Chiloscyllium plagiosum (whitespotted bambooshark): 122551398
Help
Entry
122551398 CDS
T08871
Name
(RefSeq) double-stranded RNA-specific editase 1-like isoform X1
KO
K13194
double stranded RNA-specific editase B [EC:3.5.-.-]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpla03041
]
122551398
Spliceosome [BR:
cpla03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
122551398
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
122551398
NCBI-ProteinID:
XP_043549158
LinkDB
All DBs
Position
7:21622636..21945117
Genome browser
AA seq
779 aa
AA seq
DB search
MASLLAATVNMGTFIHLVRRKFKRRRRKRSEKKGSQNKSMAEDKSLGYQQLRSQQNCFTQ
DLDDEDGENMNPTTKACKLLFLGTTGSCSTDVKENRNLENISVKEGTQAPGEAQLSNGSN
SSINRKRPLEEGNNGHSHPKFRAKKRKKTPGPILPKNALMQLNEIKPGLQYKLLSQSGPV
HAPVFIMAVEVNGQSFEGSGSTKKKAKLHVAEKALRSFVQFPNASEAHLAMGRMLHVNTD
FTSDHSDFPDTLFNGFETPVQGDDPYLLGSNGDGPFSSGDSNSFGVSCGVEGSSIGQSTL
MAPSPFAMTSGKNPVMILNELRPGLKYEFISESGESHAKNFIMAVTVDGRTFEGSGRNKK
LAKARAAQGALQTLFNMQLDSTPSRQPIPSEGLQLHLPQVLADAVARLVVDKFSELTDNF
TSPHARRKVLAGVVMTTGSDVKDAQVICVATGTKCINGEYMSDRGLALNDCHAEIVARRS
LIRFLYSQMEYHLSNKTEDHYKSIFVKCDGGGFKLNENVQFHLYISTSPCGDARIFSPHE
AAVEDQGDKHPNRKARGQLRTKIESGEGTIPVRSSSTIQTWDGVLQGERLLTMSCSDKIA
RWNVLGVQGALLSHFMEPVYFASIILGSLYHADHLSRAVYQRISEIEDLPSIYILNRPLL
SGISNTESRQPGKAPNFSVNWVVDDSGLEVINAMTGKDDMGRPSRLCKHVLHSRWLRLHG
KLPFLNRSKQEKFTSYYEAKQAATEYQTAKESLIKEFQRSGLGMWVKKPIEQDQFSLSG
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atggcttcactgctggctgcgacagtcaatatgggcacttttattcatttggtcaggcgc
aagttcaaaaggcgtcgaaggaagcggtcagaaaagaaaggaagccaaaacaaatccatg
gcggaagataaatcacttggctatcaacagttaagaagccagcaaaactgttttacccag
gatctggatgatgaggatggtgaaaatatgaatcctacaacgaaggcgtgtaagttgctc
tttctgggcaccacaggttcatgcagcactgacgtaaaagagaaccgtaatctggagaac
atctctgttaaagaaggcactcaagctccgggtgaggcacagctttcaaatggcagcaat
tcctccattaacagaaaacggccactggaagagggaaataatggtcactctcatcctaag
tttcgtgccaagaagaggaagaaaacgcctggccccattctaccaaagaacgcattaatg
caattaaatgaaattaaacctggcctccagtacaaactcttatctcaatctggccctgtc
catgctcctgtttttatcatggctgtggaagtcaatggacaaagctttgaaggatctggg
tccaccaagaaaaaggccaagttgcatgtagcagagaaagccttgaggtcatttgttcag
tttccaaatgcctctgaggcccacttggcaatgggtcgaatgctgcatgttaatacggat
tttacatcagatcattctgactttccagatactctttttaatggatttgaaaccccagta
caaggagatgatccttatctcttgggctccaatggagatggtcctttcagttcaggtgac
tctaactcttttggcgtctcatgtggtgttgaaggcagtagtataggtcagtcaacactg
atggctccatctccttttgcaatgaccagtggtaagaacccagtaatgatcctgaatgaa
ctgcgcccaggactcaaatatgagtttatttcggagagtggagaaagccatgcaaagaat
ttcatcatggcagtaactgtagatggtcgaacctttgaagggtccgggaggaataagaag
ttggcaaaggctcgtgctgctcaaggagctcttcagactctgtttaacatgcaactggat
tcaacaccatcacggcaacccattcccagtgaaggtcttcagcttcacctgcctcaggta
ttggcagatgcagtggctcgattagtggtggataaattcagtgaactaaccgacaacttc
acctcccctcatgcacggaggaaagttcttgctggtgttgtcatgacaacaggatctgat
gtcaaagatgcccaggtgatatgtgtcgccacaggaactaaatgcatcaatggcgagtat
atgagtgaccgaggcttggctctgaatgattgtcatgctgaaattgttgcacgcagatcc
ctgatccggtttctctattcccaaatggagtaccatttaagtaacaagacagaagaccac
tacaaatccatctttgttaagtgtgatggaggaggcttcaaacttaatgagaatgtgcag
tttcacttgtacatcagtacgtcaccatgtggagacgctcgcatcttctcaccacatgag
gcagcagtagaagatcagggagacaagcacccaaatcggaaggcacgaggtcaactaagg
acaaaaatagagtctggcgaagggacgattccagttagatccagcagcactattcagaca
tgggatggagtgttgcagggcgaacgattgctcacaatgtcatgtagtgataaaatagca
aggtggaatgtccttggggttcagggagctctactaagccactttatggagcctgtctat
tttgccagcatcatcctcggtagtttgtaccatgctgaccacttgtctcgagcagtctac
cagagaatcagtgaaattgaagatctcccaagcatttatattctcaacaggcctttactt
agtggtattagcaacactgaatcacgccaaccaggcaaggcaccaaatttcagtgtcaat
tgggttgtggatgactcaggcctggaagttattaatgccatgacagggaaagatgatatg
ggacgcccttctcgactttgtaaacatgttctgcatagtcgttggttacgcctgcatgga
aagttgcccttcttaaatcgatccaaacaagagaagttcacttcgtattatgaagcaaaa
caggccgccaccgaatatcaaactgcgaaggagtccctgatcaaagagttccaaaggagt
ggattaggcatgtgggtgaaaaaacccattgaacaagatcaattcagtctctctggctga
DBGET
integrated database retrieval system
