Chiloscyllium plagiosum (whitespotted bambooshark): 122551629
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Entry
122551629 CDS
T08871
Name
(RefSeq) TRAF family member-associated NF-kappa-B activator-like isoform X1
KO
K12650
TRAF family member-associated NF-kappa-B activator
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04140
Autophagy - animal
cpla04621
NOD-like receptor signaling pathway
cpla04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122551629
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
122551629
04622 RIG-I-like receptor signaling pathway
122551629
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Ortholog
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GFIT
Motif
Pfam:
TBD
Rootletin
TMF_TATA_bd
WIP_coiled_coil
zf-WIZ
Dzip-like_N
DUF641
MTUS1_CCDC69_CC2
SfNPV_sf27
PDH_C
TPR
DUF2397
MksF
Zn-C2H2_12
DUF1129
LMBR1
ERM_helical
ATG16
Csm1_N
Motif
Other DBs
NCBI-GeneID:
122551629
NCBI-ProteinID:
XP_043549790
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All DBs
Position
7
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AA seq
498 aa
AA seq
DB search
MIFCVRNIDLVNMDKNNLGEQLNRAFEAYRQACMERDNIKKVSEQKIYELEQELAIKDQT
ITKLQLQSASATPRGNIPGQAQCLNPWPQSDLLTVRRNEAQHLVTCDSPDELIVALERER
HCKERLTTENSRLEEQIKDYQQKLKELKKSIEEKDEEFRQLRNELIEHTDFFTHGKQLYC
KPESKVNRKMAESSSKNAVPLTGTDHPLYKERLDFAFQEICQEFKQLSALTKKQTELLSK
YNYSKEAINMPFSMPIQCTDEGEQEHVAEHFVGKDKSVSKSSAVLQEGYRMQQEHLQVVE
SLSELDIRFPPSDNDYDFLNSAPEKTRPKTAFEDPIRKVDEALMQGDIQDLKDKNREECT
LFETFPVGPTNKTKPNPFGDEQGKIANINTSVGTAVDNSTLRSPSSPSFLQPSKSFPNAE
SHQMISTEATVIRGPQHPVWYPYHNKEGELLHQASKDSDPDLNSKTCEFCQEVFPAGTKA
KEDFLRHLNSHFIAKNGF
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgatattttgtgttcgtaatattgatttggtaaatatggataaaaataatcttggagag
cagctcaacagagcatttgaagcttatcgtcaggcatgtatggagagagacaacatcaaa
aaagtatcagaacaaaagatttacgagttagagcaagaactggcaataaaagatcaaacc
attacaaaattacaattgcagtctgcttctgccacccccagaggcaacattcctggacaa
gctcagtgtctgaacccttggccacagagtgacttgctgacagtgagaagaaatgaggca
caacacctagtaacatgtgattcaccagatgaattgatagtagcattagaaagggaaaga
cactgtaaggaaaggttaacaactgaaaatagtaggttggaagaacagataaaagattat
cagcaaaagctaaaagaacttaaaaaaagcattgaagaaaaagacgaagaattcagacaa
ctgagaaatgaattaatagaacacactgacttcttcacacatggtaaacagctctactgt
aaaccagagtcaaaggtaaaccggaagatggctgaatcatcatcgaagaatgctgttcct
ctgacagggactgatcatcctctgtacaaagagaggttggactttgcttttcaggagatt
tgtcaagaatttaaacaactatctgccttaacaaagaaacaaacggaacttctgagtaaa
tataactacagcaaagaagcgataaatatgccgttctcaatgcctatacagtgtactgac
gaaggagagcaagaacatgtagcagaacattttgttggcaaggacaaaagtgtatctaaa
agctctgctgtgttacaagaagggtatagaatgcaacaggaacatcttcaagtagttgag
tctctgtctgaactagatatcagatttccgccttctgataatgactatgatttcctaaac
agtgcaccagaaaaaacaagaccaaaaactgcttttgaagatcccatacgtaaagttgat
gaagcactgatgcaaggtgatatccaggacttgaaagataagaatagggaagaatgcact
ttatttgaaacgtttcctgtgggaccaactaataagacgaaacccaacccttttggtgat
gagcaaggaaagattgcaaacattaatacttctgtaggtactgcagttgataacagcaca
ttgagaagtccttcaagcccctcatttcttcaaccttctaagtcttttccaaatgctgaa
tctcatcaaatgatttcaacagaagcaacagtgatcagaggtccgcaacatcctgtgtgg
tatccataccacaataaagagggtgaattactgcatcaagcatccaaagactctgacccg
gacctaaactccaaaacctgtgaattctgtcaggaagtcttcccagcaggcaccaaagct
aaggaagacttcctcaggcatcttaattcacactttattgctaaaaatggattttaa
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