Chiloscyllium plagiosum (whitespotted bambooshark): 122551030
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Entry
122551030 CDS
T08871
Name
(RefSeq) protocadherin-8-like
KO
K16499
protocadherin delta 2
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cpla04515
]
122551030
Cell adhesion molecules [BR:
cpla04515
]
Cadherins
Protocadherins
122551030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
122551030
NCBI-ProteinID:
XP_043548608
LinkDB
All DBs
Position
6:complement(5134026..5145364)
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AA seq
1045 aa
AA seq
DB search
MSPGRSRSRVAVPVCSPSREPCFLLLMLLLAPILSECKTVRYSTYEEQEAGSVIGNLAAD
LQLEAAGGGQSGFRLMPECNGSVPVTVRVTVRERDGELTVASRIDREQLCGQQEPCLLLL
DVVSFSRDRFLLIHVEIQVLDINDHWPEFPQAEIELEISESSAPGTRLPLPAALDADTGS
HSVRGYELSVNGHLELELPPGDGPGAGAGDQPLPLLLLVKPLDRESQAELKLLLRARDGG
DPPRSGDARLTVRVLDDNDNAPAFESGSLELELPEDTAPGSVLLQLEARDPDQGVNGELR
YTFSPRLEAAARRLFRLEPRSGRLSLHAPLDHEARDRFELEVEARDMGARPRASSCRVTV
RVLDVNDNAPEIRVSALWPGPGGAQAAAAAASGLASITEAAEPGSFVALVSVWDRDSGAN
GRLSVSLLGPRQLELRPAYGSNHHMIVTAERLDRERHSDYNVTLVAEDQGPEPRRTVRPF
TVTVTDVNDNAPAFPRSVYRLSLAENNPPGAQLGTVRARDPDLGVNGRLTYRLLQQREPG
PGPGPGREPGPGLQPPAVAVEPHSGSLFALRPLDREELPELELLLQATDGGSPPLSGSTT
VRLVITDRNDNAPLITHPPPPLPGPAPAPPGNRSAAASKMALPGGAPRGYLAARVRAQDP
DEGPNGRLSYRIVSGDPPGLFTIRSDTGEVYLGRPLPPSASPGAGPGALRLVVAVSDGGL
PSLSSTVTLSFTVGPEPPPAAPAASPGPGQRSWDTSFTVIAVLAAGCVALLLAIVGIASS
CGTGGKPGREGDVLEPRADAARSPAPAPGELEADGASEEAAKGVCLLETQRQLTANTQES
FMPEPGVNHGAFCTVAFHQDIKTIAYPGQDVFSGKDSGKGDSDFNDSDSDLSGDGSRKGH
TIIDQKQNDVFPCHKSQTPCSSNPYYNLTSQTTECGKFTSHSKPSQMVAYSSMSTTLLHS
SSGEVTSVLQDQSLKSPRQYGHVTRLESQTSESVLSRESGRTGSSFHPPVIQRPIKATSL
AYNASGHRYQTSYLNTAHSEVATSF
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgagccctgggagaagtcgaagcagggttgctgtcccggtgtgcagtccctccagggag
ccctgcttcctgctccttatgctccttctcgctccgatcctgagtgagtgtaagacggtc
agatattccacgtacgaggagcaagaggccggctcggtgatcgggaacctggccgccgat
ctgcagctggaggcggccggcgggggtcagagcggcttccgcctgatgcccgagtgtaac
ggctcggtaccggtcacggtcagggtcacggtgagggagagggacggcgagctgacggtg
gcgagccgcattgaccgggagcagctttgcggtcagcaggaaccgtgcctgctgctcctg
gatgtggtcagcttctccagggacaggttcctgctgatccacgtggagatccaagtgctg
gacattaatgaccattggcccgagttcccccaggccgagatcgagctggaaatctccgag
agctcggccccgggcacacggctccctctgcccgccgctctggacgccgacaccggctcg
cactcggtgcggggctacgagctctcggtgaacggtcacctggagctggagctgccgccc
ggggacgggcccggggccggggccggggaccagccgctcccgctgctgctcctggtgaag
cccctggaccgggagagtcaggccgagctgaagctgctgctccgagcccgggacgggggc
gacccgcctcggagcggggacgcgcggctcaccgtgcgcgtcctcgacgacaacgataac
gctccggccttcgagagcggctccttggagctggagctgccggaggacacggccccgggc
tcggtgctgctgcaactcgaggcccgggacccggaccaaggcgtgaacggcgagctccgg
tacaccttcagcccgaggctcgaggccgccgctcgccgcctcttccgcctggagccgcgc
tccggccgcctcagcctgcacgcgccgctcgaccacgaggcgcgcgaccgcttcgagctg
gaggtggaggcgcgcgacatgggcgccaggccgcgcgcctcgagctgccgggtgacggtg
cgcgtgctggacgtcaacgacaacgcgccggagatccgcgtgagcgcgctgtggcccggg
cccgggggcgcgcaggcggcggcggcggcggcctcgggcctcgcgtccatcaccgaggcg
gcggagccgggcagcttcgtggcgctggtgagtgtgtgggaccgggactccggagctaac
ggccgcctctcggtgtcactgctcgggccccggcagctcgagctgaggccggcctacggc
agcaaccaccacatgatcgtcacggcggagcggctcgaccgggagcggcacagcgactat
aacgtgacgctggtggccgaggaccagggcccggagccccgccgcaccgtgcggcccttc
accgtcaccgtcaccgatgtgaacgacaacgcgcccgccttcccccgctccgtctaccgc
ctgtcgctggcggagaacaacccgcccggggcccagctcggtaccgtccgggcccgtgac
cctgacctgggcgttaacggccgcctgacctaccgcctgctgcagcagcgggagccgggg
cctgggcctgggcctgggcgggagccggggcctggcctgcagcctcctgccgtcgctgtg
gagcctcacagcggctccttgttcgcgctccggcccttggaccgtgaggagctgcccgag
ctcgagctgctgctgcaggcgacagacggcggttccccgccgctcagcggctccaccacc
gtccgcctggtcatcaccgaccggaacgacaacgcgccgctcatcactcaccccccgccc
ccgctcccgggcccggctccggctcctcccgggaaccgctccgccgccgcctccaagatg
gcgctgcccgggggcgcgccccgcggttacctggcggcgcgcgtgcgggcccaggacccg
gacgaggggccgaacggccgcctcagttaccggatcgtgagcggggatccgcccgggctg
ttcaccatccgctcggacaccggggaggtgtacctgggccgcccgctgccgccctccgcg
tcccccggggccgggcccggggccctccgcctggtcgtggcggtcagtgacggcggcctg
ccctccctgtcctccaccgtcaccctgagcttcacggtggggcccgagcctcccccggca
gctccggccgcctccccgggcccgggacagcggagctgggacacctccttcaccgtgatc
gcggtgctggccgccggctgcgtggccttgctgctggccatcgtcgggatcgcctcgagc
tgcggcaccggcggcaagcccggccgggagggagacgtcttggagccgcgggcggacgct
gcccgttccccggccccggccccgggcgaattggaagcggatggagcttcggaagaggcg
gcgaagggcgtgtgtctcctggaaacacagcgtcaactcactgccaacactcaggagagc
tttatgccagagcctggcgtcaatcatggagccttttgtacagttgcctttcatcaagat
atcaagaccatcgcgtatcctggacaagatgtattcagtggaaaagacagtgggaaagga
gatagtgacttcaatgatagtgattctgacttgagtggtgatggatcaagaaaaggacat
acaataatagatcaaaagcaaaatgatgtgttcccctgtcataaaagccaaacgccttgc
agttctaacccatattacaacttgacctctcaaacaacagaatgtggaaaattcacttca
cactcaaaaccgagccaaatggttgcttattcttcaatgtctacaacattactgcattca
tctagtggtgaagtcacttcagttttgcaggatcagtccttaaagtctcctcggcagtat
ggccacgtaaccaggttggaatctcaaacttctgaaagtgttttgtccagagaatctgga
aggacaggatcctcatttcacccacctgtgatacagagacccattaaagcaacttcattg
gcatataacgcttctggacatagataccaaaccagctatcttaacactgcccactctgaa
gtggctacgtcgttttga
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