Chiloscyllium plagiosum (whitespotted bambooshark): 122550814
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Entry
122550814 CDS
T08871
Symbol
trpc4b
Name
(RefSeq) short transient receptor potential channel 4b
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpla04040
]
122550814 (trpc4b)
Ion channels [BR:
cpla04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
122550814 (trpc4b)
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GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank_4
Ank
Ank_3
PKD_channel
YVC1_C
Motif
Other DBs
NCBI-GeneID:
122550814
NCBI-ProteinID:
XP_043548049
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All DBs
Position
6:complement(91054724..91153023)
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AA seq
995 aa
AA seq
DB search
MAQLYYKRSDNAPYRDRISLRIVRAETELSPAEKAYLSAVEKGDYASVKQALEEAEIYFK
ININCIDPLGRTALLIGIENENLEIIELLLSFNVYVGDALLHAIRKEVVGAVELLLNHKK
PSGEKQVPPILLDKQFSEFTPDITPIILAAHTNNYEIIKLLVQRGVSIPQPHEVRCNCVE
CVSSSDVDSLRHSRSRLNIYKALASPSLIALSSEDPFLTAFHLSWELQELSKVENEFKSE
YEELSHQCESFAKDLLDQTRSSRELEIILNYRDDNSILEVQTANDLSRLKLAIKYHQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWIVKFLTCIGIGLLFPVFSVCYLIAPKSTLGLFIR
KPFIKFICHTASYLTFLFLLLLASQHIDRTDLNMQGPPPTIVEWMILPWVLGFIWGEVKQ
MWDGGLQDYIHDWWNLMDFVMNSLYLATISLKIVAFVKYSGSRQREDWEMWHPTLVAEAL
FAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFY
YETNATEEPNNCKGIRCEKQNNAFSTLFETLQSLFWSIFGLINLYVTNVKARHEFTEFVG
ATMFGTYNIISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFEEGGTLPTPF
NIIPSPKSVWYLISWMRRHLCFKILCKQKRKKPESLGSLGRRAANNLRRNHQYQEVIRNL
VKRYVAAMIRDAKTEEGLTEENFKELKQDISSFRYEVLGLLKGNKVPGKQATTFSTTSRI
SDLNEVFKAEDRTTDHMTVSTKKITCANEQKNKLSFYDLTSLVCPKTMSKLSDNPAACNT
LSNGSTPKATDISNEKQNNKSIVKDSIKNLGFFRKRTKPYNAEQNSNRIYTVSEEITQEE
DRLRNKESDCEDKRNMDQMVVSENNSDIKDLKVSSTWKPEMEEKIQVLSQKQSSDGNTSA
RSLETTEDTLTHDSGNEDSANQWTVTQGDYVTTRL
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atggctcagctgtactacaaaagaagtgacaatgcaccatacagagatcgaatttctctt
cgaattgtgagagcagaaactgaactctctcctgcagaaaaggcttacctgagtgctgtt
gagaaaggtgattacgcaagtgtcaaacaagctcttgaagaagctgagatttattttaaa
atcaacatcaactgtattgaccctctgggacggactgcacttctcataggcattgagaat
gagaacttggaaattattgaacttcttctgagtttcaatgtgtatgtaggagatgctctt
ctccatgccatcaggaaggaagttgttggggctgttgaactactattaaatcataagaaa
cctagtggagaaaagcaagttccaccaatactactagataaacagttttcagaatttaca
ccagatattacaccaataattcttgcagcccacaccaacaattatgagatcataaagctt
cttgtgcagaggggagtgtctataccacagcctcatgaagttcgttgcaactgtgtggag
tgtgtttccagctcagatgttgacagtctacgtcattctcgatcaagactgaacatatac
aaagccttagcaagtccatctttaattgctttgtccagtgaagacccctttctgactgca
tttcatttgagctgggagcttcaggaactaagtaaagtggaaaatgaatttaaatctgaa
tatgaggaattatcacatcagtgtgaatcatttgcaaaagatttattggaccagacaagg
agctcccgggaattagaaataatacttaattatagagatgataatagcattctggaagtg
cagacggctaatgatctttccaggttaaagttggcaattaagtatcatcagaaagagttt
gtcgcccagccaaactgtcagcaactccttgcttcccgctggtatgatgaatttcctggc
tggagacggcgacattggatcgttaaattcctgacctgcatcggcatcggactgctattt
ccagttttttctgtgtgctacttgatagcaccaaaaagcacattaggcctttttattaga
aaaccatttattaagtttatctgtcatactgcatcatatttgacttttcttttcctgctg
ttgttggcatcccagcacattgatcgaacagatttaaacatgcaaggtcctccaccaacc
attgttgaatggatgatacttccctgggtgctaggtttcatttggggtgaagtaaaacaa
atgtgggatggtggacttcaggactacatacatgactggtggaaccttatggattttgta
atgaattctttatatctagcaacaatttctttgaaaattgttgcttttgttaagtacagt
ggttcacgccaacgggaggactgggaaatgtggcatcctacccttgttgctgaagcatta
tttgctattgcaaacatcttcagttcccttcgcctaatttcacttttcactgctaattct
catctgggacctctccaaatatctcttggacgtatgctgttggatattttgaagttttta
ttcatatactgtctggtgctactagcttttgcaaatggtctgaatcaattatacttttac
tatgagacaaatgctacagaagaaccaaataactgcaaaggaataaggtgtgaaaaacag
aacaatgccttctcaacgctatttgaaactcttcagtcactgttctggtcaatatttggt
cttattaacctatacgtgacaaatgtgaaggctcgtcatgaattcacggagtttgtaggt
gccactatgtttggaacatacaatattatctcacttgtggttttgctcaatatgctgata
gctatgatgaacaattcataccaacttattgcggaccatgcagatattgagtggaaattt
gcaaggacaaagctgtggatgagctattttgaagaaggtggaactcttccaactcctttt
aacattattccaagtccaaagtctgtgtggtatttaatatcatggatgcgaagacattta
tgtttcaaaattctctgcaagcaaaagcgaaaaaaacctgaaagtcttggttctctcggg
aggcgcgcagctaacaatttgagacgaaatcatcagtaccaggaagttataaggaatttg
gtaaaaagatatgttgctgcaatgatcagagatgccaaaactgaagaagggctgactgaa
gagaatttcaaggagctgaagcaggatatttctagcttccgctatgaagttttgggtctt
ctgaaaggaaacaaggttcctggtaaacaggccacgacctttagcacaacatctcgaatt
tcagatctaaatgaagtttttaaggctgaagatcgaacaactgaccacatgactgtgtca
acaaagaaaataacatgcgcaaatgaacagaagaacaaactgagcttttatgatttgaca
tctttagtttgtccaaagacaatgtctaagttatcagataatccagcagcatgtaacact
ttgagcaatgggtccacaccaaaagcaactgatatatccaatgaaaaacaaaacaataaa
agtattgttaaagactcaatcaaaaatttaggattctttcgcaaaagaacaaaaccatac
aatgcagagcagaatagcaataggatttacacggtttctgaggaaattactcaagaggaa
gaccgtctcagaaacaaagaaagcgactgtgaggacaaaagaaacatggaccaaatggta
gtgagtgagaataactcagacataaaagacctaaaagtgagtagcacatggaagccagaa
atggaagaaaagatacaagtactttcacaaaaacagtcttcagatggaaacaccagtgct
cgctcattagaaacaacagaggatactctgacacatgattcagggaatgaagacagtgca
aatcaatggactgtgacacagggtgattatgtgacaactagattataa
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