Chiloscyllium plagiosum (whitespotted bambooshark): 122550659
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Entry
122550659 CDS
T08871
Symbol
gabrb1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04080
Neuroactive ligand-receptor interaction
cpla04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122550659 (gabrb1)
04082 Neuroactive ligand signaling
122550659 (gabrb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpla04040
]
122550659 (gabrb1)
Ion channels [BR:
cpla04040
]
Ligand-gated channels
GABA-A
122550659 (gabrb1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
122550659
NCBI-ProteinID:
XP_043547680
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Position
1:complement(90884539..91171008)
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AA seq
476 aa
AA seq
DB search
MWRVQDRGCFGILSIPVMVAMVCYAQRVNESNNMSYVKDTVDNLLKGYDIRLRPDFGGLP
VDVGMNIDIASIDMVSEVNMDYTLTMYFQQSWRDKRLSYSGIPLNLTLDNRVADQLWVPD
TYFINDKKSFVHGVTVKNRMIRLHPDGTVLYSLRITTTAACMMDLRRYPLDEQNCTLEIE
SYGYTTDDIEFQWTGGNYAVTGVEKIELPQFSIVEHKLVSKRAVFATGSYPRLSLSFRLK
RNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKI
PYVKAIDIYLMGCFVFVFLALLEYAFVNYIFFGRGPQLQKKATQKPTQPHTKSRLGTNKT
QVDAHGNIPLTTLEIRNEVKASEVFTNINDPRATMFSYDNTNIQYRRPATSRDGFGRSTL
ERHTVQKKGRLRRRTSQLKIKIPDLADVNAIDRWSRVVFPVTFGFFNLVYWLYYVH
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgtggagagttcaggacagaggatgcttcgggattttgtcgatccccgtgatggtggcc
atggtttgctatgcccagagagttaacgagtccaacaacatgtcatatgtgaaagacacc
gtggataacttgctgaaaggatatgacattcgattaagaccagatttcggaggtctccct
gtggacgttggtatgaacatagacattgccagcatagacatggtctctgaagtcaatatg
gattatactctgacaatgtacttccagcagtcctggagagacaagaggctttcatactct
ggaatacctctgaacctcactctagataacagagtggctgaccaactctgggttcccgac
acctactttattaatgacaaaaagtcatttgtgcatggagttacagtgaaaaatcgaatg
attcgtctgcacccagatggcacagtgctgtacagcctgagaatcacaacgacagcagca
tgtatgatggatctgaggaggtaccccttggatgagcaaaactgcacacttgaaatagaa
agctatgggtacacaacggatgacattgaatttcagtggacaggtggtaactatgcagtc
acaggagtagagaagattgaactgccgcagttttccattgtcgaacacaagctggtttca
aagcgagcagtttttgctacaggttcttatccaagactatcactgagttttcgactgaaa
agaaatattggctatttcatcttgcaaacatacatgccctcaattttaatcacaattttg
tcctgggtgtccttctggatcaattatgatgcttctgctgcaagagttgcattaggaatc
acaactgtacttaccatgacaactatcagcactcacctcagggaaacccttcccaagatc
ccctatgttaaggctattgacatttacttaatgggttgttttgtctttgtattcctggct
ttattggaatatgcctttgtcaactacatattctttggaagaggaccacagcttcagaag
aaagcaactcagaaaccaacacagccccacacgaaaagcagacttggaaccaacaaaact
caggtggatgctcatggaaatattccactaacaactcttgaaattcggaacgaagtgaaa
gcttctgaggtgttcacgaatatcaatgatccaagagcgaccatgttttcttatgacaat
accaacatccaatacagaaggccagctaccagcagagatggctttggtagaagcacacta
gaaaggcacacagttcagaagaagggacgcttacggcgacgaacatcacaactgaaaatt
aaaatcccagatttggctgatgtgaatgccatagacaggtggtcacgggtggtctttcct
gttacatttgggttttttaacttggtgtactggctgtactatgtgcactaa
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