattgaagaaaggtcctgaaggtctt
ggatttagcataacatcacgggatgttcctgttggtggttcagcaccaatttatgtgaaa
aacattcttccaaaaggtgcagctatccaagatggcagactgaaggcaggagaccggctt
ctagaggttaatggtgtagatctaactggaaaaatacaagaggaagtggtgacactgctg
aggaacaccaagatgggtggcactgtcagtctgttggtcctccggcaggaagaaaccttc
ctccctcgggaactggtgcgtagaatacctgacaaactagagaaaaaagaatcaagtcag
atgcaggcaccaagcgaattgaaagcagaggatgatgacttggtgcttacacctgatggt
accagggagttcctgacatttgaaattcctctcaatgatactggatctgcaggcctcgga
gttagtgtcaaaggtaatagatcaaaagaaaaccatgctgacctgggcatatttgtgaaa
tccatcatcaatggaggagcagcatcgaaggatggtagacttaatgtgaatgaccagctt
atagcagtgaacagtgaatcattgttgggaaaaacaaaccaagatgccatggagacacta
cggagatccatgtccacagagggaaataagagaggaatgatccaattgattgttgccagg
aggataacaaaacacaatgagctcgagacacctggcagcccctctgggcctgagctgcct
attgatgctgtgatggacgacagagaacgaaggatttcacattcactttatagtggaatc
gagggattggatgagtcacccactaggaatattggttttaacagattgatgggtaactac
catatgtctccgacggtgaacatgacccaggatgacactgttattattgaagatgacaga
ccacctggcaatcttcctcgactacccaaccagccatctgtggattatcatcaagaaata
aattctgtaacttctggtctgtgggtgaaagaacctgataaagataaaaccgatggtgtt
ttaagtccagatgtcgatcctgccgttgccttccagcgagagggattcggacgtcagagc
atgtctgaaaaacgtaccaaacagtttggagatgccactcaactggattttgttaaaacg
cggaaatctaaaagcatggacttagtagctgatgagactaatcttgattccttggctgaa
cagataaccacaggctcctcgaccagggatgttggaccttcattaggactgaagaaatca
agctcgctagaaagcctgcagacagcagttgctgaagtaactttgaatagtgatattcct
ttccatcgcccacgaccacgaatcatcagagggcggggttgcaatgagagtttccgggct
gccattgacaagtcgtacgacaaacctgcagaagaagaggatgatgatgaagggatggaa
acattggaagaagataccgaggaaagttccagatcaggcagagaatctgtttcaacagcc
agtgatcagccatcactcgctggtggacatctgacagggacaatggagaaacaggtgaat
ggctccagaagcaaggaggacagaaagaaggagaagactggcaaagaaagagaaaaaaag
aaagacaaagagaaggagaaagaaaaagacaaagagaagagtaaagtcaagaaagggatg
ttgaaaggtcttggtgacatgttcaggtttggcaaataccgtaaagaggaaaaaggtggg
aagcttgatcgaaaagggtcaaacaagggcaaggtggaagaaactctcccatctgaggat
gagcgaacacgaatgagacaagaacaagagagaattcaggcaaaacaccgtgaaattcgg
gagcggcaggcccgggaacgagactatgcagatccacaagatttgaatagagcctatgga
tctgacgatgacccaacatatgctggcatgagttggtgtgaatcttctttaaacagcggg
cacaacctgattttaaatactagaccgcagagtgcaagagaagaagcacaaccaatggaa
gcggtgtatgctcaagtgaataaatcaagaaatggaaatattccatctgtggaaagtaac
agactcgctcccagtaaccacgatcggatacaaaagctaagaaatgagttccagcaagca
aaacaagaggagcttgaggatcggcggcgtacatacagttttgaacagccttggcccagc
tctggtccctacgctcaaagcggtcggcattcagtgtctgtagaggttcaactccagcga
cagagacaggaagaaagggaaagtttccagcaggcacagcgacagtacagctccttgcca
cggcaaagcaaaaagaattccagttccatgactcaggaagcatgggataaaggctatgtc
cctggtgatggtttccagagtgctaaggacaatcccagatactcaagttatcagggctct
cgaaatggctacctagggcatggcgtcaatgcacgggttttaatggaaacacaagaactg
cttcgtcaagaagaacaacgacagaaagatcatcagcctacagaagggcgtaacaattat
gactcgtacaaaactgatcccagctacagccttccgaaaggtccttacaggcaagatgtc
cctccgtccccttctcaggttgccaggctgtccagattacaaatgcaggacaaggcacgg
ccattctacccctga
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