Chiloscyllium plagiosum (whitespotted bambooshark): 122550545
Help
Entry
122550545 CDS
T08871
Name
(RefSeq) SLIT and NTRK-like protein 5 isoform X1
KO
K25836
SLIT and NTRK-like protein 5
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
122550545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_9
LRR_5
LRRNT
Motif
Other DBs
NCBI-GeneID:
122550545
NCBI-ProteinID:
XP_043547381
LinkDB
All DBs
Position
6:39157454..39168698
Genome browser
AA seq
951 aa
AA seq
DB search
MASIHTLLSFSLCLVEGEQPRLGVSTGSPAEMSVWLTRAVALASLVGGWWWRLEAVAGGA
APESYGEACESLCSCQEKDGVLVLGCEDSRIVSVLQLSPPRWPVYHLFLSGNLLSRLQTD
EFLNFSGAAVLHLGGNRIEEIEAGAFRGLHATRRLHLNNNRLEGLRRDAFAGLERLEYLQ
LDYNYLRRLEGDTLDRLPRLQVLILNDNLLAGLPADLFRHVPLTHLDLRGNRLRSLPHAG
LLEHLGGLAELQLEDNPWECGCPLLALKAWLESISYTALVGEVVCETPFRLHGRDLGEVS
RQELCPRRAPAPVPAAAAAAAGVGLDSDWRPPPPALSTRGYFHSSSSSSPVPPPAATAQH
HHPTPVTSSPSRSQAKGTRLPKAPSSRVRVTTSRSPSLKVDGDGDGGEEGQGYPYGPIFA
YQTKPPVPLVCPRQCSCQLQISELGLNVNCQERRIERLSELQPRPYNPRKLYLSGNRLAA
VRRGDFDEAAGLELLHLGHNRIAAVQDGAFANLTQLRRLYLNGNCLEALGAGTFRGLRSL
RYLYLEYNALRRLGPGTLSPAPGLQLLFLHHNLLRALPPRLFAGLNLTRLSLRGNRFASL
PVAGLLEQLASLIQIELDENPWECGCPLLGMKRWLERLGPGALVRRLACHSPKHLAGHDL
ASLRADLICPDHSDEVALSTPSLPQPAPPGAAARPLATAGAATPFPADGGSVVPLSVLIL
SLLLVFLASVFVAAGLFVVVMKRRKRAQSERTSTNNSDVSSFNLQYSVYSHGPAPKAKSP
AGHVYEYIPHPLGHMCKNPIYRSREGNSVDDYRDLHELKVTYRNPVEDERENQLRSPSYS
ISTIEPHEQVSPVQDMDHFYRGILEPGKQSPTGNSVEYKFSSPPNYNYSPNYEVRRQYLH
PERMRETVLYGAPSNVYAEQIRNDYLELKAKLHIEPDYLEVLEKQTTCSQF
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtattcacactttgctttctttctctctctgtcttgtcgaaggtgagcagccg
cggctgggagtgagcaccgggagccccgccgagatgtccgtgtggctaacgcgggccgtc
gccttggcttcgttggtgggcggctggtggtggcggctggaggcggtggccggcggagcc
gcccccgagagctacggcgaggcgtgcgagagcctgtgctcctgccaggagaaggacggc
gtgttggtgctgggctgcgaggacagccggatcgtcagcgtgctgcagctcagcccgccc
cgctggcccgtctaccacctgttcctgagcggcaacctgctgagccgcctgcagaccgac
gagttcctcaacttcagcggcgccgccgtgctccacctgggcggcaaccggatcgaggag
atcgaggcaggcgccttccgcggcttgcacgccacccggcgcctgcacctcaacaacaac
cggctggagggcctgcggagggacgccttcgccggcctggagcgcctcgagtacctgcag
ctggactacaactacctccggcggctggagggcgacaccctggaccggctgccccgcctg
caggtgctcatcctcaacgacaacctgctggccggcctgcccgccgacctcttccgccac
gtccccctcacccacctggacctgaggggcaaccggctccggtcgctgcctcacgccggc
ctcctggagcacctgggcggcctggccgagctgcagctggaggacaacccctgggagtgc
ggctgcccgctgctggcgctcaaggcctggctggagagcatctcgtacacggcgctggtc
ggcgaggtggtctgcgagaccccgttccgcctgcacggccgcgacctgggcgaggtctcc
cgccaggagctgtgcccgcgccgcgccccggcccccgtccccgccgctgccgccgccgcc
gccggggtgggcctggactcggactggaggccgcctccgcctgccctgagcacccggggg
tacttccacagcagcagcagcagcagcccggtccccccgcccgcggccacagcccagcac
caccaccccacccccgtcacctcgtccccctccaggtcccaggccaaaggcacccgcctg
cccaaggcgccctcgtcccgggttagggtgaccacctcccgcagcccgtccctcaaggtg
gacggggacggggacgggggggaggaggggcagggctacccttacggccccatcttcgcc
taccagaccaagccgccggtgcccctggtgtgcccccggcagtgcagctgccagctgcag
atctccgagctcggcctcaacgtgaactgccaggagcggcggatcgagcggctctccgag
ctgcagcccaggccctacaacccccgcaagctgtacctgagcggcaaccggctggcggcg
gtgcgccgcggcgacttcgacgaggcggccggcctcgagctgctgcacctgggccacaac
cggatcgcggcggtgcaggacggcgcgttcgccaacctgacccagctgcggcgcctctac
ctgaacggcaactgcctggaggcgctgggcgcgggcaccttccgcgggctgcgcagcctg
cgctacctctacctggagtacaacgcgctgcggcggctcgggcccggcaccctgtccccg
gcgcccggcctgcagctgctcttcctgcaccacaacctgctgagggccctgccgccccgc
ctgttcgccgggctcaacctgacccggctcagcctgcggggcaaccgcttcgcctcgctg
ccggtggccggcctcctggagcagctcgcctccctgatccagatcgagctggacgagaac
ccctgggagtgcggctgcccgctgctgggcatgaagcgctggctggagcgcctgggcccc
ggcgccctggtgcgccgcctcgcctgccactcccccaagcacttggccggccacgacctg
gcctcgctgcgcgccgacctcatctgcccggaccactcggacgaggtggcgctctcgacg
ccgtcgctgccgcagcccgccccgccgggggcggccgctcggcccctcgccacggccggc
gcggccaccccgttcccggcggacgggggctcggtggtgcccctgtcggtgctcatcctc
agcctgctgctggtcttcctggcgtcggtgttcgtggcggccggcctcttcgtggtggtg
atgaagcggcgcaagcgggcgcagagcgagcgcaccagcaccaacaactcggacgtgagc
tccttcaacctgcagtacagcgtctacagccacggcccggcgcccaaagccaagagcccc
gccgggcacgtctacgagtacataccccaccctctgggccacatgtgcaagaaccccatc
tacaggtcccgcgagggcaactcggtggacgattacagggacctacacgagctcaaggtc
acctaccgaaacccggtggaggacgagcgagagaaccagttgaggagcccctcgtacagc
atcagcaccatcgagccccacgagcaggtctccccagttcaagacatggaccatttctac
cgtggcatcttagagccgggcaaacaatcgcccactggcaacagtgttgaatataaattt
agtagcccaccaaactataattactcaccgaactatgaagttagacgccagtatttgcat
ccggagaggatgagggagacggtgctctacggggcacccagtaatgtatatgccgagcaa
attagaaatgattacctggaactgaaagcaaagcttcacatcgagccggactacctcgaa
gttctcgaaaaacagacaacgtgcagtcagttctaa
DBGET
integrated database retrieval system
