Chiloscyllium plagiosum (whitespotted bambooshark): 122550892
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Entry
122550892 CDS
T08871
Symbol
cyfip1
Name
(RefSeq) cytoplasmic FMR1-interacting protein 1 homolog isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04810
Regulation of actin cytoskeleton
cpla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
122550892 (cyfip1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
122550892 (cyfip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpla03019
]
122550892 (cyfip1)
Messenger RNA biogenesis [BR:
cpla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
122550892 (cyfip1)
Factors involved in mRNA localization
Other mRNA localization factors
122550892 (cyfip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Motif
Other DBs
NCBI-GeneID:
122550892
NCBI-ProteinID:
XP_043548239
LinkDB
All DBs
Position
6:complement(103503740..103693073)
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AA seq
1253 aa
AA seq
DB search
MTAQVTLEDALSNVDLLEDLPLPDQQPCIEPPPSSLLYQPNFNTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGQEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMNFMYFQRNAIDRFCNEVKRLCHAERRRDFVSEAYLLTLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMSDPQSIQESQNLSMFLANHNKITQSLQQQLEVIPGYEELLAD
IVNICVDYYENRMYLTPGEKHMLLKVMGFGLYLMDGTVSNIYKLDAKKRINLNKIDKFFK
QLQVVPLFGDMQIELARYIKTSAHYEENKSRWASTSSSSSPQYNIVEQMIQIREDHMRFI
SELARYSNSEVVTGSGRQESQKTDAEYQKLSELALQGMQLLSQWSAHVMEVYSWKLVHPT
DKYSNKDCPDNAEEYERATRYNYTSEEKFALVEVIAMIKGLQVLMGRMESVFNHAIRHTI
YAALQNFAQKTLREPLRQAIKKKKNVIQSVLQAIRKTICDWDVGHEPANDPALRGEKDPR
GGFEIKVTPRAVGPSSTQLYMVRTMLESLIADKSGAKKTLRSSLEGPTILAIEEFHRHSF
FYTHLLNFSETLQHCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEASM
MEYVLYSLDLYNDSAHYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKILAGS
LLLDKRLRAECKNQGANIPTPPSNRYETLLKQRHVQLLGRSIDLNRLITQRISAAMYKSL
ELAITRFESEDITSIVELEGLLEVNRMSHKLLSKYLTLDSFDAMFREANHNVSAPYGRIT
LHVFWELNYDFLPNYCYNGSTQRFVRTVLPFSQEFQRDKQPNAQPQYLYGTKALNLAYSS
IYSNYKNFVGPPHFKAICKLLGYQGIAVVMEELLKVVKSLLQGTILQYVKTLMEVMPKIC
RLPRHEYGSPGILEFFHHQLKDIVEYAELKTVCFQNLREVGNAVLFCLLIEQSLSLEEVC
DLLHAAPFQNILPRIHVKEGERLDTKMKRLEAKYAALHLVPLIERLGTPQQVAIAREGDL
LTKERLCCGLSMFEVILTRIRQFLDDPIWRGPLPTNGVMHVDECVEFHRLWSAMQFVYCI
PVGAHEFTVEQCFGDGLHWAGCMIITLLGQQRRFDVLDFCYHLLKVQKHDGKDDVLKNVP
LKKMVDRIRKFQILNDEIFAILNKYLKSGDSENVPVEHVRCFQPPIHQSLASS
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgactgcacaagtgactttggaggatgccttatccaacgttgaccttctggaagattta
ccattgcctgatcaacagccttgtattgaaccaccaccttcatcacttttgtaccaacca
aatttcaacaccaactttgaagatagaaatgcatttgttacaggaattgcaagatacatt
gagcaagcaacagttcattccagcatgaatgaaatgctagaggaggggcaggaatatgct
gttatgctgtatacttggagaagttgttcaagagctattcctcaggttaaatgcaacgag
cagccaaatagagtagaaatttatgaaaagacagtggaagttcttgagccagaggtcact
aagcttatgaatttcatgtatttccagcgcaatgcaattgatcgattttgtaatgaggtg
aagcgactctgtcatgcagagaggaggcgagattttgtttcagaagcttatcttctcaca
ctgggcaaattcattaacatgttcgcagtattggatgaattaaagaacatgaaatgcagt
gtgaaaaatgaccactctgcgtacaaacgagctgctcaatttcttcggaaaatgtcagac
ccacaatctatacaagaatctcaaaacctctccatgtttcttgcaaatcataacaaaatt
actcagtcgctgcagcagcaacttgaagtcattccaggctatgaagagcttcttgctgac
attgtaaatatttgcgttgattattatgagaatagaatgtaccttactcctggcgagaaa
cacatgctgctcaaggtgatgggctttggactttaccttatggatggaactgtaagcaat
atatacaagcttgatgccaagaagcgaataaacttgaacaagattgacaaattttttaag
caattgcaggtggtgcctttatttggtgacatgcagatcgagttggccaggtacatcaag
acaagtgctcattatgaggaaaacaaatcaagatgggcctccacatcttccagtagtagc
cctcaatacaacattgtggaacaaatgattcagatccgggaagatcacatgcgtttcatc
tctgaactggctcgctatagcaatagtgaggtagtaacagggtcaggtcgacaagaatct
cagaaaactgatgctgaataccagaagctgtctgaacttgctttacagggcatgcaacta
ttgtcccaatggagtgctcacgtaatggaagtgtactcttggaaacttgtgcatcccact
gataagtactctaataaagactgcccagataatgcagaagagtatgagagagcaactaga
tataattacacaagtgaagaaaagtttgcacttgttgaggttattgccatgataaaagga
ttgcaggtgctgatgggcagaatggagagtgtgttcaatcatgcaattcgacataccatt
tacgctgcgctccaaaactttgctcagaaaacacttcgtgagcctttgcgtcaggctatc
aagaagaagaagaatgtgattcagagtgttctgcaagcaattagaaagactatttgtgat
tgggacgtcggacatgagccagcaaatgatcctgcactccgaggagagaaagatccgaga
ggaggctttgagatcaaagttactccccgggcagtcggaccatctagtacccagctctac
atggttagaactatgctagagtccctcattgctgacaaaagtggcgcaaagaaaaccttg
agaagtagtcttgagggccccaccattttggcgatagaagaatttcaccggcattcattc
ttctacacgcatttgctcaatttcagtgaaactcttcagcattgctgtgatctgtctcag
ctttggttcagagaattcttccttgaactgactatgggcagaagaatccagtttccgatt
gagatgtctatgccatggattttgactgaccatattttggagaccaaagaagcctcaatg
atggagtatgtattatattccttggacctttacaatgacagtgcccattatgcactgact
aaattcaagaagcagttcctttatgatgagattgaagcagaggtaaacctctgctttgac
caatttgtatataaattggctgatcaaatatttgcttactacaagattctggcaggaagc
ctccttctggacaaacggctgcgagcagagtgtaagaatcagggagctaatatacctaca
cctccatcaaatagatatgagactttattgaaacaaagacatgtacagcttcttggtagg
tcaatagacctgaatcggctgatcactcaaagaatttcagcagcaatgtacaaatcgtta
gaattggcaattacacgatttgagagtgaagacatcacctctattgtggaacttgaaggt
ctgttagaagtcaaccgtatgagtcacaagctgctaagtaaatacttaaccctggacagt
tttgatgccatgttcagggaagccaatcacaatgtatctgcaccatatggaagaataact
ctccatgttttctgggagttgaattatgatttccttccaaactactgctacaatggttcc
acacaaaggtttgtgcgtactgtgctgcccttctctcaagagtttcaaagagataaacaa
ccgaatgcacagcctcagtatttatatggaactaaggctctgaacttggcatacagcagc
atttacagcaactacaaaaattttgtgggccctccacattttaaagcgatttgcaagctt
ctgggctatcaaggaattgctgtggtaatggaggaactgctcaaagttgttaaaagccta
ctacaaggaaccattttgcaatatgtgaagactttaatggaagtgatgcctaaaatctgc
cgtttacccagacatgagtatggttcaccaggaattctggaattctttcatcatcagctg
aaagacattgtggaatatgcggaactgaagactgtgtgttttcaaaatttacgagaagtt
ggcaatgctgttcttttctgtcttcttattgagcagagtctgtctctggaggaagtctgt
gacttgctacatgctgcaccattccagaatattttgccaagaatccatgtcaaagagggt
gagcggctcgacacaaagatgaagagactggaggctaaatatgctgcacttcatcttgtt
ccactgatagaacgacttggaacacctcagcaagttgcaattgcaagagaaggggatctg
ctgacaaaggaacggctgtgttgtggtctctccatgtttgaagtgattctgacacgaatc
cggcagtttctggatgatcccatatggcgtggacctcttccgactaatggagtaatgcat
gtggatgaatgtgtggaatttcacaggttgtggagcgccatgcagtttgtgtactgtatt
ccagtgggagcacatgagttcactgtagagcaatgctttggagatggactgcactgggct
ggctgtatgatcattacactgcttgggcagcaacgccgatttgatgtccttgacttttgt
tatcatttgctcaaagttcagaagcatgatgggaaagatgatgtcctcaaaaatgtgcct
ttgaagaaaatggttgacagaattcgcaaattccaaattctcaatgatgagatctttgct
atcttgaataagtatctgaagtcaggtgatagtgagaacgtacctgtggagcacgtccgc
tgtttccagccacctattcatcagtcgttggcaagctcatga
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