Chiloscyllium plagiosum (whitespotted bambooshark): 122551296
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Entry
122551296 CDS
T08871
Symbol
lcmt2
Name
(RefSeq) tRNA wybutosine-synthesizing protein 4 isoform X1
KO
K15451
tRNA wybutosine-synthesizing protein 4 [EC:
2.1.1.290
2.3.1.231
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpla03016
]
122551296 (lcmt2)
Enzymes [BR:
cpla01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.290 tRNAPhe [7-(3-amino-3-carboxypropyl)wyosine37-O]-methyltransferase
122551296 (lcmt2)
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.231 tRNAPhe {7-[3-amino-3-(methoxycarbonyl)propyl]wyosine37-N}-methoxycarbonyltransferase
122551296 (lcmt2)
Transfer RNA biogenesis [BR:
cpla03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
122551296 (lcmt2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
LCM
Kelch_4
Kelch_5
Beta-prop_ATRN-LZTR1
Kelch_6
Kelch_2
Kelch_3
RAG2
Motif
Other DBs
NCBI-GeneID:
122551296
NCBI-ProteinID:
XP_043548924
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All DBs
Position
7:complement(9489669..9516350)
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AA seq
764 aa
AA seq
DB search
MRNCVVLACGALRMRSCVVPAYRALRKRRGLSVPVAGRMMIMEEEGGVENLAFSARNKRC
RNKKQAGKDVAVQGTNDSSIVSKCSMASLGYFNDCFLKGFVNKTTRRAPLINRGYYVRAK
AVDYSLHRFLQHTASYSQRQILSLGAGFDSLYFRLKASGELKNVIVYEVDFPDVVQRKAT
LIKNKQEFMELIGCMNEIKPAWMDNLYLCGLDYKLLGIDLTEIAELDNLLMETGLNPAYP
TLLLSEVVLTYMKDASSSAVIHWAANRFSSAVFVVYEQIRPDDPFGQVMQQHFKQLNSTL
HALTQFPGKEAQRKRFLNEGWEECHCIDMNEFYTGLIPKQEKQRIEMLEPFDEYEEWHLK
CSHYLILSASKGDLKTCLFFHSLPDFHPNKLDTYDPRQISVFPCEIETENPLFKRFAHCS
SLIAPNVVLISGGFGSRVSQHGRLRDAMLMVKSGPVWKCSSVNNVGSIHLLTERMFHSMT
SFCDSRCVIFGGRTSPLKPVTSILLLKSEVGDSTISSINLSVKEVECIGTAPTPRWRHTG
TEVIYKGQRYLFIYGGRSPKDLVLNDWHFLNLEDYSWSDIPVLGPTPESRHSHSACSWRG
GVLIAGGLGATQIPLASVFHLRPMQSGFFWDRIQVTDSFIPRYSHTAHILGDKLFLLGGV
TIYTDSIPEVTVIDLKTGESLDYHIDTIWTPFTNLSETNGNDTTHNSKPRHINRKQDRTP
TLHRRLTDDVTKHGGETSGNKPTTQQANQQVDPQPELQIFSKDS
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaactgtgtagtactggcctgcggggccttgcgcatgcgtagctgtgtagtgccg
gcctaccgagccttgcgcaagcgtagggggctgtccgtgccggtggccggcaggatgatg
attatggaggaagagggaggcgtggagaatttggctttcagcgccagaaataaacggtgt
aggaataagaaacaggctgggaaggatgtggctgtccaaggtacaaatgacagcagtatt
gttagcaagtgttccatggccagtttaggctacttcaatgattgttttctgaagggattt
gtaaataaaaccaccagaagagctccacttatcaatcgtggttactacgtgagggcaaaa
gcagtggattatagtctgcatcgtttcttgcaacatacagcaagttactcacagagacag
atcctttcacttggagctggctttgattccttgtactttcggctaaaggcaagtggagag
ctgaaaaatgtcattgtgtacgaggtggattttccagatgttgttcaacgcaaagcaact
cttattaaaaacaagcaggaattcatggagctcattggctgcatgaatgaaattaaacca
gcctggatggataatttatatctttgtggtttggattacaaattacttggcattgacctg
actgaaatagcggagttagataacctactgatggagactggcctaaatcctgcatatcca
accctgttgttatcagaagttgtactgacgtatatgaaagatgcaagttcttcagctgta
atccattgggcagcgaacagattttcgtctgcagtgtttgttgtctacgaacagatacgg
ccagatgacccctttggtcaggttatgcagcagcattttaaacagttgaactccactctg
catgcacttactcagtttcctggaaaggaagctcaacggaaacgttttttaaatgagggc
tgggaggaatgtcattgtattgacatgaatgagttttatactggattaattccaaaacag
gagaaacaaagaattgaaatgttagaaccctttgacgagtatgaggaatggcatttgaag
tgttctcactatttaattctgagtgcatcaaaaggagacctgaaaacctgtctgtttttt
cattctcttccagatttccaccctaataaactagatacttatgatccacggcagatctct
gtgtttccatgtgagattgaaacagagaatcctctttttaagaggtttgcccattgttca
tcacttattgccccaaatgtagtccttatcagtggaggatttggcagcagagttagccaa
catggacgcctcagggatgcaatgctaatggttaaaagtggacctgtttggaaatgtagc
tctgttaacaatgtggggtcaatccatcttttgactgaacgaatgtttcacagcatgacg
tcattttgtgacagtcgttgtgtaatctttggtggccgcacatctccactgaagccagtc
accagtatccttttgttgaaaagtgaggttggcgacagtaccatctccagcatcaacttg
tcagtaaaagaggtagagtgcatcggcactgcgcccacaccacgctggagacacacagga
acagaagtaatttacaaaggtcagagatatctgttcatctatggtggtcgttctcccaaa
gacttggtactaaatgattggcatttcctgaacctggaagactacagttggtcagatatt
ccagttcttggacctactccagaaagccgccattcccacagtgcctgttcatggagaggt
ggtgtactaattgctggaggattaggggcaacacagatccctttagcatccgtcttccat
cttagaccaatgcagtctggatttttctgggataggatacaagtaacagattctttcatt
ccacgatactctcacacagcccatattcttggtgataaactttttttattgggaggagtg
acaatctacacagattcaatccctgaagtaactgttattgacctaaagacaggagaaagt
cttgactaccacattgacacaatttggaccccatttaccaacctctcagaaacaaatgga
aatgataccacccacaacagcaaaccaaggcatataaatagaaagcaggacagaacacca
acgcttcatcggaggctcactgatgatgttaccaaacatggtggtgaaacgtctggtaac
aaacccacaactcagcaagcaaaccaacaagtagatccacaacctgagctacaaatcttc
tccaaggactcataa
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