Chiloscyllium plagiosum (whitespotted bambooshark): 122550954
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Entry
122550954 CDS
T08871
Symbol
rsf1a
Name
(RefSeq) remodeling and spacing factor 1 isoform X1
KO
K11657
remodeling and spacing factor 1
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122550954 (rsf1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpla03036
]
122550954 (rsf1a)
Chromosome and associated proteins [BR:
cpla03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
122550954 (rsf1a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PHD
WHIM1
DDT
WSD
PHDvar_NSD
Motif
Other DBs
NCBI-GeneID:
122550954
NCBI-ProteinID:
XP_043548424
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Position
6:complement(115216643..115329799)
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AA seq
1227 aa
AA seq
DB search
MAAVASKPNFAVVCSFLERYGASLELPEFTFPELEEALENKKSVPQPLVDLHLKLMRKIG
KSVSFDRWEKYLLRICLEYNNTWAWEMEKIGYTEMDAECKLGLLKYLCECQFDDNLKFKN
VLNEEEPDAMRIHPIGRDKDGLMYWYQLDQEFNVRLYTEEQDDQDGTSWRLIVRDRNELA
ETLQLLKAQIDPALLSKFIQEDGSSHTSPTPEDEENKKEIEEHLEEEVKMEETIKGQQKE
PEVTTQHLASPPTTTTPEDEAKIQTVKKETIENDSKAEQTVKPASKKTDAKGEGAKVAIE
NNLDKIHRPTEDENIAAKVQVVSLKGSGDAKGCADKLATVDRERPGVNIKVEPPDDVKEK
SSEELERALKNVKQAKLPVKKREIKLTEDYDNSVKTPLGKPLTSVREPLKEGLKVEGEAV
KQTPEEKVEGKQLMNGEIAARPQVNNHKDERVIEASSPGKVEQKKNQEPETPCSTKEEEN
GINGSSKPDSDLPTNFSQENHASRNKVEVSQNCLVKEKAVDQNLPELEKPTEEARSKCEE
GKGDSLRTKLRDKEMPDTKTATVTPAEEEHTEKLPVRRTRASLRQQLTRKTSEEEAPQKV
EQAEEKRETEPNGTRCLRRSLRISKPTVKVTENLEKKACKREEPSVPQSSDKDENHKKVE
KDSKGAKRKSKSSRRARWTKSRGRRRPQESSGESESAQEDDECSEEEEEEEEGEGPLEDD
EPCKKCGLSNHPELILLCDSCDSGYHTACLRPPLMTIPDGEWFCPPCQHKLLCEKLEEQL
QNIDVMIKKKERAERRKERLAFVGINVENIIAPKDSVTEEQEIKDYKSLERRSGRTRRSI
NYRFDEFDDAIDEAIHEDIQEAEGKGAGRGKDMANITGQSLGKDISTILAGSKESKRPTR
EAACRRKKRRRLNDLDSDSTLEEDESEEEFRISESSEEEFEISDRDSEADPASNDDEGFE
VRRGRHRKYVEPMRRSWRLRGRQVKRYSDEDEEDEEEHGESEGSSCYSDILDMRRRRSKR
NQAKKVNYREDSESEKSMKSGASRKERLRGRKRRLYITASDESSRSRSSDEEQEDERPQR
KRLNRIEDEEEEDDDEDEDEPALTSRFRGRPARDYSKKYRLMSDEEEEDLEEAGKEASSL
DCGLVVLPSTNGQSTGQASEGVISRTSEKNQMAKDTNPTPSLALNGACEAMASEAGVEAG
GDGGEEEEDDLLGVTDLVEYVCNNEQI
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtcgcctctaagcccaatttcgccgttgtctgttctttcctagagcgctat
ggcgcctcgttggaactgcccgaattcaccttccccgagctggaagaagcgctggaaaac
aaaaaatctgttcctcaaccactggtggaccttcacttgaagctaatgaggaagattggc
aagtctgtaagctttgatcgatgggaaaagtaccttctcaggatttgcttggaatacaac
aatacttgggcttgggagatggaaaaaattggatacacagagatggatgctgaatgcaaa
cttggtctcttaaagtatctctgtgaatgccaatttgatgacaatttgaaattcaagaat
gtgttgaatgaggaggagccagatgctatgcgcatccatccaattgggcgtgataaggat
ggcctaatgtactggtaccaactggaccaagagttcaatgttagactctacacagaagaa
caagatgaccaagatggcacttcatggaggctcatcgtaagggaccgtaatgaattggct
gaaacactgcaactcctgaaagctcaaatagatccagcactattaagcaagtttatccag
gaagatggctcctctcatacaagccctacaccagaagatgaagagaataagaaagaaatt
gaagaacatctggaagaagaagtaaaaatggaagagacaataaaagggcagcagaaggag
cctgaagttaccacgcagcatctagcatctccacccacaactactactccagaagatgag
gcaaaaatacagacagttaaaaaagagacaatcgaaaatgactccaaggcagagcagacc
gttaagcctgcatcgaaaaaaactgatgcgaaaggtgaaggtgctaaagtagccatagaa
aacaaccttgacaaaattcataggccaactgaagacgaaaacatagctgctaaagtgcaa
gtggtcagtctgaaaggctctggtgatgccaaaggttgcgctgataagttagcaactgta
gatcgtgaaaggccaggagttaacatcaaggtggaacctcctgatgatgtcaaagaaaag
tcgtcagaagagcttgagagagccttgaaaaatgtcaaacaggcaaaactccctgtgaaa
aaacgtgaaattaaactgactgaggactatgacaactcagtaaagactcccctcggcaag
cctctaacctctgtcagggagcctctaaaagaagggttaaaagtggaaggcgaggcagtg
aagcagacaccagaggaaaaggtggaaggaaagcagctcatgaatggtgagatagctgct
agaccccaagtgaacaatcacaaagatgagagagttatagaggcttcttctccagggaag
gttgagcagaagaagaaccaagagcctgaaaccccatgctcaactaaagaagaggaaaat
ggcatcaatggatcaagcaagccggactctgatttgcctacgaactttagccaggagaat
cacgcgagcagaaataaagttgaagtgagccagaactgcctcgtgaaggagaaagctgta
gaccagaatcttcccgagcttgagaagcctacggaggaagccagatcaaaatgtgaggaa
gggaagggagattccctcagaaccaagctacgtgacaaagaaatgcctgacacaaaaacg
gcaactgttacaccagcagaggaggaacatacagaaaagctacccgtgaggagaacaaga
gcatccttgaggcagcagttaacgaggaagacttcagaggaagaagcaccccagaaagtt
gagcaggcagaagagaaacgagagacagaacctaacgggacaagatgcttaaggaggtcg
ctgagaatatccaaacctacggtaaaagtgacagaaaacctggagaagaaagcatgtaag
cgggaagaaccatcagtacctcaaagttcggataaggatgagaaccataaaaaggtggag
aaagattcaaagggagcaaagcgcaagagtaaatccagcaggagagctaggtggaccaaa
tcaaggggcaggcgcagaccccaagaatcgagtggagagagtgagagtgcccaggaagat
gacgaatgtagcgaagaggaggaggaggaggaagaaggggaaggtccacttgaagatgat
gagccctgtaaaaaatgtggcttatccaatcaccctgaactgattctgttgtgtgattcc
tgtgacagtggttatcacacagcttgtctacgccctccattgatgacaatccctgatgga
gaatggttctgcccaccgtgccaacataaacttctgtgtgaaaaattagaagagcagttg
caaaatatagacgtgatgataaaaaagaaggaaagagcggagagaaggaaagagaggctg
gcctttgtgggaattaacgtggaaaatatcattgctccaaaagattctgtaaccgaagaa
caagaaataaaagattacaaatccttggaaaggcggtcgggtaggacacggagatctatt
aattacaggtttgacgagtttgatgatgcaatcgatgaagcaatacatgaagacatacag
gaggcagagggcaaaggtgctggacgaggcaaagatatggcaaatatcactggacagtcc
ttagggaaagatatctctactatactcgcagggtctaaagagagcaagcgaccaacacgt
gaagctgcctgtagacgcaagaaaaggcgaagacttaatgatcttgacagtgatagcacc
cttgaagaagatgagagtgaggaggagttcaggataagtgaaagcagtgaagaagaattt
gagatctctgacagagatagtgaggcagaccctgcctcaaatgacgacgagggttttgag
gttcggcgagggaggcaccggaaatacgtggagccaatgaggaggagttggcggttgaga
ggaagacaagtcaagagatattcggatgaggatgaagaggatgaagaggagcatggagag
agtgaagggtcaagttgttacagtgacatattagacatgaggaggaggcgatcaaagcgg
aaccaggctaaaaaagtgaactacagggaagattctgaatctgagaaatctatgaaaagt
ggtgcgagtagaaaggaaagacttaggggacgaaagcgtagactgtacattacagcaagc
gatgagagctccagaagcagaagttcagatgaagagcaggaagatgagcggccacaacgg
aaacgcctcaacaggatcgaggacgaggaggaggaggacgatgacgaggatgaagacgag
ccagcgctgaccagcagattccgcggcagacccgcccgggattacagcaagaagtaccgg
ctgatgagtgatgaagaggaggaggacctggaggaggcagggaaggaggccagctctttg
gactgcggcctggtagtactgccctccaccaatggacagagcacggggcaggcttcagaa
ggtgtaatcagcagaaccagtgagaagaaccaaatggccaaggacactaaccccactccc
agcctggcgctgaatggagcctgtgaagctatggcctctgaggcaggagtggaggcagga
ggtgacggaggggaggaggaagaagatgacctcttgggagtaactgaccttgtagaatat
gtttgtaataatgaacaaatataa
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integrated database retrieval system
