Chiloscyllium plagiosum (whitespotted bambooshark): 122550630
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Entry
122550630 CDS
T08871
Symbol
gabra4
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-4 isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04080
Neuroactive ligand-receptor interaction
cpla04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122550630 (gabra4)
04082 Neuroactive ligand signaling
122550630 (gabra4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpla04040
]
122550630 (gabra4)
Ion channels [BR:
cpla04040
]
Ligand-gated channels
GABA-A
122550630 (gabra4)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
DUF4396
Motif
Other DBs
NCBI-GeneID:
122550630
NCBI-ProteinID:
XP_043547616
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Position
1:91168758..91225323
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AA seq
619 aa
AA seq
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MQLSPKQYNNSEALRMRAASTTSNTVCCGNNFPCKIFKQSDPSRTRQSAAGKGKRLKVWH
AKMVPAKESVIRMSSSYISTLLYFIYVTACIGESSPETKKDEKLYPENFTRILDRLLDGY
DNRLRPGFGGTVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWVDKRLKYDGPIEILRL
NNMMVTKVWTPDTFFRNGKKSISHNMTAPNKLFRIMQNGTILYTMRLTISAECPMKLVDF
PMDGHACPLKFGSYAYPKSEIIYTWTKGPERSVEVPKESSSLVQYDLVGQTVSSGTVKSI
TGEYVVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTM
TTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNIQAEKAKKRAAKPP
ATSPLTPIKTVSASEVVIQHPDSNGNLRKRMNFLVQSDILASEKDYLENDSKSEISRPSI
IGQVPPSTIASPSSVPTPRKFGHTHASPTMPLVRSTPPPPPCTPTIASLTPTPVHRQCGA
TLEQNLLPSRLFGQTSKHSSPTTTSSAPVLPPASPANSGTSKIDKYARILFPVTFGAFNM
VYWVVYLSKDTMEKTEGEM
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgcaacttagtccaaagcagtacaataattccgaggcgctacgcatgcgcgcagcttcc
acaacatcaaacactgtttgctgtggaaacaatttcccttgcaaaatattcaaacaatca
gacccttcaaggacaaggcaatcggcggcggggaaagggaagaggcttaaagtatggcat
gcaaagatggttcctgccaaggagtctgtgatcaggatgtcttccagttacatttccact
ctgctttactttatctacgtgacagcgtgtatcggtgagagctccccagaaaccaagaaa
gatgagaaattatatccagagaattttacccgtatactggacagactcctggacggttat
gacaaccgattgcgacctggattcggcggtactgtgactgaagtgaaaacagatatctac
gtaacgagttttgggccagtgtctgacgttgagatggagtacacaatggatgtgtttttc
cgccaaacctgggtggacaagagactgaagtacgacggccctattgaaattcttcgtctc
aataacatgatggtcactaaagtctggacacccgacacgttcttcaggaacgggaaaaaa
tcaatttcccataacatgaccgctccaaataagctattcagaataatgcagaatggcaca
attctgtacaccatgagacttaccattagtgcagagtgtcctatgaaactggttgatttc
ccaatggatggccatgcttgtccccttaagtttggaagctatgcatatcctaaaagtgaa
ataatatacacatggacaaaaggtcctgaacgatcagtggaggtgcctaaagagtcttct
agcttggtgcaatatgatcttgttggacaaacagtttctagtggcacagttaaatccatc
acaggagaatatgtggtgatgacagtctattttcacttgagaaggaaaatgggctatttt
atgattcagacttacataccctgtattatgacggttattctctctcaagtgtcattttgg
attaacaaggaatcggttccagctcgaacagtttttggtataacaacagttctaactatg
acaacactgagcatcagtgctagacactctctgccaaaggtctcctatgctacagccatg
gactggttcattgcagtttgctttgcatttgtgttctctgctctgatcgaatttgctgct
gttaactacttcacaaatatacaagccgaaaaagccaaaaaaagggctgccaagccgcct
gctacatctccactgactccaataaaaacagtgtctgcctcagaggttgtgattcagcac
cctgattcaaatggcaatttgaggaagagaatgaacttcttggtgcaatcagatattctt
gccagtgaaaaagattacttggagaatgatagcaagagtgagatatcaagaccatctata
attggccaggtacctccctcaactattgcttcaccttcttctgtgccaacacccaggaaa
tttgggcacacacatgcatcccctacaatgccattggtgagaagcacaccaccaccccct
ccttgcactccaacaatagcctcattgacacccactccagttcatcgccaatgtggagca
acactagagcagaacctgctaccatctagactatttggacaaacctcaaagcattcttca
cccaccaccacttcatctgctccagtccttcctccagcttcacctgcaaatagtggaaca
agcaaaattgacaaatatgctcgcatactttttccggttacgtttggtgcatttaacatg
gtctactgggtagtctacctctcaaaagacaccatggagaaaacagaaggtgaaatgtaa
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