Chiloscyllium plagiosum (whitespotted bambooshark): 122550940
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Entry
122550940 CDS
T08871
Symbol
tsku
Name
(RefSeq) tsukushi
KO
K08130
tsukushi
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cpla00535
]
122550940 (tsku)
Proteoglycans [BR:
cpla00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
122550940 (tsku)
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_14
LRR_RPS2
LRR_9
LRR_NXF1-5
LRR_Zer-1
LRRNT
LRR_EndoS
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
122550940
NCBI-ProteinID:
XP_043548376
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Position
6:complement(113158570..113172225)
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AA seq
359 aa
AA seq
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MAYSAWLSLVIFLLSCDDGLMTCFPGCHCEVESFGMFSSFSLTKVDCSGVGPQLTGVPIP
LDTSYLDLSSNRLKTISPLMFTGPGYTTLVSLDLSYNEIMGMPSNTFSKLRYLETLNLSH
NSLEVLEEGIFSNLPLGEIDLSANKLHDINFDIFTSKGHGKPLSVDLSDNRITTVVRSLD
KSVPNIYSLDLSENKLESVPTRYLSGVPLRYLYLGHNLISSIPENAFTGLQELTHLSLRN
LPRLMELSPNSFKGLQNLQVLDLSHCVNLKFLNVAVFGGLSSLQELYLEKSGVATLSSNI
LNYLPSIKRISVGTSLMRCGKTAKEGSFHRQFGFVQKEQTLHCLDISGSSDTEYVLKLK
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atggcttactctgcctggttgagtttggttatcttcctcctctcctgtgatgatggcctg
atgacgtgcttcccaggatgtcactgtgaagtggaaagttttggaatgtttagtagtttc
agtctgactaaagttgactgcagtggggttgggcctcagcttaccggtgtccccataccg
ttggatacctcttatctggacttatcttctaaccgcttgaagaccatctcccccttgatg
tttacaggacctggctacacaacattggtgagtctcgaccttagctacaacgagattatg
ggcatgccttccaacacgttctctaagctgagataccttgagacgcttaacttaagtcat
aattccctggaggtgctcgaagagggaatattttcaaacctgcctcttggagaaattgac
ctcagtgctaacaaactgcatgatatcaacttcgacattttcacatccaagggacatggg
aagcccctaagtgtagacctttcagacaatcgaataaccactgttgtccgaagtctggat
aaaagtgttcccaatatttatagcctagatttgtcagaaaataaattggagtctgtgcca
acacgttacctttctggtgttccactacgctatctctatctcggtcataacctcatctcc
agtattcctgagaatgctttcacgggactgcaagaactgacccacttatcgctacggaat
cttcctagactgatggaactatctcccaatagttttaaggggctgcagaacttgcaggtc
ttagacttgtcacattgtgtgaacttgaaattcttaaatgtggctgtgtttggaggcctg
agctccttgcaggagctctacctggaaaagtctggagttgcaacactgtcaagtaacatt
ttgaactacctgccttccattaaaagaatctctgttggaaccagcttaatgagatgtggg
aagacggcaaaagaaggctccttccatcgacagtttggctttgttcagaaggaacagaca
ttgcattgcttagatattagtggctcctcagacactgagtatgtcttgaaattaaaatga
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