Chiloscyllium plagiosum (whitespotted bambooshark): 122550758
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Entry
122550758 CDS
T08871
Symbol
nup58
Name
(RefSeq) nucleoporin p58/p45 isoform X1
KO
K14307
nucleoporin p58/p45
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122550758 (nup58)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpla03019
]
122550758 (nup58)
Messenger RNA biogenesis [BR:
cpla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122550758 (nup58)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
Nup49_C
FapA
PSY3
Motif
Other DBs
NCBI-GeneID:
122550758
NCBI-ProteinID:
XP_043547910
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Position
6:81051070..81113324
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AA seq
587 aa
AA seq
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MTTGFGFGTAAGNTGGFTLGASSNPGTTGGFNFGNLGTTATTTTATFGGLGSGLFGQKQT
TGFSFGVTSTGTTTTAATTGLTLGTPATTALAGFSLGFNKPAGSATPFAMPIAPSTTGGL
CLSSALPTSTTSSTGFALNLGGAPTSTASVPTGLTLGGALTGLSGSLFQGASTSTAGLGQ
SLGLNLGVSTAAPTTTASEGLGGIDFSGSSDKKNDKGSTGVRPDDSKALKDENLPPVICQ
DVEHFQKFVKEQKQVQEEISRMSFKAMLKVQEDIKALKQLLTVVASGLQRDSLAIDKLKI
ESAQELKNAEIALRTQKIPPGLQHENTAPADYFRQLVEQFEVQLQQYRQQIEELENHLAA
QANSSHMTPQDLSLAMQKVYQTFVALAAQLQSIHESAKILREQYLGYRKTFLGDATDVFE
ARRAETKKWQNAPRVTTGPTPFSIPNAAAVAMAATLSQQQQPATGPQQPLGVNFGTPFAT
CIGAGLQSSGLGSTNLGGFGGTSGFGSNTSGTTSFGFGSTNKPSGSLSAGFGSSTTSGFN
FNNPGITASAGLTFGVSNPSTSAFPNNLGTQLLQLKKPPAGNKRGKR
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccggatttggtttcggtactgccgccggtaacactggcggcttcaccctcgga
gcgtccagcaatcctggaaccacagggggatttaattttggaaatcttggtaccacagcc
acaaccacaactgcaacatttgggggccttgggagtggactgtttgggcagaaacaaact
actggattctcatttggagttacctcaacagggacgacaacaacggcagcaacaacaggg
ctaactttgggaactcctgcaacaacagcattagctggttttagtttaggattcaacaaa
ccagcaggttcagcaacaccttttgcgatgcctattgcaccttctaccactggaggattg
tgcctttcatctgcactgccaacatctacaacaagctctacaggatttgcgttaaatttg
ggtggagcacccacatccactgcatcagtgccaacaggcttaacattgggaggagctttg
actggtttaagtggcagcctctttcagggtgcaagcacttccactgcaggacttggtcaa
tcattggggttgaatcttggggtatctacagctgccccaacaactacagccagtgaaggt
cttggtggaatagatttcagtgggtcgtctgataagaagaatgataaaggttcaactgga
gttaggcctgatgatagcaaagccctgaaagatgaaaatctgccgcctgttatctgtcaa
gatgtggagcactttcagaagtttgtaaaagaacagaagcaggtgcaagaagaaattagc
cgaatgtcctttaaagctatgttgaaagtacaagaggatatcaaagccctgaaacaatta
ttaacagtagttgccagcggacttcagagagattcacttgccattgacaagctaaagata
gaatctgcacaggagcttaaaaatgctgaaatagcactcaggacacagaagataccaccg
ggacttcaacatgaaaatacagcaccagcagactatttcagacagctggttgaacagttt
gaagttcagttacagcagtaccgacagcaaatagaggaactggaaaatcaccttgctgct
caggctaacagttcacatatgactccacaagatttgtctcttgcaatgcagaaagtatac
cagacttttgtggctttggctgcccaactccagtcaattcatgaaagtgcaaagatttta
agagaacagtatcttggctatcggaaaacattccttggagatgctactgatgtctttgaa
gcaaggcgtgctgaaactaagaaatggcagaatgctccacgcgttacaactgggccaact
cccttcagcataccaaatgcagcggcagttgccatggctgcaacattatcacagcagcaa
cagcctgctacaggaccgcaacaacctctgggagttaattttggaacaccattcgccaca
tgtattggtgcaggcttgcagtcaagtggcttaggttctacaaatcttggaggatttgga
ggtacttctggctttggaagtaatacttcaggcaccacctcatttggatttggatcaacc
aataagccctcaggaagcctcagtgcaggctttggcagctcaaccacatctggatttaac
ttcaataatcctgggatcacagcatctgctggcctgacttttggtgtgtccaatccttcc
acatcagccttccccaataatctagggacacagcttctgcaactgaagaaacctccagct
ggaaataaacgaggcaaaagatag
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