Chiloscyllium plagiosum (whitespotted bambooshark): 122550320
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Entry
122550320 CDS
T08871
Name
(RefSeq) patched domain-containing protein 3-like
KO
K24682
patched domain-containing protein
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cpla04990
]
122550320
Domain-containing proteins not elsewhere classified [BR:
cpla04990
]
Other domain-containing proteins
Patched domain-containing proteins
122550320
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
MMPL
DUF1694
Motif
Other DBs
NCBI-GeneID:
122550320
NCBI-ProteinID:
XP_043546979
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Position
5:complement(84956717..84970645)
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AA seq
610 aa
AA seq
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MGTSEYSLLGIPDDFQYNLGLDCVRNKVWVAALGVISAGLAVLSGFGLLLHCGMKFAINT
ANAPFLILGIGVDDMFVMLASWQTTDVTDKIEDRLADTYAEAAISITITTLTDVLAFYIG
IMTPFRSVQSFCVYTGTTVLFCFIYNITFFGAVLALNGRREASNRHWLTFRKVKSDQEPE
DSKCYSMCCVGGAYNSETGAELEHPVYFFFQKYYGPWLTNIWTKALVVVLYIGYLAVSIY
GCINIKEGIDLRNLAFDGSYVIKFYDDQSAFFSKYGPRVMVAVTEPVEYWDSTVQDEIET
CMGRLENNLYVDPELSESWLRVYIAITKQMLIDIQEKNAFLGNLSILFHIVPVFEHDIRF
SESKQRIDASRFFIQTINVNTPVAEKNMLIELRKLAQECQIPLLVYHPAFIYFDQYLVIV
SNTIQNVVVAAAAMLIIALLLIPNPICSIWVTFSTASVLVAVAGFMTFWGVNLHSISMIN
LVICIGFSVDFSAHISYAFVSSDRETANERSIDALYSLGYPIIQGALSTILGVVVLAAAA
SYIFRTFFKIMFLVITFGAVHGLIFLPVFLTFSANCRKSNSAKSDKRTNPEGNPGNSNEA
LEQKDENAKI
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgggaaccagtgaatatagtttacttggaattccagatgactttcaatataatctcggg
ttggactgtgtgaggaataaggtatgggtcgctgctctgggagttatatcagctggatta
gctgtactgtcaggattcggactgctgttacattgtggaatgaaatttgctatcaatacc
gccaatgcaccttttctgattctaggtattggtgtagatgatatgtttgtcatgctcgcc
agttggcaaacgactgacgtcacagataagattgaagatcgccttgctgatacatatgct
gaagcagccatctctattacaatcaccactctgactgatgttttggctttttatattggc
attatgacaccttttcgatctgtgcagtcattctgtgtttacacaggcacaacagttctg
ttttgcttcatttataacattacattttttggagctgttcttgcattgaacgggagaaga
gaagccagcaacaggcattggctgacattcagaaaagtcaaaagtgatcaggaaccagaa
gactctaaatgctattcaatgtgttgtgtgggtggagcttataatagtgagactggtgcc
gaactagaacatccagtttatttcttctttcagaaatattatggtccctggctcacaaac
atttggaccaaggcacttgtggttgtcctatacattggttacttggctgtcagtatttat
ggttgtataaatatcaaagagggaattgatctcagaaatctggcctttgatggttcttat
gtgattaaattctatgatgatcaaagtgcttttttctcaaaatatggaccacgtgttatg
gttgctgtcactgaacccgtggaatattgggattccactgttcaggatgaaattgaaacc
tgcatgggcagattggaaaacaacttgtatgtagatcctgaattgtcagaatcctggctt
cgtgtgtacattgccataactaaacagatgttaatagacattcaggaaaaaaatgcattc
ttgggaaatttatctatattgtttcacattgttcctgtatttgaacatgacattaggttt
tcagaaagtaagcaaagaattgatgcttctcgctttttcattcagaccattaatgtcaat
actccagtcgctgagaaaaacatgctgattgaattaagaaagctggcacaggaatgtcaa
atccctttgctggtgtaccatcctgcatttatctattttgatcaatatcttgttattgta
tccaacacaatacagaatgtagttgttgctgctgctgcaatgctgatcattgcgctattg
ttaatacctaatccaatctgctctatatgggtaacattttctactgcatcagttttagtg
gctgtggctggttttatgacgttttggggtgtcaatttacattcgatatcaatgattaat
ctggtcatttgtattggtttttctgtggacttttcagctcacatttcatatgcatttgtg
tctagtgacagagaaactgcaaatgaacgaagtattgatgcattatacagccttggatat
cccatcatccaaggggccctttcgaccatactgggtgtagttgtactggctgctgcagca
agttacatatttaggacattttttaaaatcatgtttcttgtcataacgtttggggctgtt
catggccttatatttttgcctgtgttcctgacatttagtgcaaactgcagaaagtcaaac
agtgcaaaatcagataagagaacaaatccggagggaaaccctggcaattccaacgaggca
ttggaacaaaaggacgagaatgcaaagatttag
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