Chiloscyllium plagiosum (whitespotted bambooshark): 122550904
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Entry
122550904 CDS
T08871
Symbol
si:ch211-269e2.1
Name
(RefSeq) cohesin subunit SA-2 isoform X1
KO
K06671
cohesin complex subunit SA-1/2
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
122550904 (si:ch211-269e2.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpla03036
]
122550904 (si:ch211-269e2.1)
Chromosome and associated proteins [BR:
cpla03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
122550904 (si:ch211-269e2.1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Cnd1
Lpg0393_VPS9
WHD_SNRNP200
Motif
Other DBs
NCBI-GeneID:
122550904
NCBI-ProteinID:
XP_043548264
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Position
6:104267493..104409581
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AA seq
1199 aa
AA seq
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MMIAEPELSSKVSLQKENESHSEPDNDLENQRRGSAGSLSSWKRRRRSLSEKSRRRASVC
SHQDRRNGRCQRDDDIEAVTLFEVVRMGKSAMQSVVNDWIEEYKQDRDTALLDLIIFFIQ
CSGCKGMVTAEVFQNMHSPDIKRKMTEEFDEETGLQYKKFMVYPWILNVTWPLDLDSGDY
PLTMSGPYWKKFKSNFCEFLSVLIQHCQYTIIHDEYLMDTVISLLTGLSDSQVRAFRHTS
TLAAMKLMTALINVTLSLRVQLQNSQRQCEVEMFDKRPNRRLETFLQKKKEIIEKKENIE
NLMNAIFKGIFLHRYRDALPEIRAICIEEIGIWMKSCSDRFLTDSYLKYVGWTLHDKQSD
VRLKCLIGLLGLYSDKELCSKMDLFTCRFKDRIISMTLDKESEVAVQAIKVLTLMLENCE
EFLTSHDCEQLYQLVYSAQRPVALAAGEFLHRKLFCSLESEVQDEVPERKEKPTCNLNHL
LTLVNFYQKSEGNAQSAYLVDSLWDCSAFILKDWESMTALLLEDEDSGKEALTSLQKKAL
VEIMLSTIRQAAEGHPPGGRCLGKKIQMTKERKSQIDDRAKLTEHFFAILPQLLAKYSAD
GEKVITVNLLQIPQYFDLEGYCTAQLEKHLDTLLKQLKEIVEEQTDSEVLEFCSKTYLVL
SNEEWATQDQVDSAKHQLFDQLVTRFNRVLRDFLHKGGQFGDTESYQMWCALKRITTFHN
AHDITRWNLLNNTCKLLKRALENGNVPEQIIVQAILCSYYYIMWQLSKVSEGDSSKVQDS
VKVSLRKQMRGFCHICRQFLNNPSSTVKEQAFIILCDLLLVFSHEEPPIGSEMVEPFAYI
PEESLQTELVTFVLDHVFIARDSGHPDNDEECKVGRLHKRRNLLAAFCKLIVFSVVEMDI
AADIFKQYIKYYIDYGDIIKETLSRTRQIDKIQCAKTLIQSLKQLFNELLQGQGTSLDRW
SQQFTSIKDLARRFSLTFGLDQLKTREAMAMLHKNGIEFAFKDDNPKGKGQPPLNMAFLD
ILSEFSPKLLKTDKRTVFNYLERFVTDQMAAENGEEWLPLILYRRSLLDCRDDDTVSTNS
SDQSALSPVQAQFKSSSLKRRLQIEESNGHVGLNEEQHAKISPRSLMPQLTPVGPGEDEK
QRVHGTKEHSLETVRMQSLSSEYGTTTMENTDKLEEGVTTKLAEGDLDDVNEILDIDND
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atgatgatagcagaaccagaattatccagcaaggtctcccttcaaaaagagaatgagagc
cattcggagcctgacaatgatctggagaaccaaagaaggggaagtgcaggctccttatcg
tcatggaaaaggagacggaggagcctgtctgagaaaagcagaaggagagcatcagtgtgt
tcccaccaggaccgcaggaatggacgctgccagagggatgacgacattgaggctgtcaca
ctgtttgaagtagtcaggatgggaaaaagtgccatgcagtctgttgttaatgactggatt
gaagagtataaacaagacagagataccgcactcctggatctcatcatctttttcattcag
tgttcaggatgcaaagggatggttacagctgaggtctttcaaaatatgcacagccctgac
attaagagaaaaatgactgaggaatttgatgaggaaacaggcttacagtacaagaagttc
atggtctacccctggatcttgaatgttacctggccactagacttggacagtggagattat
ccccttacgatgtcagggccctattggaagaaattcaagtctaatttctgtgagtttctc
tctgtgctgattcagcattgccaatacactatcatacacgatgaatacctgatggatact
gtgatctccctgttgactgggctctcagactcccaggtgagagcctttcggcacaccagc
acactcgcagctatgaaactcatgacggccttaatcaatgtgactctgagtttgagagtc
cagttgcaaaactctcagcgacagtgtgaagttgagatgtttgacaaaagacccaacagg
aggctggaaacgttcttgcagaagaaaaaggagattatagaaaagaaggaaaacattgag
aatctgatgaatgcaattttcaaaggaatcttccttcatagataccgtgatgcattacct
gagatcagagctatttgtattgaagaaataggaatctggatgaaaagctgcagcgatcgc
ttcctgactgacagctacttgaaatatgtaggatggactttgcatgataaacaaagtgac
gtgagattgaaatgcctgattggtttactgggtctgtactctgacaaagagctttgttca
aagatggacctttttacctgtcgttttaaggatagaatcatatcaatgacactggacaaa
gaaagtgaagtcgctgtccaagcaatcaaggtgttaactctcatgctggagaactgcgag
gagtttttaacgtctcatgactgtgaacagttatatcagttggtttattcagcacaaaga
cctgtggctttggcagctggtgaattcctgcacaggaagttgttttgcagcctggagtct
gaagtacaagatgaagtgcctgagagaaaggaaaagcccacctgcaatctcaaccatctg
ttaacccttgttaacttttatcagaagagtgaggggaacgcacagtcagcctatcttgtt
gacagtctctgggattgttcagcattcatcctaaaggactgggagtccatgacggcttta
ttactggaagatgaagactctggaaaggaagctttgaccagcttacagaagaaagcactg
gttgaaattatgttgagcacaatacgacaggccgcagaaggccatccgcctggaggccga
tgtttaggaaagaagattcaaatgacgaaagagagaaaatcgcagattgatgatcgggcc
aagctcactgaacatttcttcgcgatacttccacagcttttagctaagtattctgctgat
ggagagaaagtaattacagtcaaccttctgcaaatacctcagtactttgacctggagggt
tattgtacggcacagctagaaaagcatttggacaccttactgaagcagttgaaggaaatt
gtagaggaacagacagattctgaagtcctggagttctgttcgaagacgtaccttgttctc
agtaatgaagagtgggctactcaggaccaagtagattctgcaaagcatcaactgtttgac
cagctggtgaccagattcaacagggtgctgagggacttcctccacaagggaggccagttt
ggtgacacagagtcttaccagatgtggtgtgcattgaaaagaatcacgaccttccataac
gctcatgatataactcgatggaatctgttaaacaacacctgcaaactgctgaagagagcc
ttggagaatggaaacgtgcctgaacagatcatcgttcaggcaatcctctgtagctattat
tacatcatgtggcagctctcgaaagtatctgaaggtgattcctccaaggtacaggatagc
gtgaaagtgtcgctgaggaagcagatgaggggattctgccacatttgcagacagttccta
aataatcccagcagcaccgtcaaagagcaggccttcatcattctgtgtgatctcctgctg
gttttcagtcacgaggaaccacccattggttctgaaatggttgagccatttgcctatatc
ccagaggagtccctgcagacagagcttgtgaccttcgtcctggatcatgttttcatcgcc
cgagacagcggtcaccctgacaacgatgaggaatgcaaagtgggcagactacacaagagg
agaaatctgctagctgctttctgtaaactaatcgtattcagtgttgtggagatggatatt
gctgctgacatcttcaaacaatacatcaagtattacattgactatggagacatcattaag
gaaacactcagcaggacgaggcagattgataaaattcagtgtgcaaagaccttaattcag
agcttgaagcagctgtttaatgagctgttgcaaggccaaggcaccagtttagacagatgg
tcccaacagttcaccagcatcaaggacttggctcgacgtttctcactgaccttcggattg
gatcagttgaaaaccagggaagcaatggcgatgctacacaaaaatggtatcgagtttgcc
ttcaaagatgacaatcctaagggcaagggtcagcctcctctgaacatggcttttctggac
atcttgagtgagttctcccccaaactgttgaaaacagacaaaagaactgtgttcaattac
ctggagaggtttgtaacagaccagatggcagcagagaatggagaggagtggcttccactg
attttgtacagaaggtctttgttggattgtagagatgatgatactgtatccacaaacagc
agtgaccagagtgcactgtctccagtacaagcacaattcaaatcatcgtctctgaaaagg
aggctgcaaattgaggagagtaatggtcatgtaggattgaatgaggagcagcatgcgaag
atctcacctcgttccctgatgcctcagttgacgcctgtggggccaggagaagatgagaag
caaagggtgcacggcacaaaggagcattcgctggaaactgtcaggatgcagtcactcagc
agtgagtatgggaccacaacaatggagaacacagacaaactggaagaaggtgttacaaca
aaattagccgagggtgaccttgatgacgtgaatgaaatattggatattgacaatgattga
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integrated database retrieval system
