Chiloscyllium plagiosum (whitespotted bambooshark): 122551664
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Entry
122551664 CDS
T08871
Symbol
itgb5
Name
(RefSeq) integrin beta-5 isoform X1
KO
K06588
integrin beta 5
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04145
Phagosome
cpla04148
Efferocytosis
cpla04510
Focal adhesion
cpla04512
ECM-receptor interaction
cpla04810
Regulation of actin cytoskeleton
cpla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122551664 (itgb5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
122551664 (itgb5)
04148 Efferocytosis
122551664 (itgb5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
122551664 (itgb5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
122551664 (itgb5)
04810 Regulation of actin cytoskeleton
122551664 (itgb5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpla04131
]
122551664 (itgb5)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cpla04515
]
122551664 (itgb5)
Membrane trafficking [BR:
cpla04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
122551664 (itgb5)
Cell adhesion molecules [BR:
cpla04515
]
Integrins
Integrin beta subunits
122551664 (itgb5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
EGF_Teneurin
vWA_SIBA-E
EGF_TEN
DUF2975
Motif
Other DBs
NCBI-GeneID:
122551664
NCBI-ProteinID:
XP_043549888
LinkDB
All DBs
Position
7:complement(66025277..66161576)
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AA seq
806 aa
AA seq
DB search
MQKAMFKKMSLTYLFLPNLVFYLLLQDVSGSNICTSGRATSCKECLLIHPDCGWCVQEEF
GNKGSFSSRCDFRESLIKRGCSIHFIESPQSSIQIERNLPLSNKGSGSSQSDVIQLAPQR
IALTLRPDHETTFRMQVRQVEDYPVDLYYLMDLSLSMKDDLDNIRVLGTTLSREMAKLTS
NFRLGFGTFVDKPTSPFSYTGPKYQNNPCVGYKLFPQCVPSFGFRHLLSLTDKSDKFNAE
VQKQMVSRNRDAPEGGLDAILQAAVCKKKIGWRKEASHLLVFTTDDVPHIALDGKIGGLV
QPNDGQCHLDENNEYTSSTQMDYPSLALLGEKLAENNIHLIFAVTQSHYILYKNFTALIP
GTTVEILDKDSKNIIQLIVNAYSSIRSKVELTVGDQPKDIELSLTATCQDGVSRPGVRKC
GDLKIGDTVSFDVTVEARSCLEAQTRNSFTIKPVGFKDSLSITFGYICNCDCTSGMQASS
SKCNGNGTYECGICKCDPGFLGANCECQDGETSNVFQTFCHEAEGRPICSGRGECSCNQC
VCYESEFGRIYGTFCECDDFSCARHKGILCSGHGDCHCGECKCHASWIGDNCNCSTEMDS
CLSDDGQMCSGRGNCACGRCSCTEPGAFGDTCEKCPTCPDACGMKRECIECRLFNSGRLA
DNQTCQKLCKDEILTVDVLKTDDQDAVLCLYKTENDCVMRFTYSEHDSGKSVLTALKEPE
CASETDPVTVLIAVVGSILTVGIVLLAIWKLIVTIHDRREFARFQNERSRARYEMATNPL
YRQPITTHTVEILSTMHNISYNGIVD
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaagccatgttcaagaaaatgagtttaacttatttgtttttaccgaatctagtt
ttttacctgttgttgcaagacgtcagcggttccaatatttgtacaagtggacgtgctacc
tcctgcaaagagtgtttgcttattcatcctgactgtggctggtgtgttcaagaggaattt
ggcaacaagggaagcttctcatcaagatgtgactttagggaaagtttgattaaaagagga
tgcagtattcactttatagaaagccctcaaagcagcatacagatagaaagaaacttacca
ttgagcaataagggatcaggatcatcgcaatcagatgtcattcaacttgcacctcaaagg
attgcactcacactaagaccagaccatgagacaacatttcgtatgcaagtacggcaggtg
gaggattaccctgtggatttgtactatcttatggatctttccctctccatgaaagatgat
ttagacaacatccgtgtgctgggtacaacattatcccgagagatggcaaagctcaccagc
aactttcgtctgggctttggaacgtttgttgacaagccaacatcaccattttcttacaca
ggaccgaaataccagaacaacccatgtgtaggatataagctgtttccacaatgtgttcca
tcttttggattccgtcacttgctatcactgactgacaagtcagacaagttcaatgcagaa
gttcagaagcagatggtatctcggaatcgtgatgcaccagagggtggacttgatgcaatc
ctgcaggcagccgtttgcaagaaaaaaataggctggcggaaggaggcttcccacttgctg
gtatttaccacagatgatgtaccgcatattgcattggatggcaagattggtggtctggta
cagcccaatgatggacagtgccatctcgatgaaaataatgagtacacttcctcaacacaa
atggattacccatcacttgcacttcttggagaaaagttggcagagaacaacatccatttg
atatttgctgttactcagtcccattacatactttataagaattttactgctttgatccct
ggaacaactgtagaaattcttgacaaggattcaaagaatataattcaactgattgtcaat
gcttacagtagtattcggtccaaggttgaactgacagtaggggaccaaccaaaagacatt
gaactttccttgacagccacatgtcaggatggtgtttcacgccctggtgttagaaagtgt
ggtgatcttaaaattggagacacggtgtcttttgatgtcactgtagaagctaggagctgc
ctggaagcccagaccagaaatagcttcaccattaagccagttggcttcaaagattcactg
agtataacgtttggttatatttgcaactgtgactgcacaagtgggatgcaagccagcagc
tccaagtgcaatggtaatggaacctatgagtgtgggatctgtaagtgtgatccaggcttt
ctgggagccaattgtgaatgccaggatggagaaaccagtaatgtattccagacgttctgc
catgaagcagagggaagaccgatctgcagtggcagaggggaatgcagctgcaaccagtgt
gtctgctatgagagtgagtttggaaggatttatgggactttctgtgaatgtgatgacttc
tcatgcgcgaggcacaagggcatactctgttcagggcatggagactgtcattgtggtgaa
tgcaagtgtcatgccagctggattggagacaactgcaattgttcgacagaaatggactcg
tgcctgtcagatgatgggcaaatgtgtagcggtagaggaaactgtgcatgtggccgatgt
tcatgcactgaacctggagcatttggggatacctgtgagaagtgcccaacctgccctgat
gcctgtggcatgaaaagggagtgtatagaatgtagattgtttaattctgggaggctggct
gacaatcagacttgtcaaaagctctgcaaagatgagatcctgactgtggatgtcctcaaa
acagacgatcaggatgcagttctctgtctgtacaagactgaaaatgactgtgtcatgagg
tttacttattcagaacacgacagtggaaaatctgttcttactgctttaaaggaaccagaa
tgtgcaagtgaaactgatccagtaaccgtattgatagctgtagttggtagtattttgaca
gtgggcattgttttgcttgccatttggaaactgattgtcactattcatgatagaagagag
ttcgccagatttcaaaatgaaaggtccagagcccgatatgagatggcaaccaatccactg
tacagacaacccataaccacacatactgtggagattctttcaacaatgcataacatatct
tacaatggtatagttgactga
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