Chiloscyllium plagiosum (whitespotted bambooshark): 122550453
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Entry
122550453 CDS
T08871
Name
(RefSeq) nectin-3-like isoform X1
KO
K06592
poliovirus receptor-related protein 3
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04514
Cell adhesion molecules
cpla04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
122550453
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
122550453
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cpla04515
]
122550453
04090 CD molecules [BR:
cpla04090
]
122550453
Cell adhesion molecules [BR:
cpla04515
]
Immunoglobulin superfamily
Nectin family
122550453
CD molecules [BR:
cpla04090
]
Proteins
122550453
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
V-set
ig
C2-set_2
I-set
Ig_2
Ig_6
Ig_5
Receptor_2B4
TM_ErbB1
Formyl_trans_N
Syndecan
PDGLE
Motif
Other DBs
NCBI-GeneID:
122550453
NCBI-ProteinID:
XP_043547129
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All DBs
Position
6:11575675..11701278
Genome browser
AA seq
524 aa
AA seq
DB search
MAGRQPPAAAPLLLATLLLLPGTLAGPVVVDQKVSAILGKNVTLKCLVTVTETVTQISWE
KQDHGTSDTVAVYHPHFGVSIQGNYVGRADFTNPSLKDATILIKRVQFSDSGNYICKVVT
FPLGNYQETSIVTVIVEPTITVGGGPEPLVDGANETVAAVCTAANGKPAASVFWETDLIG
EKEQTKISAPNETVTVVNQFKIVPSRFVRKRPITCIVIHPSFNTTIRVPYVLDVQYAPEV
TVLGYDGNWFVGRQNVQLKCKADANPSPSAYIWTRLEKPLPENLQIENDTLTFNRPLNYN
DSGIYICDVVNIHGQRKNQKVVQIREPPTTTLLSTTLPPIHSTVGITSVPAFTKRSMIPQ
STLESVKSDSLGTIIGGVVGGALFLMLVVIIIVMVYLRRRRTFRGDYYTKQYAGTTDIQK
DSQMDVLQSNRIEPYTDYEKSERKLEPNNIFQDYPIEVQKSKWQSADNINNRYTEGVELP
VDYYEDRKISNAPPYLHDDYYDENEDDLISHLDGSIISRREWYV
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggcggggagacagcctccagccgcagcaccgttactgctcgcgacgctgctcctgtta
cccggtaccttggctggaccagttgttgttgatcagaaagtgtctgcaattttgggcaaa
aatgtcaccttaaagtgtttagttacagtgacagaaactgtaactcagatttcctgggag
aagcaagatcatgggacctcagatacagtcgcagtttatcatccgcattttggagtctca
attcaagggaactatgtaggaagagctgatttcacaaacccatctttaaaagatgcaaca
attcttattaaaagagttcagttttcagattctggaaactacatctgcaaggtggtcact
ttcccattgggaaattaccaagaaacaagcattgtgactgtgattgtggaacccactata
actgtgggaggtggccctgaaccacttgtggatggtgccaatgagacagttgcagcagtt
tgcacagcagctaatggaaagcctgcagcaagtgttttctgggaaaccgacctcattgga
gaaaaggaacagacaaaaatttctgccccaaatgaaactgtgactgttgtaaatcagttc
aagattgttccatcccgatttgtgaggaagaggccaatcacctgcatagtgatacatcct
tcatttaataccactattcgagtcccatatgtattggatgtgcaatatgcacctgaagtt
actgtactgggttatgatggaaactggtttgttggtagacaaaatgtgcaactcaagtgt
aaagctgatgcaaacccatcgccttctgcatacatatggaccagattggagaaaccttta
ccagagaatttgcagattgaaaatgatactttaactttcaacagaccgctcaactacaat
gattctggtatctatatctgtgatgtagtaaatattcacggacaaagaaaaaatcaaaag
gttgttcaaataagagagccacccactacaaccttgctatcaacaaccttgccaccaatc
cactcaacagtgggaatcacaagtgtacctgcttttaccaaaagatccatgattcctcag
tcaaccttggaatctgtgaagagtgacagtttaggaaccatcattggtggtgtagttggt
ggcgctctttttcttatgctagtggttatcatcattgtaatggtctacttgagacgtcgg
cgtaccttccgtggagactactacacaaagcagtatgctgggactacagacatacagaag
gactctcagatggatgttttacaatcaaatagaattgaaccatacactgattatgagaaa
agtgaacgaaagctcgaaccaaataacatattccaggattatcccatagaggtgcagaaa
agtaaatggcaaagtgcagacaatataaataacagatacactgaaggagttgagttaccc
gtcgactattatgaagatagaaaaatttccaatgcacctccatatttgcatgatgactat
tatgatgaaaatgaagatgacctcatttcacacttagatggttcaatcatttctcgccgg
gagtggtatgtctag
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