Chiloscyllium plagiosum (whitespotted bambooshark): 122550718
Help
Entry
122550718 CDS
T08871
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpla03019
]
122550718
Messenger RNA biogenesis [BR:
cpla03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
122550718
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
UBA_N4BP1_C
zf-CCCH_4
Omega-toxin
Motif
Other DBs
NCBI-GeneID:
122550718
NCBI-ProteinID:
XP_043547799
LinkDB
All DBs
Position
6:75387369..75464301
Genome browser
AA seq
847 aa
AA seq
DB search
MGLNDHTVHENNFVLGLLHLNVESTDKLLHVITSWSMVENTAMDKGYSTTENAVEWIMQD
SDNLDSDNELEQQGIAMLEAGPLNKAHQQLCRSPGLESNLLKCTEVLQDFKIDGEPKPKQ
DLRSTDDDKDYKTKMEFALKLGYSEEQVQLVLNKLGTDALPNDMLGELVKLGNKLDSDTS
CGTSNPGTMTPRDTTSTDSQRSDSPIEELVDDGDNLKPVVIDGSNVAMSHGNKEVFSCRG
IKLAVDWFLERSHKDITVFVPAWRKEQSRPDALITDQEILRKLEKDKILVFTPSRRVQGR
RVVCYDDRFIVKLAYESDGIIVSNDNYRDLQNEKPEWKKFIDERLLMYSFVNDKFMPPDD
PLGRHGPSLDNFLRKRPVVPEHKKQPCPYGKKCTYGHKCKYYHPERGTQPQRSVADELRA
SAKNSIMKTTNDGLVKSNSVPTNTKTEGMFDVKCTAPKRQSDPSIQAPLYNEVEEKLSNK
TRLETRSVPSLLGASNPSAAKVQGCTVSGSGMHVLTQESGVPAQYSTILVNNSHGAHTTY
NQHPKCDSPVDGGYHSMMNPYHNLGVSGTHSPDQFSVDKEYRLDHVGSDCSSEGSISCGS
SDSYVGYNERAYPSSPVTVLEENLKCHQYHNRHQPFLCGYHDPVTRVQSYGQEEQKPLHK
TSASCMASHLQHPVIGARSSCPSEYCPVPLNAQHPQNMHMGRALGTTRIESFSDSRLYEN
LPVRHRKPYTGQETFASWNRLGYGLDSYGYAQGYSLPNNPTQPCYDQFTFQSLPEKREQT
WRMPWNGLPPEPLNPQRLQDARDKIFINLCNIFPADLVRVVMKRNPHMIDAQQLAAVILA
EKSKLGY
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgggtttaaatgatcatactgtgcatgagaacaactttgttctgggactgctacatctc
aatgtggaaagcactgacaaactgctacatgtgataacatcttggtcaatggtggaaaat
acagcaatggataaagggtactctactacagagaatgctgttgagtggataatgcaagac
tctgacaacttggattcagacaatgaattggagcaacagggaattgccatgttggaggct
ggtcctttaaataaagctcatcaacagctttgtagatcaccaggcttagaatcaaatcta
ctaaaatgcactgaggttctacaggatttcaaaatagatggtgaaccaaaaccaaagcaa
gatttaagatcaactgatgatgataaagactacaaaaccaaaatggagtttgcactgaaa
cttggatattctgaagagcaggtacagcttgtcctaaataaattgggaacagatgctctt
ccaaatgatatgctaggcgaacttgttaagctggggaataaacttgattctgatacttcc
tgtggcacaagtaaccctggaactatgactccacgtgatacaacttcaacagattcgcaa
agatctgactctcctatagaagaattggtggatgatggtgataatctaaagcctgtggtc
attgatggtagtaatgtggcaatgagtcatggtaacaaggaagtgttctcctgtcgaggt
attaagttagcagtggactggtttttggaaagaagtcataaagatatcactgtgtttgtg
cctgcctggaggaaggaacagtcaaggcctgatgccctcatcacggatcaagaaatcctg
cgcaagttggaaaaggataaaattctagtcttcacaccatcccggcgggtacaagggcgg
agagtggtttgctatgatgatcgcttcatagtgaaattggcttatgaatccgatggcatc
attgtgtcaaatgataactacagggatttgcagaatgaaaagccagaatggaaaaaattc
atagatgaaagattgcttatgtattcttttgttaatgacaaattcatgccacctgatgat
cctttgggtcgccatggccccagcttggataactttctgaggaagcggcctgttgttcct
gaacataagaagcagccatgtccatatggaaaaaagtgcacttatggccacaaatgtaaa
tactaccacccagaacgaggtacacagcctcaacgttctgtggctgacgaacttcgtgct
agtgcaaagaactcaataatgaaaaccactaatgacggtttggtgaagagcaacagtgtt
ccaactaataccaagactgaaggcatgtttgatgtcaagtgtacagctccaaaaagacag
tctgacccaagtatacaagcccctctttataatgaggttgaagaaaaactcagcaataaa
accagattggaaaccaggtctgtgccttctcttcttggtgcatcaaatccttcagctgca
aaggtccaaggttgtacagtatcaggttctggaatgcacgttttgacacaagaatcagga
gtgccagcacagtactcaacaattctggtgaacaatagccatggagcacacaccacctat
aatcaacatccaaaatgtgactctcctgttgatggaggatatcattccatgatgaatcca
tatcataatcttggtgtatctggtacacatagccctgatcagttttctgtagataaagaa
tacagactcgaccatgtaggttctgattgtagtagtgaaggtagtattagctgtggcagc
agcgattcatatgttggctataatgaacgagcctacccaagttctccagttacagtgctt
gaggaaaatcttaaatgtcaccaatatcataatcgacatcagccctttctttgtggttat
catgatcctgtaacaagagtacaaagttatggccaagaagagcaaaaaccactacacaaa
acttcagcttcttgtatggcatcacatttacaacatccggtaattggagcccgctccagt
tgtccgagtgaatattgcccagtacccctcaatgcccagcatccacaaaacatgcatatg
gggagagctctaggaactacaagaatagaaagtttttcagattcacgtttgtatgaaaac
ctgccagtgagacacagaaaaccttacacaggtcaggaaacatttgccagttggaacagg
cttggctatggtttggattcttatggttatgcacaaggatattcattaccaaacaatcca
actcagccatgttatgatcagttcacattccaaagtttacctgagaaaagggagcagact
tggaggatgccatggaatggcttacctcctgaacctctaaatccacaaaggttacaggat
gcccgtgacaagatctttataaatctgtgcaacatatttccagctgaccttgtgcgggtg
gtaatgaaaagaaatcctcacatgattgatgcccagcaacttgctgcagtgattctagcg
gaaaagtcaaaactgggttattga
DBGET
integrated database retrieval system
