Chiloscyllium plagiosum (whitespotted bambooshark): 122550207
Help
Entry
122550207 CDS
T08871
Symbol
exosc4
Name
(RefSeq) exosome complex component RRP41
KO
K11600
exosome complex component RRP41
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122550207 (exosc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpla03019
]
122550207 (exosc4)
Messenger RNA biogenesis [BR:
cpla03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
122550207 (exosc4)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
122550207 (exosc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
122550207
NCBI-ProteinID:
XP_043546902
LinkDB
All DBs
Position
5:122097613..122100949
Genome browser
AA seq
245 aa
AA seq
DB search
MAGMELFSDQGYRVDGRKPTELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEVRG
ARSKALHDKAMVNCQYSMATFSTGERKRRPHGDRKSSEMTLHLKQTFEAAILTQLYPRSQ
IDIYVQILQADGGNYCACVNAATLAVIDAGIPMRDYVCACSTGFVEDTPLVDLSYIEESA
GGPQVALALLPKSQQIALLEMNSRLHEDHLEKVVDAAAKACGDVYAVLDRVVREHVQEVT
TLVGE
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggcggggatggagttgttctccgatcagggataccgcgtggacggcaggaagcccacc
gaactgcggaagattcaggccagaatgggagtgttcgcccaggccgacggctcggcttat
attgagcaggggaacaccaaggcgctggcggtggtttacggtccgcatgaggttcgtggt
gctcgcagtaaagccctacatgacaaagcaatggtaaactgtcaatacagcatggcaacc
ttcagcacaggcgagcgtaagaggagaccccatggagaccgcaagtcgtctgagatgacc
ttgcacctgaaacagacatttgaagctgccattttgacacagctttacccacgttcccag
attgacatttacgtgcagatcttgcaggcagacggtggcaactattgcgcttgtgttaat
gcagcgacactggctgtgatcgacgcaggaatccccatgcgggactacgtatgtgcctgc
tccacaggctttgtcgaggacacccccttagtggacctcagctacatcgaagagtcagct
gggggtccccaggtggccctggccctgctccccaagtcgcagcagattgctttgctggaa
atgaactcgaggctgcatgaggaccacctggagaaagtggtggacgcagcggcaaaagcg
tgtggggatgtgtacgccgtgttggaccgtgtggtcagggagcacgtgcaggaagtaacc
acgctggtgggggagtga
DBGET
integrated database retrieval system
