KEGG   Chiloscyllium plagiosum (whitespotted bambooshark): 122550471
Entry
122550471         CDS       T08871                                 
Name
(RefSeq) collagen alpha-2(IV) chain-like
  KO
K06237  collagen type IV alpha
Organism
cpla  Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04382  Cornified envelope formation
cpla04510  Focal adhesion
cpla04512  ECM-receptor interaction
cpla04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cpla00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    122550471
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    122550471
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    122550471
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    122550471
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cpla04147]
    122550471
   00536 Glycosaminoglycan binding proteins [BR:cpla00536]
    122550471
Exosome [BR:cpla04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   122550471
Glycosaminoglycan binding proteins [BR:cpla00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   122550471
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 122550471
NCBI-ProteinID: XP_043547172
LinkDB
Position
6:complement(13634967..13756984)
AA seq 1510 aa
MGLKGPPGAMGPVGRPGPPGPPGPKGNDGIGFQGRTGDKGEPGPPGLPGSRIEDTSQVSA
PGNKTGEKGDRGERGNEGELGDPGEPGAPGPKGEKGEEGIMGLPGLRGESGFNGPPGSEG
RKGLPGTPGLPGFDGQPGLKGDRGDPGRPGQSITFTGLIPKGPKGWPGLEGERGPKGEEG
FYGREGPPGLPGETAPFPGNPGPPGLPGHSGAKGEKGDQGLPALQPGFPGFPGKSGPPGP
PGPPGLIGSTEFIGDPGEKGQRGYPGPRGRPGDKGDRGHCACDVEGASHVGPRGPAGAPG
YPGIPGVAGQLGDEGSPGPFGAPGIQGVTGEAGAHGPKGQKGDSVFISTITTKGSKGDQG
QPGLTGQPGQPGIPGNNGKPGRQGYPGIPGDALEGYPGDVGSPGVPGRKGIPGRPGLPGV
GIQGPRGRPGPPGDFGPAGTPGIPGLPGIPGTPGDCIDRQEILPVGSGIPGFQPAIPCGT
PGLPGLRGPPGLPGDKGEKGPQGFPGLSRPGYPGRKGYVGAPGPGIPGPPGFVGPRGDPG
SPGPPGSTGNTGLPGLPGRPGATGEKGLPGDAIGAVPGYPGEPGQPGHPGSKGEKGDAGG
IGWKGADGVPGVKGLSGEEGKPGLPGPTGVPGVRGPPGAKGQDGSPGLQGIPGFPGPQGS
FGFKGDRGDRGPPGPAGMKGLPGIPGIQGSRGDAGFPGSPGRFGVDGLPGLDGLKGLKGS
PGMAGFPGVEGFQGRPGLPGLKGEAGSPGIIGNWGSTGVKGIKGDRGQTGPPGPPPPIEP
AMMVRVKGEKGDDGLPGEPGFVGPRGLKGMPGYPGQQGHPGLPGPPGQQKGIPGFPGVPG
EPGSKGMPGAPGPPGIRGFPGMFGEKGVSGNPGLPGRLGIPGSPGLKGELGDTINIPGSP
GYKGKIGDPGLKGASGPPGLPGKRGSPGEPGIEGLKGSLGDQGFTGKQGSPGYPGLVGDR
GSRGPGGSTGPKGFMGFPGYRGAKGSLGPDGLPGLDGLKGNKGFPGSPGLNARGTPGQTG
HQGEKGERGIPSTKPGELGLPGGVGARGDVGEPGLVGSMGPPGDPGPLIPSNKPGKAGDP
GPKGYDGPQGYPGQPGPFGRLGQPGNKGEIGNPGASGFVGSPGIPGEKGASGLPGINGIP
GNKGQRGDQGVMGYPGKAGPQGDPGVPGQKGSVGLAGLLGLPGPQGPAPSPQPFTAPRGA
DGTPGNPGRHGFPGDPGPKGVPGDEGLKGPPGKPGIPGLTGSPGRIGPRGEAGPVGQQGS
LGFKGVPGTQGVRGMEGMPGRSVSVGYLLVKHSQSQEIPPCPLGMNKLWDGYSLLFVEGQ
EKAHNQDLGLAGSCMPRFSTIPFVYCNINNVCYFASRNDKSYWLSTNAPIPMMPVADAEI
KQYISRCSVCEAPSLAVAVHSQDITIPMCPTGWRSLWIGYSFLMHTAAGSEGGGQSLVSP
GSCLEDFRTTPFVECNGARGTCHYFANKHSFWLSTVDPSQQFKEQPVPDTLKAGQLLTRV
GRCQVCMKNL
NT seq 4533 nt   +upstreamnt  +downstreamnt
atgggtctcaagggtcccccaggagcgatgggcccagtgggtcgtccaggacctccagga
cctccaggacccaagggcaatgatggaatcggtttccagggacgaactggtgacaagggt
gagccaggtccgccaggtctacctgggagcaggatcgaggacaccagccaagtttctgca
ccagggaataaaacgggagaaaagggtgacagaggagaacgaggaaatgaaggcgaatta
ggtgaccctggggaaccgggagctcctggtccaaagggtgagaaaggagaagagggaatc
atgggccttccaggattaaggggtgagagtggcttcaatggacccccaggttctgaagga
cgcaaaggtctcccaggtaccccaggtcttcccgggtttgatggtcaaccaggattgaag
ggtgaccgaggtgacccaggccgacctggccagtccatcacatttactggattaattccc
aaaggtccaaaaggttggccaggtctagaaggagagcgtggccccaaaggggaggaaggc
ttctatggccgtgagggcccccccggtctccctggtgaaacagcaccattcccaggtaac
ccaggaccaccaggtttaccaggtcactcaggagccaaaggggagaaaggtgatcagggt
ttgccggctctccagcctggattcccaggatttccagggaaatcaggcccacctggtcca
cctggacctcctggactgataggttccacagagttcattggagatccaggagagaaaggt
cagagagggtaccctggtccaaggggaagaccaggagacaaaggtgaccgagggcattgt
gcctgcgatgtggagggagcttctcatgttggtccccggggtcctgctggagccccaggc
tatccaggcatacccggggtggctgggcagctgggagatgaaggatcaccaggtcctttt
ggagcaccagggattcaaggagtgactggtgaggctggagcccatggccctaaaggacag
aaaggagattccgttttcatctccaccataaccacgaaaggttccaaaggagaccaagga
cagccaggattaacaggacaacccggacagcctggtattccaggaaataatgggaaacca
ggcagacaaggatatccaggaatcccaggcgatgctttggaaggttaccctggtgatgtt
ggtagcccgggtgtcccgggcagaaaaggaatcccagggagacctggcctgccaggggtt
ggcattcagggacctcggggaagaccagggcctcctggtgactttggacctgctggtaca
ccaggaattccaggacttccaggcatccctggaactccaggtgactgcattgacagacag
gaaatcctgccggtgggcagtggtatcccaggattccaaccagcaattccctgtggaact
ccaggacttccaggactgaggggcccaccaggtttgcccggagataaaggtgagaaaggt
ccacagggattcccaggattatcccgaccaggatacccaggaaggaaaggttatgttggt
gctccagggccaggaattccagggccaccaggttttgttgggccccgtggagatcccggt
tcaccaggcccacctgggtcaactgggaatactgggcttccgggactaccgggaaggcca
ggagcaactggtgaaaaaggcttgcccggagatgcaattggggcagtgccgggataccct
ggggaaccaggccaaccaggtcatccaggatccaaaggagaaaaaggagatgccggagga
attggatggaaaggtgcggatggagtaccgggagttaaagggctcagtggtgaagaaggc
aaaccagggctacctggccctacaggagttccaggagtgaggggaccacctggggccaag
gggcaggatgggtcaccagggttacaagggatacctggttttccaggccctcaaggttct
tttggtttcaaaggggatcgtggtgacagagggcccccaggcccagctggaatgaaaggt
ttgcctggaattcctggtatccagggatcccgcggggatgcaggattccccggatcccct
ggtcgcttcggagtggatggtctgccaggtcttgatggcctgaaaggtctgaaaggttct
ccaggaatggcggggttccccggtgttgaggggtttcagggtcgacctggcctgcccggc
ttgaagggagaagcgggatcccctggaattatagggaactggggttcaactggagtgaag
ggtattaaaggtgaccgtggacaaactggacctccaggaccacccccacctatcgaacct
gccatgatggtgagagtgaagggggagaaaggagacgacggtttgcctggggaacccgga
tttgttggtcccagagggttgaaggggatgccgggatatccaggacagcaaggacatcct
ggtctcccgggacctccagggcaacagaaaggaattccagggtttccgggagtaccagga
gaacctggaagcaaagggatgccgggagcccctggaccaccaggcatcaggggctttcct
gggatgtttggtgagaagggcgtctcaggaaaccccggcctgcctgggcggctcggtatc
ccaggctcacccggactgaaaggtgaactaggggatacgattaacattccagggagtcct
ggttacaagggcaaaattggcgatccaggattgaaaggagcatcgggtccccctgggcta
ccaggcaaacgtggatctccaggagaaccaggcattgagggcctgaaaggatctctaggt
gatcaggggttcacaggtaaacagggttctcctggttatcccgggttagtgggagacaga
ggatcgcgaggtcctggcggctcaactggtccaaagggattcatgggatttccaggatat
cgaggagctaaaggttcactgggtcctgatggtctgcctggtttagacgggttaaaagga
aacaaaggcttcccaggatccccaggtctaaacgcgagaggaactccaggtcaaactggt
caccagggtgagaaaggggagagagggatacccagtaccaaaccaggggaactcgggctg
ccagggggagttggtgccagaggtgatgtcggtgaaccaggtcttgttggctcaatggga
cctcctggtgatccagggcccctgatcccatcaaacaaaccaggaaaagcaggtgatcca
gggccaaaaggatatgacggtccacaaggctaccctggtcaaccaggtccctttggcagg
ttgggacaacctggaaacaaaggtgagatagggaatccaggtgcatctggcttcgtagga
tcaccagggatccccggtgagaagggagcttctggtcttccaggtatcaatggcatccct
ggaaataaaggtcaacgaggtgaccagggtgtaatgggttaccctgggaaagctggacca
caaggagaccctggagttcccggacagaaaggttcagtgggtctcgctggtttattggga
ttgcctggcccacagggaccagctccttctcctcaaccattcactgcaccgcggggagct
gatggcaccccaggaaatcctgggcggcatggatttccaggggacccaggtccaaagggg
gttcctggggatgaaggtctgaagggccctccgggtaaaccaggaatccctgggctcact
ggctccccaggaagaataggccccagaggtgaagcaggtccagtcggacaacaaggatct
ttgggatttaaaggtgtccctggcacccaaggggtacgcgggatggagggtatgccaggc
cgaagtgtcagtgttggatacctcttggttaaacacagtcagtcgcaggaaatcccaccg
tgtccacttggaatgaacaaactctgggatggatacagtctgttatttgtggaaggacaa
gaaaaagctcacaatcaggatctggggctggctggatcgtgcatgccaaggttcagtaca
ataccctttgtgtactgtaatatcaataatgtttgctactttgcaagccgaaatgacaag
tcttattggttgtctaccaacgctccgattccaatgatgcctgtggctgatgccgaaatc
aaacagtacatcagccggtgctcagtgtgtgaggctccctctctggcagtcgctgttcac
agccaggacatcacaattccaatgtgccccactgggtggcgcagtctgtggattggttac
tcttttctaatgcacacggctgcaggcagtgaaggtggtggtcagtccttggtgtcacca
ggcagctgcctggaggatttccgaaccactccttttgtggaatgcaatggtgcccgtggc
acgtgccattactttgccaacaagcacagtttctggctatcgactgttgaccccagccag
cagtttaaggagcagcctgtacctgacactctgaaggcaggacagcttctaacccgagtt
gggcggtgccaagtctgcatgaagaatttataa

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