Chiloscyllium plagiosum (whitespotted bambooshark): 122550883
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Entry
122550883 CDS
T08871
Symbol
gabra5
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-5 isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04080
Neuroactive ligand-receptor interaction
cpla04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122550883 (gabra5)
04082 Neuroactive ligand signaling
122550883 (gabra5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpla04040
]
122550883 (gabra5)
Ion channels [BR:
cpla04040
]
Ligand-gated channels
GABA-A
122550883 (gabra5)
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
122550883
NCBI-ProteinID:
XP_043548216
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Position
6:101532101..101644688
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AA seq
456 aa
AA seq
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MDIGRLAGFSKLCLLLVSSLTWRPSLPQSVSPALKQHTNDNITIFTRILDGLLDGYDNRL
RPGLGERITEVKTDIYVTSFGPVSDTEMEYTIDVFFRQSWKDERLKFKGPMQLLSLNNML
ASKIWTPDTFFHNGKKSIAHNMTTPNKLLRLVEDGTLLYTMRLTISAECPMQLEDFPMDV
HACPLKFGSYAYPTSEVIYTWTNETHKSVVVAEDGSRLNQYDLLGQTVGSELIPSSTGEY
VIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQMSFWLNRESVPARTVFGVTTVLTMTTLS
ISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRSWAWDGKKAYEAFQSKK
KETLAKNMNNAYAIGGMTYTPNMTKDPVIPSISKSTAVQMRAEERAMESKKSYNSVSKID
KMARVVFPVLFGIFNLVYWATYLNRDPVIKVDTVPN
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggacattgggaggttggcaggattcagcaagctgtgcttgctccttgtgtcgagtctg
acctggcgcccgagcttgccccagagcgtctccccagcgctgaagcaacacaccaacgac
aatatcaccatcttcaccagaattttggatggtctgctggacggatacgataacaggctg
cgaccgggactcggagaaaggatcacggaggttaaaacagacatctacgttacaagtttt
ggcccagtctcggacactgaaatggagtacacgatagacgtatttttccgccaaagctgg
aaggacgagcgcctgaagtttaaaggaccaatgcagctgctgtctctcaacaacatgctg
gcgagtaagatctggactccggacaccttctttcacaatggcaagaaatcgatagctcac
aacatgaccacccctaacaagctactccggctggtggaggatggtactttgctctacacc
atgaggttaaccatttctgccgagtgtcctatgcaactcgaagattttcctatggatgtt
catgcttgcccccttaaatttggaagctatgcatatccaacctcggaggtcatttacaca
tggacaaacgaaactcacaaatcggtggtcgtggcagaagatggatcacgtctaaatcag
tacgatttattaggtcaaactgtgggcagtgaacttatcccgtcaagcacaggcgaatat
gtaataatgacagcacactttcatttgaagagaaaaatcggttattttgtcattcaaacc
tatctcccctgcattatgactgttatcttatcccagatgtcattttggttgaacagagaa
tctgtccctgccagaacagtgtttggtgtaaccacggtgctgacaatgacaacattgagc
atcagtgcacggaactccctgcctaaagtagcttatgccactgcaatggactggttcata
gcagtgtgttacgcatttgtcttttctgctctgattgaatttgcaacagtaaattacttc
accaaacgaagctgggcatgggatggtaaaaaggcatatgaagcttttcaatcgaagaaa
aaagaaaccttggcaaagaacatgaacaatgcttatgcaattggaggaatgacctacacc
cccaacatgacgaaggaccctgtcatcccaagtatttcaaagagtacagctgtgcaaatg
agggctgaggaaagggccatggaaagtaagaagtcttacaacagcgtcagtaagattgac
aaaatggcccgggttgtgtttcctgttctttttggaatatttaatttagtttactgggca
acatatttgaacagagatccagttataaaagtagacactgttccaaattaa
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