Chiloscyllium plagiosum (whitespotted bambooshark): 122550113
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Entry
122550113 CDS
T08871
Symbol
shha
Name
(RefSeq) sonic hedgehog protein A
KO
K11988
sonic hedgehog
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
122550113 (shha)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cpla01002
]
122550113 (shha)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cpla00536
]
122550113 (shha)
Peptidases and inhibitors [BR:
cpla01002
]
Cysteine peptidases
Family C46: hedgehog family
122550113 (shha)
Glycosaminoglycan binding proteins [BR:
cpla00536
]
Heparan sulfate / Heparin
Morphogens
122550113 (shha)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Vint
Hint_2
DUF6212
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
122550113
NCBI-ProteinID:
XP_043546650
LinkDB
All DBs
Position
5:102840810..102858929
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AA seq
419 aa
AA seq
DB search
MMLTRIVFVGLICCSLVSPVNACGPGRGYGRRRHPRKLTPLGYKQYIPNVAEKTLGASGR
YEGKITRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNSLAISVMNQWPGVK
LRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYESKAHI
HCSVKAENSVAAKSGGCFPASARVSLENGSTKAVKDLRAGDRVLAADREGRLLYTDFIMF
LDTAREASKVFYVIETREPQTRLSLTAAHLLFAGQQRRRSPGQPRFRATFASNVKPGHLV
YVPDGDGQRVRAATVEKVYLEEREGAYAPLTVQGTLVVNQVLASCYAVIEDHALAHWAFL
PVRMSYAAKSLFSLSDSFTANITGQESGIHWYSSALYQIGRWVLDQASIHPLGMALDSS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgatgttgacgcgaattgtgttcgtgggattgatttgctgttcccttgtctcgcccgtg
aatgcttgtgggccaggccggggctacgggcggaggagacacccccgaaagctgaccccg
ctcggttacaagcagtacatccccaacgtggccgagaagacactgggagcaagtggcaga
tacgaaggcaagataacccggaactcggagaggttcaaggaattgacacccaattacaat
ccggacattatttttaaagacgaagagaacacgggggctgacaggctgatgacacagaga
tgtaaagacaaactgaattccctggcgatctcagtgatgaaccaatggcccggggtgaag
ctcagggtgacagagggctgggatgaggacggccaccactcggaggagtcgctgcattac
gagggccgggccgtggacattaccacttcggaccgtgacaggagcaagtacggcatgttg
gccaggctggcggtggaggcgggcttcgactgggtctactacgaatccaaggcccacatt
cactgttcagtcaaagcagaaaactcggtggctgccaagtctgggggctgcttcccagcc
tcagcccgagtgagcctggagaacggctccaccaaagcggtgaaggacctgagagcggga
gaccgggtgctggcggcggaccgtgagggcaggctcctctacaccgacttcatcatgttc
ctggacacagcccgggaggccagcaaggtgttctacgtgatcgagacgcgggagccccag
acgaggctatccctcacagcggctcacttgctgttcgccgggcagcagcggcggcggagc
ccgggccagccccggttccgggccaccttcgctagcaacgtgaagccgggccatctggta
tacgtgccggacggagacggccagcgagtgcgggccgccaccgtcgagaaggtttatttg
gaggagagggaaggggcttacgccccactgactgtgcagggcaccctcgtggtcaatcag
gtcctggcctcttgctatgccgtgatagaggatcatgcactggcccactgggcgttcttg
ccggttagaatgagttacgcggccaagtccttattttcactcagtgactcattcacagcc
aacattactggccaagaaagcggcattcactggtactccagcgccctgtaccaaataggc
agatgggttttggaccaggcatctattcacccactggggatggcattggactccagctga
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