Chiloscyllium plagiosum (whitespotted bambooshark): 122551360
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Entry
122551360 CDS
T08871
Symbol
hdac4
Name
(RefSeq) histone deacetylase 4 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
122551360 (hdac4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpla03036
]
122551360 (hdac4)
Enzymes [BR:
cpla01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
122551360 (hdac4)
Chromosome and associated proteins [BR:
cpla03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
122551360 (hdac4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
122551360
NCBI-ProteinID:
XP_043549038
LinkDB
All DBs
Position
7:17364111..17856206
Genome browser
AA seq
1087 aa
AA seq
DB search
MMTSQSHSDGLSGRDQSIELLTPSRVNHMPSTVDISTALPSQVQPSTPMDLRLDHQFPVP
AADPNVREQQLQQELIALKQKQQIQRQLLIAEFQRQHEQLSRQHEAQLQEHIKHQQDLLA
LKHQQEILEQQRKLEQHRQEQEMEKQHREQKLMLLKNKEKGKESAVASTEVKLRLQEFVL
NKKKAAAHRAINHSIPNDPRFWYGKTQHGSLDQSSPPQSSISASYNHPMLGMYDPKDDFP
LRKTASEPNLKVRSRLKQKVAERRSSPLLRRKDGSAITTLKKRPMDVPDSACNSAPGSGP
SSPNNSSNNITTENGIAGSATNMPTESTMPHKLVTRDSSVTQLPLYTSPSLPNITLGLPA
TGPSSGASGQAEGERVGMQGLPLNTPFIAGTHLPHYIATLDKDGSSGHTPLLQHMVLLDQ
STPQSPLITGLGALPIHPQSLVGPDRVSPSIHKLRQHRPLGRTQSAPLPQNAQALQQLVI
QQQHQQFLEKHKQQFQQQQIHINKLMPKPSEQPRQHESHPEETEEELREHQAMPEEPYSD
RSVNQNESTIMNKVVQVKQEPIESDEEEDEQREQLEQRKRQAEQQQELLFRQQALLLEQQ
RIHQLRNYQASMEAAGIPVSYSGHRPLSRAQSSPASATFPISVQEPPSKPQFTTGLVYDT
LMLKHHCTCGNTNSHPEHAGRIQSIWSRLQETGLRSKCECIRGRKASLEELQVVHSEQHA
LLYGTNPLNRQKLDSKKLLGSVTPMFVMLPCGGLGVDSDTIWNEIHSSSAARLAVGCVIE
LVFKVATKELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIATKLLQQRLNVSKILIVDWD
VHHGNGTQQAFYSDPNVLYISLHRYDDGNFFPGSGAPDEVGTGAGIGFNLNMAWTGGLDP
PMGDAEYLTAFRTVVMPIANEFAPDMVLVSSGFDAVEGHPAPLGGYKVSAKCFGYLTKQL
MGLAGGRVVLALEGGHDLTAICDASEACVSALLGNELEPFTQEVLQQRPNPNAVRSIENV
IEIQSKYWKSLQRFSSTVGYSLIEAQKCDKEEADTVTAMASLSMGVKQGSNAEKRPDDEP
MEEEPPM
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgatgacctctcaaagccattcagatggactttccggtcgagatcagtcgattgagttg
ctgaccccttccagagtcaatcacatgcccagtactgttgatataagcacagcattgcct
tctcaagtccagcccagtacaccaatggatcttcgccttgaccatcaatttccagtgcca
gctgctgaccccaacgtacgagaacagcaactacaacaagaactcattgctctgaaacaa
aaacagcaaatccaacgtcagcttctaatagcagaatttcagagacaacatgagcagctc
tcacgacaacatgaagcccaactgcaagagcacataaagcaccagcaggacttgcttgca
ttgaagcaccaacaagaaattttggaacaacagcgtaaactagagcagcatcgtcaggag
caggagatggagaaacaacaccgagaacagaaactcatgctgctaaagaataaagagaaa
ggaaaagaaagtgcagtagcaagtacagaagtgaaattgagacttcaggagtttgtcctg
aataaaaagaaagccgcagcacacagggcaataaatcattccattccaaatgacccaaga
ttttggtacggaaaaacccagcatggctcattagaccagagttcgccacctcaaagcagc
atatctgcctcatacaatcatccaatgctagggatgtatgatcccaaagatgactttccg
ctcagaaaaacagcatctgagccaaacttaaaggtacgctccagattaaaacagaaagtg
gcagagagaagaagtagccctttacttcgaagaaaagatggcagcgccataaccacactt
aaaaagagacccatggatgttccagattcagcttgtaacagtgcccctggatctggccca
agctcccccaataatagctccaacaacatcactacagaaaatgggattgcaggatcggca
accaacatgccaaccgagtccacgatgcctcacaaactggttactcgagatagttcagtg
acccaattgcctctgtatacttcaccatctttgcccaacataactctaggtctgccagct
actggtccctccagcggagcctctgggcaagcagaaggtgaaagagtgggcatgcaagga
ctcccattgaacactccatttattgctggtactcatctgccacattacattgccacgttg
gataaagatggcagtagcgggcatacacctctcttgcagcatatggtcttattggatcaa
tctacaccacagagtccactcataactggattgggagcgttacccattcacccgcaatca
cttgttggccctgacagagtttcgccttccatacacaagcttagacagcaccgtccgtta
gggaggactcagtcagcgccgttgccacagaatgcacaggccttacaacagctggtcata
cagcagcaacatcagcagttcctggagaaacacaaacagcagttccagcaacaacagatt
cacattaacaagttgatgccaaagcctagcgaacagcccaggcaacatgaaagtcaccct
gaagaaactgaagaggagctccgagaacatcaggccatgccagaagaaccatactcagac
agaagtgtcaatcagaatgagtctacaattatgaacaaggtggtacaggtcaaacaagag
ccaattgaaagtgatgaggaagaggacgagcagcgagaacagctggagcaaaggaagagg
caggcagagcaacagcaggaactactcttcagacagcaagcacttcttctggaacagcaa
cgtattcatcagcttcgcaattaccaagcgtccatggaagctgcagggatcccagtatca
tacagcgggcaccgtccactctcccgagcacaatcatcacctgcttctgccacctttcct
atctctgttcaagaaccacccagtaaacctcagttcactacaggtcttgtatatgataca
ctgatgctaaaacatcattgtacctgtggaaatacaaacagccatccagaacatgctggc
agaatccagagtatctggtctcggctccaagagacaggcctacgcagcaaatgtgagtgt
atcagaggaagaaaagcatctctggaggagctacaggtcgtccattcggagcagcatgca
ttactttatggcacaaacccactgaacagacagaagcttgacagtaagaaactgctaggt
tctgtcactccaatgtttgttatgcttccttgtggcggtcttggagttgacagtgataca
atttggaatgagatacattcatccagtgctgcacgcttagcagtgggctgtgtgattgaa
cttgttttcaaagtggcgactaaggaattaaagaatggatttgcagttgtaaggcctcct
ggacaccatgcagaagagagcacaccaatgggattctgctacttcaattctgtggccatt
gctactaaactcctccagcagaggttgaatgtcagcaaaatccttatagtggactgggac
gtgcaccatggcaatggaacacagcaggcattctacagtgaccccaacgtgttgtacatt
tcgttgcatcgctatgatgatggcaacttcttccctggtagtggagccccagatgaggtt
gggaccggtgcaggaattggatttaatctcaacatggcctggactggaggtctggatcca
ccaatgggagatgctgaatatttgactgcatttaggacagtagtgatgcccattgctaat
gagtttgcccctgatatggtacttgtatcctctggatttgatgcagtggaaggacaccct
gcccctcttggaggttacaaagtctccgctaagtgttttggctaccttaccaaacagctg
atgggtctggctggaggccgtgtcgtgctagccctggaagggggccatgatctcactgcc
atttgtgatgcctcagaagcatgtgtttctgctttacttggaaatgagcttgaaccattc
acacaagaagtgttgcagcaaagaccaaatcccaatgctgttcgttccattgaaaatgta
atcgaaatacaaagtaaatactggaagtcgttacagcgcttttcctcaactgtgggctat
tcactgatagaggcccagaagtgtgataaggaagaagctgacacagtgacagcaatggct
tcattgtcaatgggggttaaacaaggatctaatgctgagaagaggccagatgatgagccc
atggaggaagagccaccgatgtag
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integrated database retrieval system
