Chiloscyllium plagiosum (whitespotted bambooshark): 122550172
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Entry
122550172 CDS
T08871
Symbol
gars1
Name
(RefSeq) glycine--tRNA ligase
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122550172 (gars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cpla01007
]
122550172 (gars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpla03016
]
122550172 (gars1)
03029 Mitochondrial biogenesis [BR:
cpla03029
]
122550172 (gars1)
Enzymes [BR:
cpla01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
122550172 (gars1)
Amino acid related enzymes [BR:
cpla01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
122550172 (gars1)
Transfer RNA biogenesis [BR:
cpla03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
122550172 (gars1)
Mitochondrial biogenesis [BR:
cpla03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
122550172 (gars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
WHEP-TRS
OS-D
UvrA_inter
EcoRII-C
YlaC
DUF3993
Motif
Other DBs
NCBI-GeneID:
122550172
NCBI-ProteinID:
XP_043546797
LinkDB
All DBs
Position
5:complement(116319833..116344134)
Genome browser
AA seq
494 aa
AA seq
DB search
MLRRLAVRSRSTVAAAAGLLSLSPGAWCCTRSVCVSAPGLQKQKPLWQRVSRVMEGDAGR
GEQVLAPLRLAVREQGELVRKLKAENFPQVDVDKAVAELKARKRILEAKELALQPKDDIV
DRTKMEDTLKRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNILQIWRQHFIQEEQILEID
CTMLTPEPVLKTSGHVDKFADYMVKDVKNGECFRADHLLKAHLQKLMSDKKCSAEKKAEM
ENVITQLDNYSQQELTDLFVKYNVKSPVTGNDLSPPISFNLMFQTSIGPGGNMPGYLRPE
TAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEIEHFVDPNE
KTHPKFEAVADLQILLYSSQAQTSGQSARTMRLGDAVEQRIINNSVLGYFIGRIYLFLLK
VGVSAGKLRFRQHMDNEMAHYACDCWDAEAKTSYGWIEIVGCADRSCYDLACHARATKVP
LVAEKALKEPISFA
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgctccgccgcttggccgtccggagccggtctaccgtagctgccgcggccgggttgctg
tcgctgtcccccggggcgtggtgctgcactcggtcggtgtgcgtgtcagcgccgggtctc
cagaagcagaagccgctgtggcagcgcgtgtcccgcgtgatggagggagacgcgggccgt
ggggagcaggttctggcgccgctcaggctggcggtgcgggagcagggtgaacttgttcgg
aaacttaaagcagagaattttccacaggtggatgtcgataaagctgtggccgagcttaaa
gctcggaaaaggatcctggaggctaaggagctggctctgcagccaaaggatgacatagtt
gaccgaacaaaaatggaggataccctaaagaggaggtttttctatgatcaagcttttgcg
atatatggaggtgtgagtggcctgtatgactttggccctgtcggctgtgctctgaagaac
aacatcctgcagatctggcggcagcatttcatccaggaggagcagattctggagattgac
tgcacgatgctgactcctgaacctgtcctgaaaacatctggacatgtggataagtttgct
gactacatggtgaaggacgtgaagaatggggaatgtttccgtgctgatcatctgttgaaa
gctcacctgcagaaactgatgtccgataagaagtgctcagcagagaagaaagccgagatg
gaaaatgtcatcactcagctggataattacagccaacaggaattaacggatctctttgtg
aaatataacgtcaagtctccagtcacggggaacgatttgtctccacctatctccttcaat
ctgatgttccagacatccattggaccaggagggaacatgccagggtacctcagaccagaa
acagcccagggaatcttcctgaactttaaacggctgctggagtttaaccagggaaagctt
ccctttgctgctgcacagataggaaattcatttcggaatgagatttctccacgatcaggg
ctcatccgtgtcagagaattcacgatggcagaaattgagcattttgtggatcccaatgag
aagacccaccctaagtttgaagctgtggcagatttacagatcctgctgtactccagccaa
gctcagactagcgggcagtcagcacggactatgcgactcggcgatgctgttgaacagcgc
atcatcaataactcggtgctgggttacttcattggacggatttacctcttcctgctgaag
gtgggtgtatcggctggaaagctgcgtttccggcagcacatggacaatgagatggcgcac
tacgcctgtgactgctgggatgctgaggccaaaacctcttacggctggatcgagatagtt
ggctgtgctgatcgatcctgctatgatctcgcctgtcatgccagagccaccaaagtgcct
ctagtggctgaaaaggctttgaaggagcctatatcctttgcatag
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