Chiloscyllium plagiosum (whitespotted bambooshark): 122550109
Help
Entry
122550109 CDS
T08871
Symbol
ube3c
Name
(RefSeq) ubiquitin-protein ligase E3C
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122550109 (ube3c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpla04121
]
122550109 (ube3c)
Enzymes [BR:
cpla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
122550109 (ube3c)
Ubiquitin system [BR:
cpla04121
]
Ubiquitin ligases (E3)
HECT type E3
122550109 (ube3c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
Fin
Motif
Other DBs
NCBI-GeneID:
122550109
NCBI-ProteinID:
XP_043546639
LinkDB
All DBs
Position
5:complement(101354189..101531456)
Genome browser
AA seq
1091 aa
AA seq
DB search
MFSFEGDFKTRPKVSLGGASRKEEKASLLHRTQEERRKREEERRRQKNTVIIQSFLRGYR
DRKQQHMIQRSEFDDYVSFAQAGGNFSISDGHNLTVLIRKLLFFYKQNEDLDRLTWMCQN
LVKHSAQYVQQLADCNKDTCLYQIKCLLGLCCRLLKNCDNESLNITVPLRMIETFSSEKI
YMPIVQDANIVASLIEQILHYMIQKGYYKSLYMLINHRLPSSLEYSDVSRISHVPLAVTL
LENFLKPLHFQYASCPEGSRHQVFAALAKEFFTAPFTDQIYNFLVPALSARASFPYVSFL
SALLIPNMTSSVGLTFTRDMAPWLLYFVLAVGESQIGILSEDGMLVYLRMVQILLPQLPV
SLTGSNSREIGSDSENEEEEERKMITNNDDGRISISLITAECLKKLDTKQQTNALLNLVW
KESVSEDVFTMMASICHTLMVQHRMMVPKIRLLYSLAFNARFMRHLWNLITSVTTKMITG
SMVSLLQLISRGSPMSLEDSHRIIPLFYLFSSLFSHSLISVHDNEFFGEQTQGGVGQQPP
TMMPFTLKELVTLSRCLRDACLGIIHLAYPETKPEVREEYMVAFKSIGVRTNTEMQQRIE
AERKRWIQLFKVISNLVKMLKSRDTRRQFCPPDHWLSDQVNIRADKVTQLYVPSARHVWR
MRRMGRIGPLQSTLDVGQEPAQLSVSEERHLAILTELPFVVPFEERVKIFQRLIFADKQD
VQGEGPFLDGINVTIRRNYIYEDAYDKLSPENESDLRKRIRVHLLNAHGLDEAGIDGGGI
FREFLNELLKTGFNPNQGFFKTTNEGLLYPNPAAKMLVGDLFTRHYYFLGRMLGKALYEN
MLVELPFASFFLSKLLGTSADVDIHHLASLDPEMYKNLLFLKSYEGDVEELGLNFTVVNN
ELGEAQVVELKLGGKDIPVTSANRIAYIHLVADYRLNKQIRPHCLAFRQGVANVVNLEWL
RMFDQQELQVLISGAQIPIDLEDLKNFTNYSGGYSADHAVIKIFWIVVENFTNDEKRKLL
KFVTSCSRPPLLGFKELYPAFCIHNGGTDLERLPTASTCMNLLKLPEFYDENLMRSKLLY
AIESAAGFELS
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgttcagctttgaaggggatttcaaaacgcggcccaaggtatctcttggtggagcaagc
aggaaggaagaaaaagcttcactgctacatcgaacccaggaagaaaggcgaaagcgagag
gaagaaagaagacggcaaaagaacaccgttattattcagtccttcctaaggggatatagg
gacaggaaacaacaacatatgattcaacgaagtgaatttgatgattatgtctccttcgcc
caagcaggaggaaatttttctatcagtgatgggcataatttgactgttttaataagaaaa
ctcctatttttttacaaacaaaatgaagatttggatagattgacatggatgtgtcaaaat
ttggtgaagcatagtgctcaatatgtgcagcagttagctgattgtaacaaagacacatgt
ttgtatcaaataaaatgtttattgggtttgtgttgcaggttactgaagaactgtgacaat
gaaagtttgaacattactgtgcctttgaggatgattgagaccttttcctcagaaaaaata
tatatgcccattgtacaggatgccaatattgtagcatcattgattgaacaaatattgcac
tacatgattcagaaaggttactacaaatcactttacatgttaattaatcataggcttcca
tcaagtttagaatattctgatgtttcacgaatttcacatgtaccgcttgcagttacactc
ttggagaatttcctgaagccattgcactttcaatatgcctcctgcccagaagggtcaagg
catcaggtttttgctgcgttggcaaaagagtttttcactgcacccttcacagaccagatc
tacaacttccttgttccagcactgtctgcaagagcttcctttccgtatgtgtcttttttg
agtgcactgttaataccaaacatgacctcgtcagtaggactcacttttaccagggatatg
gcaccttggcttctgtactttgttcttgctgttggagaatcgcaaatagggattctgtct
gaggatggaatgcttgtgtacttaaggatggtgcagattcttttaccacagttacctgtt
tcattgactggttcaaatagcagagaaattggcagtgactctgaaaatgaagaggaggag
gagcgtaaaatgataaccaataacgacgatggtagaatttcaataagtttaattactgca
gaatgtctcaagaagttggacactaaacagcagactaatgccctgctcaatctggtatgg
aaggaatctgtgagtgaagatgttttcacaatgatggcgtctatttgtcataccctgatg
gtacagcacagaatgatggttccaaaaatcagacttctgtatagtttggctttcaacgca
agattcatgcgacatctttggaatttgatcacctctgtaacaacaaaaatgatcacaggg
tcgatggtatcattacttcaactgatctctcgaggatctccaatgtcacttgaggactca
catcggatcatacctctcttttacctcttcagctccctcttcagccattcccttatttca
gtacatgacaacgaattctttggagagcagactcaaggaggtgtgggtcagcagccacca
acaatgatgccattcactttaaaagagttagtgacgttatcccgttgccttcgggatgct
tgccttggaataattcatctggcatatccagaaaccaaaccagaggttcgggaggagtac
atggtggcatttaagagcattggtgtgcggaccaatactgaaatgcaacaacgaattgaa
gcggagagaaaaagatggattcagctttttaaggtgatctctaatttagtgaaaatgcta
aagtcaagggacacaagaaggcaattctgtcctcctgatcactggctttctgatcaagtt
aatattcgagcagataaggtcacacagctctatgtgccctcagctaggcatgtctggagg
atgcgccgaatgggaaggatagggccattgcaatctacattagatgttgggcaggagcca
gctcaattatcggtatctgaagaacgtcatcttgccattttaacagaactaccttttgtt
gttccgtttgaagaacgagttaagatctttcaaagattgatctttgccgacaaacaagat
gtgcaaggagaggggccgtttttagatggaattaatgtgacaattcggcgcaattatatc
tatgaagatgcatatgacaagctgtcaccagaaaatgaatctgacctgaggaaacgaata
cgtgttcacctattaaacgcacatggtttagatgaagctgggattgatggtggaggaata
ttcagagaatttctgaatgaactactcaagactgggtttaacccaaaccagggttttttt
aaaacaacaaacgaagggcttctgtatccaaatcctgcagcaaaaatgttggttggtgat
ctcttcaccaggcattactactttctaggaagaatgttgggaaaggccctctatgaaaac
atgttggttgaacttcctttcgccagtttctttctgtccaagctgttgggcacaagtgca
gatgttgacattcatcaccttgcatcattggatcctgaaatgtacaaaaacctgctcttc
ttgaagagctacgaaggggatgtggaggaacttggactcaattttacagtggtgaacaat
gagcttggagaggcacaggtggttgaactgaagctgggtggaaaggatattcctgtaact
agtgccaacagaatagcttacatccatcttgttgcggactacaggctcaacaaacagatc
cgaccacactgtcttgcattccgacagggggttgctaatgttgtgaacctagaatggctg
aggatgtttgaccaacaagagcttcaggttttaatatctggagcacaaataccaatagat
ctggaggatctgaaaaacttcacaaattattcaggtggttattcagcagaccatgcagtc
attaaaatattctggattgtggtggagaatttcacgaatgatgaaaagcgcaagttgctg
aagtttgtcaccagttgctctcgaccccctctgctgggatttaaggagctgtacccagcg
ttttgtatacacaatggaggaactgacctggagcgattacccacagccagtacttgcatg
aaccttctgaaacttccagaattttatgatgaaaatcttatgaggagtaaattactttat
gcaatcgaatcagcagcaggctttgagctaagctga
DBGET
integrated database retrieval system
