Chiloscyllium plagiosum (whitespotted bambooshark): 122551144
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Entry
122551144 CDS
T08871
Symbol
edar
Name
(RefSeq) tumor necrosis factor receptor superfamily member EDAR
KO
K05162
tumor necrosis factor receptor superfamily member EDAR
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
122551144 (edar)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
cpla04050
]
122551144 (edar)
Cytokine receptors [BR:
cpla04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
122551144 (edar)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Death_EDAR
TNFR_c6
PFF1_TM
DUF3671
SCIMP
MLANA
DUF2852
Motif
Other DBs
NCBI-GeneID:
122551144
NCBI-ProteinID:
XP_043548703
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Position
6:complement(69567786..69662905)
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AA seq
470 aa
AA seq
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MIFDFSTAKHLKANKKMLHCKTLWRAYVFPLLLVSLISLVIADYSSECGENEYFNQTTGS
CHACPQCHSGEEPVSNCGYGVKDDSYGCQPCQNGKFSKGVYQICRRHKDCEGFFRATVLT
PGTVETDAECGPCIPGYYILDNRSRNTYTKVCHSCLLAPPNTKECLGITLSSSFSSSSSA
VTGNSPVLQETHKVDHAGQGHLGTALIIAMSTIFIMAIAIVLIVLFYILKTKSSTQACCS
GNSVKHIEAQINTQEDKKEVQENVVIFSEKDEFDNKLNAVPPKTEKNENDASSENEQLLS
RSMDSDEEAALDKRGMSDLCLLSLVPLTRDKSANNKASGIQTRREKILELCKKVCSYTEG
LSPTELPFDCLEKTSRMLSSTYSTDKAIVKTWRHLAESFGLKRDEIGGMTDGMQLFDRIS
TAGYSIPELLTRLVHIERMDAVEALCMDVLECTQCAPIANPVILPKCANV
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgatttttgatttctcaacagcaaaacacctaaaggcaaataaaaagatgttgcactgc
aagacgctatggcgggcatacgttttccctttactattggtatccctgatctctttagtt
attgctgactactcctcagaatgtggggagaatgaatattttaaccaaacaactgggtct
tgccatgcctgtcctcaatgtcactcaggtgaagaacctgtttcgaactgtggatatgga
gttaaggatgattcctatggctgccaaccttgccagaatggcaaattctcaaagggtgta
tatcagatctgcagaagacacaaagattgtgagggattctttcgggctactgtcttgaca
ccaggcactgtagagaccgatgcagaatgtgggccttgtatcccaggttactacatccta
gacaatagatccagaaacacctacacaaaggtttgccattcctgtttactggcacctcca
aacacaaaagaatgtttgggcattactttgtcttcaagcttttcaagcagtagctcagct
gtcactggaaactctccagttctacaggaaactcacaaagtagatcatgctgggcaagga
caccttggcactgctttgataattgccatgtccaccatattcataatggccatagccatt
gttttaattgttcttttctacattttaaagacaaagtcttctactcaagcttgttgcagc
ggcaattctgtaaaacatattgaagctcagatcaatacccaagaagacaagaaggaagta
caagaaaatgttgtaatattctccgagaaagatgaatttgataacaaactcaatgcagtt
ccacctaagactgaaaaaaatgaaaatgatgcttcctcagaaaatgagcagcttttgagt
cgaagcatggacagtgatgaggaagctgcattagacaagcggggaatgtccgatttatgc
ctcttatcattggttcctttaacaagagataaatcagcaaacaacaaagcaagtgggata
cagacgcggagggagaagatacttgagctatgcaagaaagtgtgcagttacacagaaggg
ctcagcccgacagaactaccttttgactgtcttgagaaaaccagcagaatgctgagctct
acctacagcacggataaagctattgtgaaaacatggcgtcatctggcagagagctttggg
ctgaagagggatgaaataggtggaatgacagatggaatgcaactctttgatcgtataagc
acagcaggttatagcatccctgaactgcttaccagacttgtgcatattgaaaggatggat
gctgtagaagccttgtgtatggatgttctagagtgcacacaatgtgcaccaatagctaat
cctgttatcttacccaaatgtgcaaatgtgtag
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