Chiloscyllium plagiosum (whitespotted bambooshark): 122551499
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Entry
122551499 CDS
T08871
Symbol
itga4
Name
(RefSeq) integrin alpha-4 isoform X1
KO
K06483
integrin alpha 4
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04510
Focal adhesion
cpla04512
ECM-receptor interaction
cpla04514
Cell adhesion molecules
cpla04672
Intestinal immune network for IgA production
cpla04810
Regulation of actin cytoskeleton
cpla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122551499 (itga4)
04514 Cell adhesion molecules
122551499 (itga4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122551499 (itga4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
122551499 (itga4)
04810 Regulation of actin cytoskeleton
122551499 (itga4)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
122551499 (itga4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cpla04147
]
122551499 (itga4)
04515 Cell adhesion molecules [BR:
cpla04515
]
122551499 (itga4)
04090 CD molecules [BR:
cpla04090
]
122551499 (itga4)
Exosome [BR:
cpla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122551499 (itga4)
Exosomal proteins of other cancer cells
122551499 (itga4)
Cell adhesion molecules [BR:
cpla04515
]
Integrins
Integrin alpha subunits
122551499 (itga4)
CD molecules [BR:
cpla04090
]
Proteins
122551499 (itga4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_1
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_3
FG-GAP_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
122551499
NCBI-ProteinID:
XP_043549412
LinkDB
All DBs
Position
7:complement(40902243..41120149)
Genome browser
AA seq
1049 aa
AA seq
DB search
MRRERFVGSFDWGDIWMHLLLCCLFRTGTLYNLDSENPVLVKGPAGTLFGYSVLLHSYRD
EKWCVVGAPKANTSFGDTVSPGIIYKCRIDHNANQTCEELHLGIPEGKSCGPDCKEEKDN
QWLGVSLSRQPKKEGYILACAHRWKNVYYQASDKRPLGLCFKIPTDLQPSQDLPLIPCFR
ECRWNDNEKGRCQAGIASFLTEELIIMGAPGSRFWTGTVAVKNEKTDSLLFYKDDENIVQ
YGSYLGYAVSAGHFTSPNSTEIVGGAPQQELTGQVYIFEQHEQTLKIIFTAKGKMLGSYF
GSSVCAVDLNSDGLSDLLVGAPMYSIIREEGRVYVYLNTGLGVMKELAMELVGRNSYAAR
FGEAIVDLGDINDDGHADIAIGAPQEEDQQGAIYIYNGNEEGILSIFSQRIHGLRINNAL
RAFGQSISGGIDIDNNGYSDVAVGAFMSDTVVLLRSRPVVVLDAFLQLPPSINRTKMECF
ENGKPVVCINVSVCFSNKGKKIPGHIVLRYNISTDVKRRNGFPSRFILISDGNLTTSSGQ
IALYHNIIKCNAHQALMRREVRDILTPVYFEVSYFLEKHITKNESTDAFRPLQPVLQKKG
NQTNEVKNKTYFERYCAFENCSANLQVSGKLLLTGSQVNKSYLAVQEAEKVVLNVLLFNA
GDDAYSTTLTVKFPKDLHFIKIVEVVEKHVMCNIVSDENSTSLECIIGHLYLDFLSKVEL
NVFLDASSFTRAEEDIVITVNATCENEESLELLEDNFITLNMPLKYEVNVALHGSVYPPS
FLYEGVTDDDTMTFTFNDPPCTYQNVNYSFQVTNMGNSIAPGLELQITQPNTLRTNDFKL
FEILDVKTDKGECRFEHYVANCAEMQNVTIFHQVFNFFKKLGRKVLSCFRHGISCLSITC
QLGDIEHGRAVSIHVAMRLNYAFLASDSAASTIFTTEAVASSGQNPKVIEKGGGTSITVI
MEAIYNTKPKFKVAVLTFGLSLLLGILILATFIFMLCKCGFFKRSLKTKLNKEMRKTNLE
EIWMPISQEENDDNLIDETLACKSILRKT
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgagacgggaaaggtttgtggggagttttgactggggtgatatttggatgcacttgctt
ctgtgctgtttattcaggacggggacgctgtacaatctggattcggaaaatcctgtactg
gtgaaaggacctgcagggacattgtttggttattcggtactgttacacagttacagagac
gaaaagtggtgtgttgttggtgctccaaaagcaaatacatccttcggtgatacagtaagc
cctggaattatttacaaatgccgaatcgaccacaatgctaatcaaacttgcgaagaacta
catttaggtattcctgaaggaaaatcatgtggacctgattgtaaggaagaaaaagataat
cagtggcttggtgttagtttgtcaagacagccaaagaaagaaggttacatactggcctgt
gcgcatcgctggaaaaatgtatactaccaggcatcagataaacggcctcttgggttatgt
tttaaaattccaactgacttgcaaccttctcaagatttgccactgataccatgttttaga
gaatgtcgatggaatgataatgaaaaaggaagatgtcaggcaggaattgctagctttctg
actgaggagttaatcataatgggagctcctggatctcgtttctggactggaactgttgct
gtcaaaaatgaaaagacagattctttgctcttttacaaagatgatgaaaatatagttcaa
tatggaagctacctaggttatgctgttagtgcaggacactttacttctccaaacagcaca
gagattgtaggaggggcacctcagcaagaattaactggtcaagtctacatttttgaacag
cacgaacagactttgaaaatcattttcacagcaaagggtaaaatgcttggttcatacttt
ggctcatcggtttgtgcagtggatctgaattcagatggcctctcggatctgttagtggga
gcccctatgtacagcataatcagagaggaaggaagggtgtatgtctacttgaatacagga
ttgggagtgatgaaggagctggcgatggagttagttggaagaaattcttatgcagcaaga
tttggagaggcaatcgtcgaccttggagatattaatgatgatggacatgcagatatagca
attggagcaccccaagaagaggatcagcagggagctatttatatttataatggaaatgag
gaggggatattgtccatcttttctcaacgaatccacggactacggattaataatgctttg
cgtgcatttggccaatccatctctggaggtatcgatattgataataatggttattcagat
gtagctgttggagcctttatgtctgatactgttgtgttgctcaggagcaggcctgttgtg
gttcttgatgctttcctgcagctacctccttcaatcaatcgtacaaaaatggaatgcttt
gagaatgggaagcctgttgtatgcatcaatgtttctgtgtgctttagtaacaaaggaaag
aagattcctggtcatatagtgttgcgctacaacataagtacagacgtcaaaaggagaaat
ggttttccttcgagatttatcttaatatctgatggcaacttgactactagttcaggacaa
attgcactctatcacaatatcattaaatgtaacgctcatcaagcacttatgaggagggag
gtcagggatattttgacaccagtttactttgaagtatcatatttcctggaaaaacatatt
actaagaatgaatcgacagatgctttccgaccactccaacctgttttgcagaaaaaagga
aaccaaacaaatgaagtcaaaaataagacctattttgagcgatattgtgcatttgaaaat
tgttctgctaacctccaggtttctggaaaactgctgctaacagggtcccaagtaaacaaa
tcctatctggcagttcaagaggcagagaaggttgttttgaatgtattgctattcaatgca
ggggatgatgcatactcaacaactctcactgttaaatttcccaaagacttacatttcata
aaaatagttgaagtggtggagaagcatgtaatgtgtaatattgtcagtgatgaaaattca
acaagtctggaatgcatcatcggacatttgtatctcgattttttatcaaaggtggaatta
aatgtttttctagatgccagtagcttcaccagagcagaggaagacattgtcatcactgtt
aatgcgacttgtgaaaatgaagagagtctggagttacttgaagataactttattactctg
aacatgcccttaaaatatgaggttaatgttgctctccatggatccgtatatcctccctca
tttctgtatgagggggtaacagatgatgacacaatgacatttactttcaatgatccacct
tgcacatatcagaatgtcaattattcattccaggttactaacatggggaacagcattgct
cctggtcttgaactacaaattacacagcccaacacactgcgaacaaatgacttcaagttg
tttgaaattcttgatgtaaagactgataaaggagaatgtcgatttgaacattatgtggca
aactgtgctgaaatgcaaaatgtaacaatatttcatcaagtgtttaattttttcaagaag
cttggaagaaaagtactgtcctgtttcagacatggaatttcctgtttaagtatcacatgc
cagttaggagatattgaacatggaagagctgtatccattcatgttgcaatgagactcaat
tatgcatttttggcatcggattctgctgcttcaacaatttttactacagaagctgtggca
tcatcagggcagaatcccaaagttattgaaaaaggaggaggcacaagtataactgttata
atggaagcaatttataatactaaaccaaaatttaaagtagcagtattgacttttggactg
agtttgttattggggattttgatattggctacattcatttttatgctttgtaagtgtgga
ttctttaaaagatctttgaaaaccaaactaaataaagaaatgagaaaaacaaatctggaa
gaaatttggatgccaataagtcaagaggaaaatgatgacaatttaatagatgaaacactt
gcatgcaaatcaatattaagaaaaacgtga
DBGET
integrated database retrieval system
